RNA–Protein interactions for RNA: ENST00000354532.7

ARHGEF1-203, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ARHGEF1, Length 3,243 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-203ENST00000354532 MAP3K4Q9Y6R4 1608 aa16.78■□□□□ 0.28
ARHGEF1-203ENST00000354532 PLPPR3Q6T4P5 718 aa16.77■□□□□ 0.28
ARHGEF1-203ENST00000354532 CEP152O94986 1710 aa16.77■□□□□ 0.28
ARHGEF1-203ENST00000354532 MAPK8IP3Q9UPT6 1336 aa16.77■□□□□ 0.28
ARHGEF1-203ENST00000354532 ABCA6Q8N139 1617 aa16.77■□□□□ 0.27
ARHGEF1-203ENST00000354532 FRMPD1Q5SYB0 1578 aa16.75■□□□□ 0.27
ARHGEF1-203ENST00000354532 KDM5AP29375 1690 aaKnown RBP16.75■□□□□ 0.27
ARHGEF1-203ENST00000354532 FBXO31Q5XUX0 539 aaPredicted RBP16.75■□□□□ 0.27
ARHGEF1-203ENST00000354532 CFAP70Q5T0N1 1121 aa16.74■□□□□ 0.27
ARHGEF1-203ENST00000354532 WWC1Q8IX03 1113 aa16.74■□□□□ 0.27
ARHGEF1-203ENST00000354532 CARD14Q9BXL6 1004 aa16.74■□□□□ 0.27
ARHGEF1-203ENST00000354532 NPATQ14207 1427 aa16.74■□□□□ 0.27
ARHGEF1-203ENST00000354532 BECN1Q14457 450 aa16.74■□□□□ 0.27
ARHGEF1-203ENST00000354532 MROH1Q8NDA8 1641 aa16.74■□□□□ 0.27
ARHGEF1-203ENST00000354532 CENPJQ9HC77 1338 aaPredicted RBP16.74■□□□□ 0.27
ARHGEF1-203ENST00000354532 TNNQ9UQP3 1299 aa16.74■□□□□ 0.27
ARHGEF1-203ENST00000354532 PCDHB15Q9Y5E8 787 aa16.74■□□□□ 0.27
ARHGEF1-203ENST00000354532 ADGRF5Q8IZF2 1346 aa16.73■□□□□ 0.27
ARHGEF1-203ENST00000354532 CDCA8Q53HL2 280 aa16.73■□□□□ 0.27
ARHGEF1-203ENST00000354532 TBC1D32Q96NH3 1257 aa16.73■□□□□ 0.27
ARHGEF1-203ENST00000354532 TBC1D2Q9BYX2 928 aa16.73■□□□□ 0.27
ARHGEF1-203ENST00000354532 DEPDC5O75140 1603 aa16.72■□□□□ 0.27
ARHGEF1-203ENST00000354532 NINLQ9Y2I6 1382 aa16.72■□□□□ 0.27
ARHGEF1-203ENST00000354532 SHPRHQ149N8 1683 aa16.72■□□□□ 0.27
ARHGEF1-203ENST00000354532 CLTCL1P53675 1640 aa16.72■□□□□ 0.27
ARHGEF1-203ENST00000354532 RLBP1P12271 317 aa16.72■□□□□ 0.27
ARHGEF1-203ENST00000354532 PTPRTO14522 1441 aa16.71■□□□□ 0.27
ARHGEF1-203ENST00000354532 TET3O43151 1660 aa16.71■□□□□ 0.27
ARHGEF1-203ENST00000354532 GLI2P10070 1586 aa16.71■□□□□ 0.27
ARHGEF1-203ENST00000354532 TRPM2O94759 1503 aa16.71■□□□□ 0.27
ARHGEF1-203ENST00000354532 ERVK-7P63135 1459 aa16.7■□□□□ 0.26
ARHGEF1-203ENST00000354532 DIP2CQ9Y2E4 1556 aa16.7■□□□□ 0.26
ARHGEF1-203ENST00000354532 RICTORQ6R327 1708 aa16.69■□□□□ 0.26
ARHGEF1-203ENST00000354532 XRCC6P12956 609 aaKnown RBP eCLIP16.69■□□□□ 0.26
ARHGEF1-203ENST00000354532 RARSP54136 660 aaKnown RBP16.69■□□□□ 0.26
ARHGEF1-203ENST00000354532 IDI1Q13907 227 aa16.69■□□□□ 0.26
ARHGEF1-203ENST00000354532 STAG3Q9UJ98 1225 aa16.69■□□□□ 0.26
ARHGEF1-203ENST00000354532 PPRC1Q5VV67 1664 aaKnown RBP16.69■□□□□ 0.26
ARHGEF1-203ENST00000354532 ESF1Q9H501 851 aaKnown RBP16.68■□□□□ 0.26
ARHGEF1-203ENST00000354532 VWDEQ8N2E2 1590 aa16.68■□□□□ 0.26
ARHGEF1-203ENST00000354532 FSD2A1L4K1 749 aa16.68■□□□□ 0.26
ARHGEF1-203ENST00000354532 PDZRN3Q9UPQ7 1066 aa16.68■□□□□ 0.26
ARHGEF1-203ENST00000354532 CANXP27824 592 aaKnown RBP16.68■□□□□ 0.26
ARHGEF1-203ENST00000354532 L1TD1Q5T7N2 865 aaKnown RBP16.68■□□□□ 0.26
ARHGEF1-203ENST00000354532 TMEM132EQ6IEE7 984 aa16.68■□□□□ 0.26
ARHGEF1-203ENST00000354532 EFCAB6Q5THR3 1501 aa16.68■□□□□ 0.26
ARHGEF1-203ENST00000354532 NGEFQ8N5V2 710 aa16.67■□□□□ 0.26
ARHGEF1-203ENST00000354532 ZMYM3Q14202 1370 aa16.67■□□□□ 0.26
ARHGEF1-203ENST00000354532 KIAA1210Q9ULL0 1709 aa16.67■□□□□ 0.26
ARHGEF1-203ENST00000354532 POLR3AO14802 1390 aaPredicted RBP16.66■□□□□ 0.26
ARHGEF1-203ENST00000354532 IQSEC2Q5JU85 1478 aa16.66■□□□□ 0.26
ARHGEF1-203ENST00000354532 PANK2Q9BZ23 570 aa16.66■□□□□ 0.26
ARHGEF1-203ENST00000354532 PMFBP1Q8TBY8 1022 aa16.65■□□□□ 0.26
ARHGEF1-203ENST00000354532 SPRYD3Q8NCJ5 442 aa16.65■□□□□ 0.26
ARHGEF1-203ENST00000354532 RRP7AQ9Y3A4 280 aaKnown RBP16.65■□□□□ 0.26
ARHGEF1-203ENST00000354532 PHF23Q9BUL5 403 aaPredicted RBP16.64■□□□□ 0.26
ARHGEF1-203ENST00000354532 ABCC3O15438 1527 aa16.64■□□□□ 0.25
ARHGEF1-203ENST00000354532 ARXQ96QS3 562 aa16.64■□□□□ 0.25
ARHGEF1-203ENST00000354532 TRAK1Q9UPV9 953 aa16.64■□□□□ 0.25
ARHGEF1-203ENST00000354532 BCL2L13Q9BXK5 485 aa16.64■□□□□ 0.25
ARHGEF1-203ENST00000354532 NOS1P29475 1434 aa16.63■□□□□ 0.25
ARHGEF1-203ENST00000354532 MCM4P33991 863 aa16.63■□□□□ 0.25
ARHGEF1-203ENST00000354532 NEUROD2Q15784 382 aa16.63■□□□□ 0.25
ARHGEF1-203ENST00000354532 SAFB2Q14151 953 aaKnown RBP eCLIP16.61■□□□□ 0.25
ARHGEF1-203ENST00000354532 GZF1Q9H116 711 aaPredicted RBP16.61■□□□□ 0.25
ARHGEF1-203ENST00000354532 UPF2Q9HAU5 1272 aaKnown RBP16.61■□□□□ 0.25
ARHGEF1-203ENST00000354532 GOLGA6L3A6NEY3 463 aa16.6■□□□□ 0.25
ARHGEF1-203ENST00000354532 KIF13AQ9H1H9 1805 aa16.6■□□□□ 0.25
ARHGEF1-203ENST00000354532 TCP11L2Q8N4U5 519 aa16.6■□□□□ 0.25
ARHGEF1-203ENST00000354532 STAC3Q96MF2 364 aa16.6■□□□□ 0.25
ARHGEF1-203ENST00000354532 AAMPQ13685 434 aa16.6■□□□□ 0.25
ARHGEF1-203ENST00000354532 STK26Q9P289 416 aa16.59■□□□□ 0.25
ARHGEF1-203ENST00000354532 RUNDC1Q96C34 613 aa16.58■□□□□ 0.24
ARHGEF1-203ENST00000354532 LMTK2Q8IWU2 1503 aa16.58■□□□□ 0.24
ARHGEF1-203ENST00000354532 MYO3AQ8NEV4 1616 aa16.57■□□□□ 0.24
ARHGEF1-203ENST00000354532 ZNF692Q9BU19 519 aaPredicted RBP16.57■□□□□ 0.24
ARHGEF1-203ENST00000354532 CLCN1P35523 988 aa16.57■□□□□ 0.24
ARHGEF1-203ENST00000354532 RWDD1Q9H446 243 aaPredicted RBP16.57■□□□□ 0.24
ARHGEF1-203ENST00000354532 TRAK2O60296 914 aa16.56■□□□□ 0.24
ARHGEF1-203ENST00000354532 WDR63Q8IWG1 891 aa16.56■□□□□ 0.24
ARHGEF1-203ENST00000354532 C22orf23Q9BZE7 217 aa16.56■□□□□ 0.24
ARHGEF1-203ENST00000354532 TNNT2P45379 298 aaPredicted RBP16.56■□□□□ 0.24
ARHGEF1-203ENST00000354532 CEBPAP49715 358 aaPredicted RBP16.55■□□□□ 0.24
ARHGEF1-203ENST00000354532 SLC52A1Q9NWF4 448 aa16.55■□□□□ 0.24
ARHGEF1-203ENST00000354532 IFT172Q9UG01 1749 aa16.55■□□□□ 0.24
ARHGEF1-203ENST00000354532 KIF1BO60333 1816 aa16.55■□□□□ 0.24
ARHGEF1-203ENST00000354532 MVPQ14764 893 aaKnown RBP16.55■□□□□ 0.24
ARHGEF1-203ENST00000354532 NSD3Q9BZ95 1437 aa16.55■□□□□ 0.24
ARHGEF1-203ENST00000354532 NEURL4Q96JN8 1562 aa16.55■□□□□ 0.24
ARHGEF1-203ENST00000354532 CAMSAP1Q5T5Y3 1602 aa16.55■□□□□ 0.24
ARHGEF1-203ENST00000354532 VGFO15240 615 aaPredicted RBP16.55■□□□□ 0.24
ARHGEF1-203ENST00000354532 CHMP5Q9NZZ3 219 aa16.54■□□□□ 0.24
ARHGEF1-203ENST00000354532 MYOM2P54296 1465 aa16.54■□□□□ 0.24
ARHGEF1-203ENST00000354532 MROH2AA6NES4 1674 aa16.53■□□□□ 0.24
ARHGEF1-203ENST00000354532 DDIT3P35638 169 aa16.53■□□□□ 0.24
ARHGEF1-203ENST00000354532 MFAP1P55081 439 aaKnown RBP16.53■□□□□ 0.24
ARHGEF1-203ENST00000354532 SIGLEC1Q9BZZ2 1709 aa16.53■□□□□ 0.24
ARHGEF1-203ENST00000354532 CCDC27Q2M243 656 aa16.53■□□□□ 0.24
ARHGEF1-203ENST00000354532 NCOA3Q9Y6Q9 1424 aa16.52■□□□□ 0.24
ARHGEF1-203ENST00000354532 MORC1Q86VD1 984 aa16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms