RNA–Protein interactions for RNA: ENST00000354537.1

CAPN9-202, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-202ENST00000354537 ANTXR1Q9H6X2 564 aa14.6□□□□□ -0.07
CAPN9-202ENST00000354537 COG6Q9Y2V7 657 aa14.6□□□□□ -0.07
CAPN9-202ENST00000354537 PUS7Q96PZ0 661 aaKnown RBP14.59□□□□□ -0.07
CAPN9-202ENST00000354537 RWDD1Q9H446 243 aaPredicted RBP14.59□□□□□ -0.07
CAPN9-202ENST00000354537 CT47B1P0C2W7 299 aaPredicted RBP14.59□□□□□ -0.07
CAPN9-202ENST00000354537 PANK1Q8TE04 598 aa14.59□□□□□ -0.07
CAPN9-202ENST00000354537 RSPH6AQ9H0K4 717 aa14.59□□□□□ -0.07
CAPN9-202ENST00000354537 ATP7AQ04656 1500 aa14.59□□□□□ -0.07
CAPN9-202ENST00000354537 KIF1BO60333 1816 aa14.59□□□□□ -0.07
CAPN9-202ENST00000354537 CFAP70Q5T0N1 1121 aa14.58□□□□□ -0.07
CAPN9-202ENST00000354537 SEC24BO95487 1268 aa14.58□□□□□ -0.08
CAPN9-202ENST00000354537 LMTK2Q8IWU2 1503 aa14.57□□□□□ -0.08
CAPN9-202ENST00000354537 FANCAO15360 1455 aa14.57□□□□□ -0.08
CAPN9-202ENST00000354537 ADGRL1O94910 1474 aa14.57□□□□□ -0.08
CAPN9-202ENST00000354537 MORC1Q86VD1 984 aa14.56□□□□□ -0.08
CAPN9-202ENST00000354537 MROH1Q8NDA8 1641 aa14.56□□□□□ -0.08
CAPN9-202ENST00000354537 EFCAB6Q5THR3 1501 aa14.56□□□□□ -0.08
CAPN9-202ENST00000354537 ERCC6L2Q5T890 1561 aa14.55□□□□□ -0.08
CAPN9-202ENST00000354537 ADGRF5Q8IZF2 1346 aa14.55□□□□□ -0.08
CAPN9-202ENST00000354537 MYH16Q9H6N6 1097 aa14.55□□□□□ -0.08
CAPN9-202ENST00000354537 ZNF518AQ6AHZ1 1483 aa14.55□□□□□ -0.08
CAPN9-202ENST00000354537 TCP11L2Q8N4U5 519 aa14.55□□□□□ -0.08
CAPN9-202ENST00000354537 AFAP1Q8N556 730 aa14.55□□□□□ -0.08
CAPN9-202ENST00000354537 PDZRN3Q9UPQ7 1066 aa14.55□□□□□ -0.08
CAPN9-202ENST00000354537 PCDHB15Q9Y5E8 787 aa14.55□□□□□ -0.08
CAPN9-202ENST00000354537 NSD3Q9BZ95 1437 aa14.55□□□□□ -0.08
CAPN9-202ENST00000354537 NSD2O96028 1365 aa14.55□□□□□ -0.08
CAPN9-202ENST00000354537 ABCA9Q8IUA7 1624 aa14.54□□□□□ -0.08
CAPN9-202ENST00000354537 CFAP53Q96M91 514 aa14.54□□□□□ -0.08
CAPN9-202ENST00000354537 ZC3H13Q5T200 1668 aaKnown RBP14.54□□□□□ -0.08
CAPN9-202ENST00000354537 ADGRB3O60242 1522 aa14.53□□□□□ -0.08
CAPN9-202ENST00000354537 TBC1D2Q9BYX2 928 aa14.52□□□□□ -0.08
CAPN9-202ENST00000354537 POGKQ9P215 609 aa14.52□□□□□ -0.08
CAPN9-202ENST00000354537 MVPQ14764 893 aaKnown RBP14.52□□□□□ -0.09
CAPN9-202ENST00000354537 ADGRB2O60241 1585 aa14.51□□□□□ -0.09
CAPN9-202ENST00000354537 RPGRIP1LQ68CZ1 1315 aa14.5□□□□□ -0.09
CAPN9-202ENST00000354537 KIF3BO15066 747 aa14.5□□□□□ -0.09
CAPN9-202ENST00000354537 RLBP1P12271 317 aa14.5□□□□□ -0.09
CAPN9-202ENST00000354537 ZKSCAN2Q63HK3 967 aa14.5□□□□□ -0.09
CAPN9-202ENST00000354537 C14orf93Q9H972 538 aaKnown RBP14.5□□□□□ -0.09
CAPN9-202ENST00000354537 HDAC1Q13547 482 aaPredicted RBP14.5□□□□□ -0.09
CAPN9-202ENST00000354537 MROH2AA6NES4 1674 aa14.49□□□□□ -0.09
CAPN9-202ENST00000354537 ADGRB1O14514 1584 aa14.49□□□□□ -0.09
CAPN9-202ENST00000354537 FSD2A1L4K1 749 aa14.49□□□□□ -0.09
CAPN9-202ENST00000354537 SLKQ9H2G2 1235 aaPredicted RBP14.49□□□□□ -0.09
CAPN9-202ENST00000354537 CHMP5Q9NZZ3 219 aa14.49□□□□□ -0.09
CAPN9-202ENST00000354537 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.49□□□□□ -0.09
CAPN9-202ENST00000354537 QRICH2Q9H0J4 1663 aa14.49□□□□□ -0.09
CAPN9-202ENST00000354537 UGGT1Q9NYU2 1555 aa14.48□□□□□ -0.09
CAPN9-202ENST00000354537 MCM4P33991 863 aa14.48□□□□□ -0.09
CAPN9-202ENST00000354537 PPRC1Q5VV67 1664 aaKnown RBP14.47□□□□□ -0.09
CAPN9-202ENST00000354537 NOS1P29475 1434 aa14.47□□□□□ -0.09
CAPN9-202ENST00000354537 DZIP1LQ8IYY4 767 aaKnown RBP14.47□□□□□ -0.09
CAPN9-202ENST00000354537 ISY1Q9ULR0 285 aaKnown RBP14.47□□□□□ -0.09
CAPN9-202ENST00000354537 MTHFSP49914 203 aa14.47□□□□□ -0.09
CAPN9-202ENST00000354537 IL16Q14005 1332 aa14.46□□□□□ -0.09
CAPN9-202ENST00000354537 PPLO60437 1756 aa14.46□□□□□ -0.09
CAPN9-202ENST00000354537 GOLGA6L3A6NEY3 463 aa14.46□□□□□ -0.1
CAPN9-202ENST00000354537 C22orf23Q9BZE7 217 aa14.46□□□□□ -0.1
CAPN9-202ENST00000354537 ANKRD36BQ8N2N9 1353 aa14.45□□□□□ -0.1
CAPN9-202ENST00000354537 ABCC11Q96J66 1382 aa14.45□□□□□ -0.1
CAPN9-202ENST00000354537 SLC12A5Q9H2X9 1139 aa14.45□□□□□ -0.1
CAPN9-202ENST00000354537 DDX19BQ9UMR2 479 aa14.45□□□□□ -0.1
CAPN9-202ENST00000354537 RRP7AQ9Y3A4 280 aaKnown RBP14.45□□□□□ -0.1
CAPN9-202ENST00000354537 NEUROD2Q15784 382 aa14.44□□□□□ -0.1
CAPN9-202ENST00000354537 UBE2Q2Q8WVN8 375 aa14.44□□□□□ -0.1
CAPN9-202ENST00000354537 SMC5Q8IY18 1101 aa14.43□□□□□ -0.1
CAPN9-202ENST00000354537 FTSJ3Q8IY81 847 aaKnown RBP14.43□□□□□ -0.1
CAPN9-202ENST00000354537 TNNQ9UQP3 1299 aa14.43□□□□□ -0.1
CAPN9-202ENST00000354537 NCOA3Q9Y6Q9 1424 aa14.42□□□□□ -0.1
CAPN9-202ENST00000354537 EVC2Q86UK5 1308 aa14.42□□□□□ -0.1
CAPN9-202ENST00000354537 DDX11L8A8MPP1 907 aa14.42□□□□□ -0.1
CAPN9-202ENST00000354537 SNX21Q969T3 373 aa14.42□□□□□ -0.1
CAPN9-202ENST00000354537 XRCC6P12956 609 aaKnown RBP eCLIP14.41□□□□□ -0.1
CAPN9-202ENST00000354537 MRE11P49959 708 aa14.41□□□□□ -0.1
CAPN9-202ENST00000354537 TRAK1Q9UPV9 953 aa14.41□□□□□ -0.1
CAPN9-202ENST00000354537 KIDINS220Q9ULH0 1771 aa14.41□□□□□ -0.1
CAPN9-202ENST00000354537 PTMSP20962 102 aa14.4□□□□□ -0.1
CAPN9-202ENST00000354537 RBM25P49756 843 aaKnown RBP14.4□□□□□ -0.1
CAPN9-202ENST00000354537 CIZ1Q9ULV3 898 aaPredicted RBP14.4□□□□□ -0.1
CAPN9-202ENST00000354537 U2AF1L5P0DN76 240 aaPredicted RBP14.4□□□□□ -0.1
CAPN9-202ENST00000354537 U2AF1Q01081 240 aaKnown RBP eCLIP14.4□□□□□ -0.1
CAPN9-202ENST00000354537 ATF7IPQ6VMQ6 1270 aa14.4□□□□□ -0.1
CAPN9-202ENST00000354537 RRAGDQ9NQL2 400 aaPredicted RBP14.4□□□□□ -0.1
CAPN9-202ENST00000354537 MED14O60244 1454 aa14.4□□□□□ -0.1
CAPN9-202ENST00000354537 TRAK2O60296 914 aa14.39□□□□□ -0.11
CAPN9-202ENST00000354537 HSCBQ8IWL3 235 aa14.39□□□□□ -0.11
CAPN9-202ENST00000354537 PLEKHF1Q96S99 279 aa14.39□□□□□ -0.11
CAPN9-202ENST00000354537 BCL2L13Q9BXK5 485 aa14.39□□□□□ -0.11
CAPN9-202ENST00000354537 IPO8O15397 1037 aaKnown RBP14.39□□□□□ -0.11
CAPN9-202ENST00000354537 DDIT3P35638 169 aa14.39□□□□□ -0.11
CAPN9-202ENST00000354537 PNNQ9H307 717 aaKnown RBP14.39□□□□□ -0.11
CAPN9-202ENST00000354537 TRIM27P14373 513 aa14.38□□□□□ -0.11
CAPN9-202ENST00000354537 CLCN1P35523 988 aa14.38□□□□□ -0.11
CAPN9-202ENST00000354537 TNNT2P45379 298 aaPredicted RBP14.38□□□□□ -0.11
CAPN9-202ENST00000354537 SMC4Q9NTJ3 1288 aa14.38□□□□□ -0.11
CAPN9-202ENST00000354537 TULP4Q9NRJ4 1543 aa14.38□□□□□ -0.11
CAPN9-202ENST00000354537 ZNF428Q96B54 188 aa14.38□□□□□ -0.11
CAPN9-202ENST00000354537 ZNF692Q9BU19 519 aaPredicted RBP14.38□□□□□ -0.11
CAPN9-202ENST00000354537 KIF16BQ96L93 1317 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 404.6 ms