RNA–Protein interactions for RNA: ENST00000354880.9

CTSA-202, Transcript of cathepsin A, humanhuman

TSL 2 BASIC

Gene CTSA, Length 1,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-202ENST00000354880 NCKAP5LQ9HCH0 1330 aa21.47■■□□□ 1.03
CTSA-202ENST00000354880 ROBO2Q9HCK4 1378 aa21.47■■□□□ 1.03
CTSA-202ENST00000354880 MYOM1P52179 1685 aa21.47■■□□□ 1.03
CTSA-202ENST00000354880 PANK3Q9H999 370 aa21.45■■□□□ 1.02
CTSA-202ENST00000354880 PTCH1Q13635 1447 aa21.44■■□□□ 1.02
CTSA-202ENST00000354880 XRN1Q8IZH2 1706 aaKnown RBP21.43■■□□□ 1.02
CTSA-202ENST00000354880 LMTK3Q96Q04 1460 aa21.43■■□□□ 1.02
CTSA-202ENST00000354880 HSPA2P54652 639 aa21.42■■□□□ 1.02
CTSA-202ENST00000354880 SRPK2P78362 688 aaKnown RBP21.42■■□□□ 1.02
CTSA-202ENST00000354880 CABP2Q9NPB3 220 aa21.42■■□□□ 1.02
CTSA-202ENST00000354880 CHD2O14647 1828 aaKnown RBP21.41■■□□□ 1.02
CTSA-202ENST00000354880 PER1O15534 1290 aaPredicted RBP21.41■■□□□ 1.02
CTSA-202ENST00000354880 CDK19Q9BWU1 502 aa21.4■■□□□ 1.02
CTSA-202ENST00000354880 KCNA6P17658 529 aa21.39■■□□□ 1.02
CTSA-202ENST00000354880 PRKRIP1Q9H875 184 aaPredicted RBP21.39■■□□□ 1.02
CTSA-202ENST00000354880 ATAD2Q6PL18 1390 aa21.38■■□□□ 1.01
CTSA-202ENST00000354880 TMC1Q8TDI8 760 aa21.38■■□□□ 1.01
CTSA-202ENST00000354880 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.37■■□□□ 1.01
CTSA-202ENST00000354880 WASLO00401 505 aaPredicted RBP21.36■■□□□ 1.01
CTSA-202ENST00000354880 SLC12A5Q9H2X9 1139 aa21.36■■□□□ 1.01
CTSA-202ENST00000354880 ADGRB2O60241 1585 aa21.36■■□□□ 1.01
CTSA-202ENST00000354880 NINLQ9Y2I6 1382 aa21.35■■□□□ 1.01
CTSA-202ENST00000354880 CCER2I3L3R5 266 aa21.35■■□□□ 1.01
CTSA-202ENST00000354880 KNSTRNQ9Y448 316 aa21.34■■□□□ 1.01
CTSA-202ENST00000354880 CNGB1Q14028 1251 aaPredicted RBP21.32■■□□□ 1
CTSA-202ENST00000354880 KTN1Q86UP2 1357 aaKnown RBP21.31■■□□□ 1
CTSA-202ENST00000354880 NWD1Q149M9 1564 aa21.3■■□□□ 1
CTSA-202ENST00000354880 ANKRD36BQ8N2N9 1353 aa21.3■■□□□ 1
CTSA-202ENST00000354880 STRCQ7RTU9 1775 aa21.3■■□□□ 1
CTSA-202ENST00000354880 CARD14Q9BXL6 1004 aa21.29■■□□□ 1
CTSA-202ENST00000354880 RALBP1Q15311 655 aa21.28■■□□□ 1
CTSA-202ENST00000354880 AMER1Q5JTC6 1135 aaPredicted RBP21.27■■□□□ 1
CTSA-202ENST00000354880 NUDT16Q96DE0 195 aaKnown RBP21.27■■□□□ 1
CTSA-202ENST00000354880 CC2D1BQ5T0F9 858 aaKnown RBP21.27■□□□□ 0.99
CTSA-202ENST00000354880 CABP1Q9NZU7 370 aa21.27■□□□□ 0.99
CTSA-202ENST00000354880 NPC1L1Q9UHC9 1359 aa21.26■□□□□ 0.99
CTSA-202ENST00000354880 TERF2IPQ9NYB0 399 aa21.26■□□□□ 0.99
CTSA-202ENST00000354880 NSD3Q9BZ95 1437 aa21.26■□□□□ 0.99
CTSA-202ENST00000354880 ATP7BP35670 1465 aa21.26■□□□□ 0.99
CTSA-202ENST00000354880 PARD3Q8TEW0 1356 aa21.26■□□□□ 0.99
CTSA-202ENST00000354880 CCDC61Q9Y6R9 512 aa21.25■□□□□ 0.99
CTSA-202ENST00000354880 A0A1W2PP64 1363 aa21.25■□□□□ 0.99
CTSA-202ENST00000354880 PPIP5K1Q6PFW1 1433 aa21.24■□□□□ 0.99
CTSA-202ENST00000354880 NKTRP30414 1462 aaKnown RBP21.24■□□□□ 0.99
CTSA-202ENST00000354880 CD163L1Q9NR16 1453 aa21.24■□□□□ 0.99
CTSA-202ENST00000354880 PRR36Q9H6K5 1346 aa21.23■□□□□ 0.99
CTSA-202ENST00000354880 HDGFL2Q7Z4V5 671 aaPredicted RBP21.22■□□□□ 0.99
CTSA-202ENST00000354880 NALCNQ8IZF0 1738 aa21.22■□□□□ 0.99
CTSA-202ENST00000354880 MYBBP1AQ9BQG0 1328 aaKnown RBP21.21■□□□□ 0.99
CTSA-202ENST00000354880 ADGRL3Q9HAR2 1447 aa21.21■□□□□ 0.99
CTSA-202ENST00000354880 USP32Q8NFA0 1604 aa21.21■□□□□ 0.99
CTSA-202ENST00000354880 RBM33Q96EV2 1170 aaKnown RBP21.2■□□□□ 0.98
CTSA-202ENST00000354880 CGNL1Q0VF96 1302 aa21.2■□□□□ 0.98
CTSA-202ENST00000354880 PROSER2Q86WR7 435 aaPredicted RBP21.2■□□□□ 0.98
CTSA-202ENST00000354880 CDC42BPGQ6DT37 1551 aa21.19■□□□□ 0.98
CTSA-202ENST00000354880 NUTM2FA1L443 756 aa21.19■□□□□ 0.98
CTSA-202ENST00000354880 TOPAZ1Q8N9V7 1692 aa21.19■□□□□ 0.98
CTSA-202ENST00000354880 STRCP1A6NGW2 1772 aa21.18■□□□□ 0.98
CTSA-202ENST00000354880 FMN2Q9NZ56 1722 aa21.18■□□□□ 0.98
CTSA-202ENST00000354880 CCDC184Q52MB2 194 aa21.18■□□□□ 0.98
CTSA-202ENST00000354880 CPSF1Q10570 1443 aaKnown RBP21.17■□□□□ 0.98
CTSA-202ENST00000354880 C14orf37Q86TY3 774 aa21.17■□□□□ 0.98
CTSA-202ENST00000354880 MRS2Q9HD23 443 aa21.17■□□□□ 0.98
CTSA-202ENST00000354880 ANKARQ7Z5J8 1434 aa21.17■□□□□ 0.98
CTSA-202ENST00000354880 ITSN1Q15811 1721 aa21.16■□□□□ 0.98
CTSA-202ENST00000354880 PLEKHG3A1L390 1219 aa21.15■□□□□ 0.98
CTSA-202ENST00000354880 NLRP13Q86W25 1043 aa21.15■□□□□ 0.98
CTSA-202ENST00000354880 NSD2O96028 1365 aa21.14■□□□□ 0.98
CTSA-202ENST00000354880 YTHDC1Q96MU7 727 aaKnown RBP21.14■□□□□ 0.97
CTSA-202ENST00000354880 DMRT2Q9Y5R5 561 aa21.14■□□□□ 0.97
CTSA-202ENST00000354880 BRD4O60885 1362 aaPredicted RBP21.14■□□□□ 0.97
CTSA-202ENST00000354880 RGPD8O14715 1765 aaPredicted RBP21.14■□□□□ 0.97
CTSA-202ENST00000354880 ZNF692Q9BU19 519 aaPredicted RBP21.13■□□□□ 0.97
CTSA-202ENST00000354880 AKAP12Q02952 1782 aa21.13■□□□□ 0.97
CTSA-202ENST00000354880 NCOA3Q9Y6Q9 1424 aa21.12■□□□□ 0.97
CTSA-202ENST00000354880 TMEM94Q12767 1356 aa21.12■□□□□ 0.97
CTSA-202ENST00000354880 EDC4Q6P2E9 1401 aaKnown RBP21.12■□□□□ 0.97
CTSA-202ENST00000354880 MON2Q7Z3U7 1717 aa21.11■□□□□ 0.97
CTSA-202ENST00000354880 ACEP12821 1306 aa21.11■□□□□ 0.97
CTSA-202ENST00000354880 C19orf44Q9H6X5 657 aa21.1■□□□□ 0.97
CTSA-202ENST00000354880 PPP2R1AP30153 589 aa21.09■□□□□ 0.97
CTSA-202ENST00000354880 MORC1Q86VD1 984 aa21.09■□□□□ 0.97
CTSA-202ENST00000354880 FYB1O15117 783 aa21.08■□□□□ 0.97
CTSA-202ENST00000354880 PMFBP1Q8TBY8 1022 aa21.08■□□□□ 0.97
CTSA-202ENST00000354880 ZNF335Q9H4Z2 1342 aaPredicted RBP21.08■□□□□ 0.97
CTSA-202ENST00000354880 POLR3AO14802 1390 aaPredicted RBP21.07■□□□□ 0.96
CTSA-202ENST00000354880 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.07■□□□□ 0.96
CTSA-202ENST00000354880 KIF20BQ96Q89 1820 aa21.07■□□□□ 0.96
CTSA-202ENST00000354880 GGNBP2Q9H3C7 697 aa21.06■□□□□ 0.96
CTSA-202ENST00000354880 ANKRD26Q9UPS8 1709 aa21.06■□□□□ 0.96
CTSA-202ENST00000354880 NGDNQ8NEJ9 315 aaKnown RBP21.06■□□□□ 0.96
CTSA-202ENST00000354880 USP6P35125 1406 aa21.05■□□□□ 0.96
CTSA-202ENST00000354880 DCCP43146 1447 aa21.05■□□□□ 0.96
CTSA-202ENST00000354880 FAM9BQ8IZU0 186 aa21.04■□□□□ 0.96
CTSA-202ENST00000354880 NRKQ7Z2Y5 1582 aa21.03■□□□□ 0.96
CTSA-202ENST00000354880 ATF3P18847 181 aa21.03■□□□□ 0.96
CTSA-202ENST00000354880 PHF8Q9UPP1 1060 aa21.03■□□□□ 0.96
CTSA-202ENST00000354880 LRRC7Q96NW7 1537 aa21.03■□□□□ 0.96
CTSA-202ENST00000354880 TNNT2P45379 298 aaPredicted RBP21.02■□□□□ 0.96
CTSA-202ENST00000354880 XIRP1Q702N8 1843 aaKnown RBP21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms