RNA–Protein interactions for RNA: ENST00000354376.3

C9orf163-201, Transcript of chromosome 9 open reading frame 163, humanhuman

Gene C9orf163, Length 2,572 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf163-201ENST00000354376 SPINK5Q9NQ38 1064 aaPredicted RBP29.83■■■□□ 2.37
C9orf163-201ENST00000354376 STAG3Q9UJ98 1225 aa29.83■■■□□ 2.37
C9orf163-201ENST00000354376 DUSP27Q5VZP5 1158 aa29.82■■■□□ 2.36
C9orf163-201ENST00000354376 MINK1Q8N4C8 1332 aaPredicted RBP29.8■■■□□ 2.36
C9orf163-201ENST00000354376 ZFYVE9O95405 1425 aa29.79■■■□□ 2.36
C9orf163-201ENST00000354376 C20orf194Q5TEA3 1177 aa29.79■■■□□ 2.36
C9orf163-201ENST00000354376 PRAM1Q96QH2 718 aa29.79■■■□□ 2.36
C9orf163-201ENST00000354376 DMRT2Q9Y5R5 561 aa29.79■■■□□ 2.36
C9orf163-201ENST00000354376 GOLGA2Q08379 1002 aa29.78■■■□□ 2.36
C9orf163-201ENST00000354376 CLTCQ00610 1675 aaKnown RBP29.78■■■□□ 2.36
C9orf163-201ENST00000354376 SRPK2P78362 688 aaKnown RBP29.77■■■□□ 2.36
C9orf163-201ENST00000354376 CRBNQ96SW2 442 aa29.74■■■□□ 2.35
C9orf163-201ENST00000354376 MSH5O43196 834 aa29.73■■■□□ 2.35
C9orf163-201ENST00000354376 PTPRMP28827 1452 aa29.73■■■□□ 2.35
C9orf163-201ENST00000354376 MTHFSP49914 203 aa29.72■■■□□ 2.35
C9orf163-201ENST00000354376 SLFN5Q08AF3 891 aa29.72■■■□□ 2.35
C9orf163-201ENST00000354376 CGNL1Q0VF96 1302 aa29.72■■■□□ 2.35
C9orf163-201ENST00000354376 POGKQ9P215 609 aa29.72■■■□□ 2.35
C9orf163-201ENST00000354376 YTHDC2Q9H6S0 1430 aaKnown RBP29.72■■■□□ 2.35
C9orf163-201ENST00000354376 POLR3AO14802 1390 aaPredicted RBP29.72■■■□□ 2.35
C9orf163-201ENST00000354376 ANKRD36BQ8N2N9 1353 aa29.7■■■□□ 2.35
C9orf163-201ENST00000354376 NEUROD2Q15784 382 aa29.69■■■□□ 2.34
C9orf163-201ENST00000354376 RRP7AQ9Y3A4 280 aaKnown RBP29.69■■■□□ 2.34
C9orf163-201ENST00000354376 A0A1W2PP64 1363 aa29.68■■■□□ 2.34
C9orf163-201ENST00000354376 AGLP35573 1532 aa29.68■■■□□ 2.34
C9orf163-201ENST00000354376 ALKQ9UM73 1620 aa29.68■■■□□ 2.34
C9orf163-201ENST00000354376 KIF13AQ9H1H9 1805 aa29.66■■■□□ 2.34
C9orf163-201ENST00000354376 WAPLQ7Z5K2 1190 aa29.66■■■□□ 2.34
C9orf163-201ENST00000354376 SHPRHQ149N8 1683 aa29.66■■■□□ 2.34
C9orf163-201ENST00000354376 GGNBP2Q9H3C7 697 aa29.65■■■□□ 2.34
C9orf163-201ENST00000354376 REREQ9P2R6 1566 aa29.65■■■□□ 2.34
C9orf163-201ENST00000354376 A2ML1A8K2U0 1454 aa29.65■■■□□ 2.34
C9orf163-201ENST00000354376 TRMT2AQ8IZ69 625 aaKnown RBP29.64■■■□□ 2.34
C9orf163-201ENST00000354376 PUS7Q96PZ0 661 aaKnown RBP29.64■■■□□ 2.34
C9orf163-201ENST00000354376 SKAP1Q86WV1 359 aa29.63■■■□□ 2.33
C9orf163-201ENST00000354376 CDK19Q9BWU1 502 aa29.61■■■□□ 2.33
C9orf163-201ENST00000354376 USP32Q8NFA0 1604 aa29.6■■■□□ 2.33
C9orf163-201ENST00000354376 PPP6R1Q9UPN7 881 aa29.6■■■□□ 2.33
C9orf163-201ENST00000354376 RIMS2Q9UQ26 1411 aa29.6■■■□□ 2.33
C9orf163-201ENST00000354376 SPATA31D1Q6ZQQ2 1576 aa29.59■■■□□ 2.33
C9orf163-201ENST00000354376 FANCIQ9NVI1 1328 aa29.59■■■□□ 2.33
C9orf163-201ENST00000354376 WWC1Q8IX03 1113 aa29.59■■■□□ 2.33
C9orf163-201ENST00000354376 BCAR3O75815 825 aa29.58■■■□□ 2.33
C9orf163-201ENST00000354376 CABP1Q9NZU7 370 aa29.57■■■□□ 2.32
C9orf163-201ENST00000354376 CD163L1Q9NR16 1453 aa29.56■■■□□ 2.32
C9orf163-201ENST00000354376 ARHGEF40Q8TER5 1519 aa29.56■■■□□ 2.32
C9orf163-201ENST00000354376 TCP11L2Q8N4U5 519 aa29.56■■■□□ 2.32
C9orf163-201ENST00000354376 ZMYM3Q14202 1370 aa29.56■■■□□ 2.32
C9orf163-201ENST00000354376 ABCC11Q96J66 1382 aa29.55■■■□□ 2.32
C9orf163-201ENST00000354376 FYB1O15117 783 aa29.54■■■□□ 2.32
C9orf163-201ENST00000354376 E9PSI1 815 aa29.54■■■□□ 2.32
C9orf163-201ENST00000354376 RUNDC1Q96C34 613 aa29.54■■■□□ 2.32
C9orf163-201ENST00000354376 ESF1Q9H501 851 aaKnown RBP29.54■■■□□ 2.32
C9orf163-201ENST00000354376 NKTRP30414 1462 aaKnown RBP29.52■■■□□ 2.32
C9orf163-201ENST00000354376 CFAP53Q96M91 514 aa29.52■■■□□ 2.32
C9orf163-201ENST00000354376 U2AF1L5P0DN76 240 aaPredicted RBP29.51■■■□□ 2.31
C9orf163-201ENST00000354376 FBLN1P23142 703 aa29.51■■■□□ 2.31
C9orf163-201ENST00000354376 U2AF1Q01081 240 aaKnown RBP eCLIP29.51■■■□□ 2.31
C9orf163-201ENST00000354376 ATAD2Q6PL18 1390 aa29.51■■■□□ 2.31
C9orf163-201ENST00000354376 TERF2IPQ9NYB0 399 aa29.49■■■□□ 2.31
C9orf163-201ENST00000354376 NSD2O96028 1365 aa29.49■■■□□ 2.31
C9orf163-201ENST00000354376 METP08581 1390 aa29.49■■■□□ 2.31
C9orf163-201ENST00000354376 TXNDC2Q86VQ3 553 aa29.47■■■□□ 2.31
C9orf163-201ENST00000354376 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.47■■■□□ 2.31
C9orf163-201ENST00000354376 IQSEC2Q5JU85 1478 aa29.46■■■□□ 2.31
C9orf163-201ENST00000354376 SETD1AO15047 1707 aaKnown RBP29.45■■■□□ 2.31
C9orf163-201ENST00000354376 NINLQ9Y2I6 1382 aa29.45■■■□□ 2.31
C9orf163-201ENST00000354376 U2SURPO15042 1029 aaKnown RBP29.45■■■□□ 2.3
C9orf163-201ENST00000354376 NLRP1Q9C000 1473 aa29.44■■■□□ 2.3
C9orf163-201ENST00000354376 NCKAP5LQ9HCH0 1330 aa29.44■■■□□ 2.3
C9orf163-201ENST00000354376 NRXN3Q9Y4C0 1643 aa29.43■■■□□ 2.3
C9orf163-201ENST00000354376 HDGFL2Q7Z4V5 671 aaPredicted RBP29.43■■■□□ 2.3
C9orf163-201ENST00000354376 PLPPR3Q6T4P5 718 aa29.42■■■□□ 2.3
C9orf163-201ENST00000354376 CEBPAP49715 358 aaPredicted RBP29.4■■■□□ 2.3
C9orf163-201ENST00000354376 PHF23Q9BUL5 403 aaPredicted RBP29.4■■■□□ 2.3
C9orf163-201ENST00000354376 GOLGA6L2Q8N9W4 650 aaPredicted RBP29.39■■■□□ 2.3
C9orf163-201ENST00000354376 NGEFQ8N5V2 710 aa29.39■■■□□ 2.29
C9orf163-201ENST00000354376 TNRQ92752 1358 aa29.37■■■□□ 2.29
C9orf163-201ENST00000354376 KDM2BQ8NHM5 1336 aa29.35■■■□□ 2.29
C9orf163-201ENST00000354376 COL3A1P02461 1466 aaPredicted RBP29.35■■■□□ 2.29
C9orf163-201ENST00000354376 PPM1GO15355 546 aaPredicted RBP29.35■■■□□ 2.29
C9orf163-201ENST00000354376 BCL2L13Q9BXK5 485 aa29.35■■■□□ 2.29
C9orf163-201ENST00000354376 DLC1Q96QB1 1528 aa29.35■■■□□ 2.29
C9orf163-201ENST00000354376 ZRANB1Q9UGI0 708 aa29.34■■■□□ 2.29
C9orf163-201ENST00000354376 TCERG1O14776 1098 aaKnown RBP29.34■■■□□ 2.29
C9orf163-201ENST00000354376 WASLO00401 505 aaPredicted RBP29.33■■■□□ 2.29
C9orf163-201ENST00000354376 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.33■■■□□ 2.29
C9orf163-201ENST00000354376 PLEKHF1Q96S99 279 aa29.33■■■□□ 2.29
C9orf163-201ENST00000354376 PANK1Q8TE04 598 aa29.33■■■□□ 2.29
C9orf163-201ENST00000354376 TNNQ9UQP3 1299 aa29.33■■■□□ 2.29
C9orf163-201ENST00000354376 FRAT1Q92837 279 aaPredicted RBP29.32■■■□□ 2.28
C9orf163-201ENST00000354376 PDE4AP27815 886 aa29.31■■■□□ 2.28
C9orf163-201ENST00000354376 WDR63Q8IWG1 891 aa29.3■■■□□ 2.28
C9orf163-201ENST00000354376 ANKRD26Q9UPS8 1709 aa29.29■■■□□ 2.28
C9orf163-201ENST00000354376 LTKP29376 864 aa29.29■■■□□ 2.28
C9orf163-201ENST00000354376 RARSP54136 660 aaKnown RBP29.29■■■□□ 2.28
C9orf163-201ENST00000354376 TSR2Q969E8 191 aaKnown RBP29.29■■■□□ 2.28
C9orf163-201ENST00000354376 NME9Q86XW9 330 aa29.28■■■□□ 2.28
C9orf163-201ENST00000354376 CCDC27Q2M243 656 aa29.28■■■□□ 2.28
C9orf163-201ENST00000354376 COG6Q9Y2V7 657 aa29.28■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms