RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 SCAF11Q99590 1463 aaKnown RBP12.07□□□□□ -0.48
SMG6-202ENST00000354901 UGGT1Q9NYU2 1555 aa12.06□□□□□ -0.48
SMG6-202ENST00000354901 RRP9O43818 475 aaKnown RBP12.06□□□□□ -0.48
SMG6-202ENST00000354901 BCAR3O75815 825 aa12.06□□□□□ -0.48
SMG6-202ENST00000354901 PPRC1Q5VV67 1664 aaKnown RBP12.06□□□□□ -0.48
SMG6-202ENST00000354901 RRP7AQ9Y3A4 280 aaKnown RBP12.06□□□□□ -0.48
SMG6-202ENST00000354901 CLTCL1P53675 1640 aa12.05□□□□□ -0.48
SMG6-202ENST00000354901 TMEM132EQ6IEE7 984 aa12.05□□□□□ -0.48
SMG6-202ENST00000354901 SPRYD3Q8NCJ5 442 aa12.05□□□□□ -0.48
SMG6-202ENST00000354901 DMRT2Q9Y5R5 561 aa12.05□□□□□ -0.48
SMG6-202ENST00000354901 AEBP2Q6ZN18 517 aaPredicted RBP12.05□□□□□ -0.48
SMG6-202ENST00000354901 CARD14Q9BXL6 1004 aa12.05□□□□□ -0.48
SMG6-202ENST00000354901 KIAA1210Q9ULL0 1709 aa12.04□□□□□ -0.48
SMG6-202ENST00000354901 EIF3AQ14152 1382 aaKnown RBP12.04□□□□□ -0.48
SMG6-202ENST00000354901 KIF1BO60333 1816 aa12.04□□□□□ -0.48
SMG6-202ENST00000354901 CFAP65Q6ZU64 1925 aaKnown RBP12.04□□□□□ -0.48
SMG6-202ENST00000354901 MADDQ8WXG6 1647 aa12.04□□□□□ -0.48
SMG6-202ENST00000354901 MS4A1P11836 297 aa12.03□□□□□ -0.48
SMG6-202ENST00000354901 SLFN5Q08AF3 891 aa12.03□□□□□ -0.48
SMG6-202ENST00000354901 SAFB2Q14151 953 aaKnown RBP eCLIP12.03□□□□□ -0.48
SMG6-202ENST00000354901 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.03□□□□□ -0.48
SMG6-202ENST00000354901 PANK2Q9BZ23 570 aa12.03□□□□□ -0.48
SMG6-202ENST00000354901 CANXP27824 592 aaKnown RBP12.03□□□□□ -0.48
SMG6-202ENST00000354901 SLC12A5Q9H2X9 1139 aa12.02□□□□□ -0.48
SMG6-202ENST00000354901 ABCC3O15438 1527 aa12.02□□□□□ -0.48
SMG6-202ENST00000354901 ASXL1Q8IXJ9 1541 aa12.02□□□□□ -0.48
SMG6-202ENST00000354901 CAMSAP1Q5T5Y3 1602 aa12.02□□□□□ -0.49
SMG6-202ENST00000354901 ARHGAP31Q2M1Z3 1444 aa12.02□□□□□ -0.49
SMG6-202ENST00000354901 FAM69CQ0P6D2 419 aa12.02□□□□□ -0.49
SMG6-202ENST00000354901 AGLP35573 1532 aa12.01□□□□□ -0.49
SMG6-202ENST00000354901 MYOM2P54296 1465 aa12.01□□□□□ -0.49
SMG6-202ENST00000354901 BCL11BQ9C0K0 894 aaPredicted RBP12.01□□□□□ -0.49
SMG6-202ENST00000354901 KIF13AQ9H1H9 1805 aa12.01□□□□□ -0.49
SMG6-202ENST00000354901 MORC1Q86VD1 984 aa12.01□□□□□ -0.49
SMG6-202ENST00000354901 ZNF521Q96K83 1311 aa12□□□□□ -0.49
SMG6-202ENST00000354901 PPP6R1Q9UPN7 881 aa12□□□□□ -0.49
SMG6-202ENST00000354901 IFT172Q9UG01 1749 aa11.99□□□□□ -0.49
SMG6-202ENST00000354901 CENPQQ7L2Z9 268 aaPredicted RBP11.99□□□□□ -0.49
SMG6-202ENST00000354901 BCL2L13Q9BXK5 485 aa11.99□□□□□ -0.49
SMG6-202ENST00000354901 CENPJQ9HC77 1338 aaPredicted RBP11.99□□□□□ -0.49
SMG6-202ENST00000354901 L1TD1Q5T7N2 865 aaKnown RBP11.99□□□□□ -0.49
SMG6-202ENST00000354901 IQGAP1P46940 1657 aa11.98□□□□□ -0.49
SMG6-202ENST00000354901 PDIA4P13667 645 aaKnown RBP11.98□□□□□ -0.49
SMG6-202ENST00000354901 PANK1Q8TE04 598 aa11.98□□□□□ -0.49
SMG6-202ENST00000354901 COG6Q9Y2V7 657 aa11.98□□□□□ -0.49
SMG6-202ENST00000354901 NOS1P29475 1434 aa11.98□□□□□ -0.49
SMG6-202ENST00000354901 ADGRB3O60242 1522 aa11.98□□□□□ -0.49
SMG6-202ENST00000354901 KDM2BQ8NHM5 1336 aa11.98□□□□□ -0.49
SMG6-202ENST00000354901 AAMPQ13685 434 aa11.97□□□□□ -0.49
SMG6-202ENST00000354901 ERVK-7P63135 1459 aa11.97□□□□□ -0.49
SMG6-202ENST00000354901 PIK3C2GO75747 1445 aa11.97□□□□□ -0.49
SMG6-202ENST00000354901 INSRP06213 1382 aa11.97□□□□□ -0.49
SMG6-202ENST00000354901 E9PSI1 815 aa11.96□□□□□ -0.49
SMG6-202ENST00000354901 RAPGEF3O95398 923 aa11.96□□□□□ -0.49
SMG6-202ENST00000354901 PIK3C2BO00750 1634 aa11.96□□□□□ -0.49
SMG6-202ENST00000354901 GOLGA6L3A6NEY3 463 aa11.96□□□□□ -0.49
SMG6-202ENST00000354901 FGD1P98174 961 aa11.96□□□□□ -0.49
SMG6-202ENST00000354901 SYNMO15061 1565 aa11.96□□□□□ -0.49
SMG6-202ENST00000354901 NPATQ14207 1427 aa11.96□□□□□ -0.49
SMG6-202ENST00000354901 TSPOAP1O95153 1857 aa11.96□□□□□ -0.5
SMG6-202ENST00000354901 STK26Q9P289 416 aa11.96□□□□□ -0.5
SMG6-202ENST00000354901 CLUAP1Q96AJ1 413 aa11.95□□□□□ -0.5
SMG6-202ENST00000354901 NSD3Q9BZ95 1437 aa11.95□□□□□ -0.5
SMG6-202ENST00000354901 RPGRIP1LQ68CZ1 1315 aa11.95□□□□□ -0.5
SMG6-202ENST00000354901 NRXN1Q9ULB1 1477 aa11.95□□□□□ -0.5
SMG6-202ENST00000354901 WWC1Q8IX03 1113 aa11.95□□□□□ -0.5
SMG6-202ENST00000354901 YEATS2Q9ULM3 1422 aa11.94□□□□□ -0.5
SMG6-202ENST00000354901 IGHDP01880 384 aa11.94□□□□□ -0.5
SMG6-202ENST00000354901 MTHFSP49914 203 aa11.94□□□□□ -0.5
SMG6-202ENST00000354901 FAM161AQ3B820 660 aa11.94□□□□□ -0.5
SMG6-202ENST00000354901 ARHGEF40Q8TER5 1519 aa11.94□□□□□ -0.5
SMG6-202ENST00000354901 PRDM10Q9NQV6 1147 aa11.94□□□□□ -0.5
SMG6-202ENST00000354901 ZHX1Q9UKY1 873 aaPredicted RBP11.94□□□□□ -0.5
SMG6-202ENST00000354901 TNNQ9UQP3 1299 aa11.94□□□□□ -0.5
SMG6-202ENST00000354901 TCP11L2Q8N4U5 519 aa11.94□□□□□ -0.5
SMG6-202ENST00000354901 TRIM44Q96DX7 344 aaPredicted RBP11.94□□□□□ -0.5
SMG6-202ENST00000354901 NKTRP30414 1462 aaKnown RBP11.93□□□□□ -0.5
SMG6-202ENST00000354901 XRCC6P12956 609 aaKnown RBP eCLIP11.93□□□□□ -0.5
SMG6-202ENST00000354901 KDM5AP29375 1690 aaKnown RBP11.93□□□□□ -0.5
SMG6-202ENST00000354901 MROH2AA6NES4 1674 aa11.93□□□□□ -0.5
SMG6-202ENST00000354901 C8orf34Q49A92 452 aa11.93□□□□□ -0.5
SMG6-202ENST00000354901 MYOM1P52179 1685 aa11.93□□□□□ -0.5
SMG6-202ENST00000354901 TRMT2AQ8IZ69 625 aaKnown RBP11.92□□□□□ -0.5
SMG6-202ENST00000354901 CABP2Q9NPB3 220 aa11.92□□□□□ -0.5
SMG6-202ENST00000354901 FAM13BQ9NYF5 915 aa11.92□□□□□ -0.5
SMG6-202ENST00000354901 PPLO60437 1756 aa11.92□□□□□ -0.5
SMG6-202ENST00000354901 SETBP1Q9Y6X0 1596 aa11.92□□□□□ -0.5
SMG6-202ENST00000354901 ZBTB7CA1YPR0 619 aa11.92□□□□□ -0.5
SMG6-202ENST00000354901 U2AF1L5P0DN76 240 aaPredicted RBP11.92□□□□□ -0.5
SMG6-202ENST00000354901 U2AF1Q01081 240 aaKnown RBP eCLIP11.92□□□□□ -0.5
SMG6-202ENST00000354901 NPC1L1Q9UHC9 1359 aa11.91□□□□□ -0.5
SMG6-202ENST00000354901 PREX1Q8TCU6 1659 aa11.91□□□□□ -0.5
SMG6-202ENST00000354901 CLCN1P35523 988 aa11.9□□□□□ -0.5
SMG6-202ENST00000354901 SIGLEC1Q9BZZ2 1709 aa11.9□□□□□ -0.5
SMG6-202ENST00000354901 U2SURPO15042 1029 aaKnown RBP11.9□□□□□ -0.5
SMG6-202ENST00000354901 RUNDC1Q96C34 613 aa11.9□□□□□ -0.51
SMG6-202ENST00000354901 C14orf93Q9H972 538 aaKnown RBP11.89□□□□□ -0.51
SMG6-202ENST00000354901 SRPK2P78362 688 aaKnown RBP11.89□□□□□ -0.51
SMG6-202ENST00000354901 SLC52A1Q9NWF4 448 aa11.89□□□□□ -0.51
SMG6-202ENST00000354901 CFAP53Q96M91 514 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 116.4 ms