RNA–Protein interactions for RNA: ENST00000355192.7

MSRB3-202, Transcript of methionine sulfoxide reductase B3, humanhuman

TSL 1 (best) BASIC

Gene MSRB3, Length 4,289 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-202ENST00000355192 URB2Q14146 1524 aaKnown RBP17.14■□□□□ 0.33
MSRB3-202ENST00000355192 RARSP54136 660 aaKnown RBP17.13■□□□□ 0.33
MSRB3-202ENST00000355192 FAM13BQ9NYF5 915 aa17.13■□□□□ 0.33
MSRB3-202ENST00000355192 AMPHP49418 695 aa17.13■□□□□ 0.33
MSRB3-202ENST00000355192 CCDC141Q6ZP82 1450 aa17.13■□□□□ 0.33
MSRB3-202ENST00000355192 MAGI1Q96QZ7 1491 aaPredicted RBP17.13■□□□□ 0.33
MSRB3-202ENST00000355192 PRKAR2BP31323 418 aa17.12■□□□□ 0.33
MSRB3-202ENST00000355192 CSPP1Q1MSJ5 1256 aa17.12■□□□□ 0.33
MSRB3-202ENST00000355192 ANO2Q9NQ90 1003 aa17.12■□□□□ 0.33
MSRB3-202ENST00000355192 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.12■□□□□ 0.33
MSRB3-202ENST00000355192 RALGAPBQ86X10 1494 aa17.12■□□□□ 0.33
MSRB3-202ENST00000355192 GRPEL1Q9HAV7 217 aa17.11■□□□□ 0.33
MSRB3-202ENST00000355192 IGHDP01880 384 aa17.11■□□□□ 0.33
MSRB3-202ENST00000355192 CT47B1P0C2W7 299 aaPredicted RBP17.11■□□□□ 0.33
MSRB3-202ENST00000355192 A0A0G2JS52 829 aa17.1■□□□□ 0.33
MSRB3-202ENST00000355192 CAVIN1Q6NZI2 390 aaKnown RBP17.1■□□□□ 0.33
MSRB3-202ENST00000355192 LTV1Q96GA3 475 aaPredicted RBP17.1■□□□□ 0.33
MSRB3-202ENST00000355192 PARD3Q8TEW0 1356 aa17.1■□□□□ 0.33
MSRB3-202ENST00000355192 NGDNQ8NEJ9 315 aaKnown RBP17.1■□□□□ 0.33
MSRB3-202ENST00000355192 TBC1D2Q9BYX2 928 aa17.1■□□□□ 0.33
MSRB3-202ENST00000355192 TCOF1Q13428 1488 aaKnown RBP17.1■□□□□ 0.33
MSRB3-202ENST00000355192 GCC1Q96CN9 775 aa17.09■□□□□ 0.33
MSRB3-202ENST00000355192 GPATCH3Q96I76 525 aa17.09■□□□□ 0.33
MSRB3-202ENST00000355192 DNAJC5BQ9UF47 199 aa17.09■□□□□ 0.33
MSRB3-202ENST00000355192 HTATSF1O43719 755 aaKnown RBP17.08■□□□□ 0.33
MSRB3-202ENST00000355192 GPATCH8Q9UKJ3 1502 aaKnown RBP17.08■□□□□ 0.32
MSRB3-202ENST00000355192 CHMP4AQ9BY43 222 aa17.08■□□□□ 0.32
MSRB3-202ENST00000355192 NSD3Q9BZ95 1437 aa17.08■□□□□ 0.32
MSRB3-202ENST00000355192 CHD1LQ86WJ1 897 aa17.07■□□□□ 0.32
MSRB3-202ENST00000355192 RNF214Q8ND24 703 aa17.07■□□□□ 0.32
MSRB3-202ENST00000355192 ISY1Q9ULR0 285 aaKnown RBP17.07■□□□□ 0.32
MSRB3-202ENST00000355192 ATP6V1DQ9Y5K8 247 aa17.07■□□□□ 0.32
MSRB3-202ENST00000355192 RNF123Q5XPI4 1314 aa17.07■□□□□ 0.32
MSRB3-202ENST00000355192 NECTIN2Q92692 538 aa17.07■□□□□ 0.32
MSRB3-202ENST00000355192 RABEP1Q15276 862 aa17.06■□□□□ 0.32
MSRB3-202ENST00000355192 C8orf34Q49A92 452 aa17.06■□□□□ 0.32
MSRB3-202ENST00000355192 R3HCC1Q9Y3T6 440 aaKnown RBP17.06■□□□□ 0.32
MSRB3-202ENST00000355192 LAMC3Q9Y6N6 1575 aa17.06■□□□□ 0.32
MSRB3-202ENST00000355192 ESPNB1AK53 854 aa17.06■□□□□ 0.32
MSRB3-202ENST00000355192 K7ELQ4 463 aaPredicted RBP17.06■□□□□ 0.32
MSRB3-202ENST00000355192 TMEM57Q8N5G2 664 aa17.06■□□□□ 0.32
MSRB3-202ENST00000355192 TWISTNBQ3B726 338 aaPredicted RBP17.06■□□□□ 0.32
MSRB3-202ENST00000355192 FKBP5Q13451 457 aaPredicted RBP17.05■□□□□ 0.32
MSRB3-202ENST00000355192 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.05■□□□□ 0.32
MSRB3-202ENST00000355192 PRPF40AO75400 957 aaKnown RBP17.04■□□□□ 0.32
MSRB3-202ENST00000355192 CIZ1Q9ULV3 898 aaPredicted RBP17.04■□□□□ 0.32
MSRB3-202ENST00000355192 HDAC5Q9UQL6 1122 aa17.04■□□□□ 0.32
MSRB3-202ENST00000355192 TMPOP42166 694 aaKnown RBP17.04■□□□□ 0.32
MSRB3-202ENST00000355192 SSH1Q8WYL5 1049 aa17.04■□□□□ 0.32
MSRB3-202ENST00000355192 CCDC173Q0VFZ6 552 aa17.03■□□□□ 0.32
MSRB3-202ENST00000355192 HSP90B1P14625 803 aaKnown RBP17.03■□□□□ 0.32
MSRB3-202ENST00000355192 CDK11BP21127 795 aaKnown RBP17.03■□□□□ 0.32
MSRB3-202ENST00000355192 NEK4P51957 841 aa17.03■□□□□ 0.32
MSRB3-202ENST00000355192 AMER1Q5JTC6 1135 aaPredicted RBP17.03■□□□□ 0.32
MSRB3-202ENST00000355192 DIAPH3Q9NSV4 1193 aa17.02■□□□□ 0.32
MSRB3-202ENST00000355192 PER1O15534 1290 aaPredicted RBP17.01■□□□□ 0.31
MSRB3-202ENST00000355192 PRAM1Q96QH2 718 aa17.01■□□□□ 0.31
MSRB3-202ENST00000355192 GRIN2AQ12879 1464 aa17.01■□□□□ 0.31
MSRB3-202ENST00000355192 CTTNBP2Q8WZ74 1663 aa17.01■□□□□ 0.31
MSRB3-202ENST00000355192 TSPYL4Q9UJ04 414 aa17.01■□□□□ 0.31
MSRB3-202ENST00000355192 TBC1D32Q96NH3 1257 aa17.01■□□□□ 0.31
MSRB3-202ENST00000355192 TESK2Q96S53 571 aa17.01■□□□□ 0.31
MSRB3-202ENST00000355192 CHMP3Q9Y3E7 222 aa17■□□□□ 0.31
MSRB3-202ENST00000355192 KIF14Q15058 1648 aa17■□□□□ 0.31
MSRB3-202ENST00000355192 TEX14Q8IWB6 1497 aa17■□□□□ 0.31
MSRB3-202ENST00000355192 PLEKHH1Q9ULM0 1364 aa16.99■□□□□ 0.31
MSRB3-202ENST00000355192 PRAG1Q86YV5 1406 aa16.99■□□□□ 0.31
MSRB3-202ENST00000355192 TPM2P07951 284 aa16.99■□□□□ 0.31
MSRB3-202ENST00000355192 EIF2S2P20042 333 aaKnown RBP16.99■□□□□ 0.31
MSRB3-202ENST00000355192 NUP153P49790 1475 aaKnown RBP16.99■□□□□ 0.31
MSRB3-202ENST00000355192 MBD3O95983 291 aa16.99■□□□□ 0.31
MSRB3-202ENST00000355192 PCDHB15Q9Y5E8 787 aa16.99■□□□□ 0.31
MSRB3-202ENST00000355192 CABP1Q9NZU7 370 aa16.98■□□□□ 0.31
MSRB3-202ENST00000355192 ADGRF5Q8IZF2 1346 aa16.98■□□□□ 0.31
MSRB3-202ENST00000355192 SCAF11Q99590 1463 aaKnown RBP16.98■□□□□ 0.31
MSRB3-202ENST00000355192 GNL2Q13823 731 aaKnown RBP16.98■□□□□ 0.31
MSRB3-202ENST00000355192 SMC3Q9UQE7 1217 aa16.98■□□□□ 0.31
MSRB3-202ENST00000355192 VPS37CA5D8V6 355 aaPredicted RBP16.97■□□□□ 0.31
MSRB3-202ENST00000355192 RUFY2Q8WXA3 655 aa16.97■□□□□ 0.31
MSRB3-202ENST00000355192 TRIM27P14373 513 aa16.97■□□□□ 0.31
MSRB3-202ENST00000355192 CCDC39Q9UFE4 941 aa16.97■□□□□ 0.31
MSRB3-202ENST00000355192 PZPP20742 1482 aa16.97■□□□□ 0.31
MSRB3-202ENST00000355192 ZKSCAN1P17029 563 aaPredicted RBP16.96■□□□□ 0.31
MSRB3-202ENST00000355192 ZNF608Q9ULD9 1512 aaPredicted RBP16.96■□□□□ 0.3
MSRB3-202ENST00000355192 GPRASP1Q5JY77 1395 aa16.96■□□□□ 0.3
MSRB3-202ENST00000355192 THUMPD2Q9BTF0 503 aaKnown RBP16.95■□□□□ 0.3
MSRB3-202ENST00000355192 CWC22Q9HCG8 908 aaKnown RBP16.94■□□□□ 0.3
MSRB3-202ENST00000355192 H3BQV1 296 aa16.94■□□□□ 0.3
MSRB3-202ENST00000355192 IFFO2Q5TF58 517 aa16.94■□□□□ 0.3
MSRB3-202ENST00000355192 ZNF428Q96B54 188 aa16.94■□□□□ 0.3
MSRB3-202ENST00000355192 RBM10P98175 930 aaKnown RBP16.94■□□□□ 0.3
MSRB3-202ENST00000355192 GOLGA6L19H0YKK7 550 aa16.93■□□□□ 0.3
MSRB3-202ENST00000355192 FCHSD2O94868 740 aa16.93■□□□□ 0.3
MSRB3-202ENST00000355192 TEFQ10587 303 aa16.93■□□□□ 0.3
MSRB3-202ENST00000355192 TNPO1Q92973 898 aaKnown RBP16.93■□□□□ 0.3
MSRB3-202ENST00000355192 CDK19Q9BWU1 502 aa16.93■□□□□ 0.3
MSRB3-202ENST00000355192 EID1Q9Y6B2 187 aa16.93■□□□□ 0.3
MSRB3-202ENST00000355192 SPATA31E1Q6ZUB1 1445 aa16.93■□□□□ 0.3
MSRB3-202ENST00000355192 MCM2P49736 904 aa16.93■□□□□ 0.3
MSRB3-202ENST00000355192 C9orf78Q9NZ63 289 aaPredicted RBP16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms