RNA–Protein interactions for RNA: ENST00000354361.3

SYF2-202, Transcript of SYF2 pre-mRNA splicing factor, humanhuman

TSL 2 BASIC

Gene SYF2, Length 926 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYF2-202ENST00000354361 Q3C1V9 767 aa8.36□□□□□ -1.07
SYF2-202ENST00000354361 TTC24A2A3L6 582 aaPredicted RBP8.35□□□□□ -1.07
SYF2-202ENST00000354361 TRIM32Q13049 653 aa8.34□□□□□ -1.07
SYF2-202ENST00000354361 MAP2K5Q13163 448 aa8.34□□□□□ -1.07
SYF2-202ENST00000354361 CTC1Q2NKJ3 1217 aa8.34□□□□□ -1.07
SYF2-202ENST00000354361 GMPR2Q9P2T1 348 aaKnown RBP8.34□□□□□ -1.07
SYF2-202ENST00000354361 WNT7AO00755 349 aa8.33□□□□□ -1.08
SYF2-202ENST00000354361 KDM4AO75164 1064 aa8.33□□□□□ -1.08
SYF2-202ENST00000354361 MMP16P51512 607 aa8.33□□□□□ -1.08
SYF2-202ENST00000354361 TREML4Q6UXN2 200 aa8.33□□□□□ -1.08
SYF2-202ENST00000354361 LCE2AQ5TA79 106 aaPredicted RBP8.32□□□□□ -1.08
SYF2-202ENST00000354361 HLA-CQ95604 372 aa8.32□□□□□ -1.08
SYF2-202ENST00000354361 KDM2AQ9Y2K7 1162 aa8.32□□□□□ -1.08
SYF2-202ENST00000354361 C11orf95C9JLR9 678 aaPredicted RBP8.31□□□□□ -1.08
SYF2-202ENST00000354361 SMCPP49901 116 aaPredicted RBP8.31□□□□□ -1.08
SYF2-202ENST00000354361 MDM2Q00987 491 aaPredicted RBP8.31□□□□□ -1.08
SYF2-202ENST00000354361 USB1Q9BQ65 265 aaKnown RBP8.31□□□□□ -1.08
SYF2-202ENST00000354361 DXOO77932 396 aaKnown RBP8.3□□□□□ -1.08
SYF2-202ENST00000354361 SMPD1P17405 629 aa8.3□□□□□ -1.08
SYF2-202ENST00000354361 SNIP1Q8TAD8 396 aaKnown RBP8.3□□□□□ -1.08
SYF2-202ENST00000354361 MRGPRX2Q96LB1 330 aa8.3□□□□□ -1.08
SYF2-202ENST00000354361 IRF6O14896 467 aa8.29□□□□□ -1.08
SYF2-202ENST00000354361 HOXA2O43364 376 aa8.28□□□□□ -1.08
SYF2-202ENST00000354361 USP46P62068 366 aa8.28□□□□□ -1.08
SYF2-202ENST00000354361 J3QL48 77 aa8.27□□□□□ -1.09
SYF2-202ENST00000354361 CCDC24Q8N4L8 307 aa8.27□□□□□ -1.09
SYF2-202ENST00000354361 TULP1O00294 542 aaPredicted RBP8.26□□□□□ -1.09
SYF2-202ENST00000354361 GUCA2AQ02747 115 aa8.26□□□□□ -1.09
SYF2-202ENST00000354361 CCDC102AQ96A19 550 aa8.26□□□□□ -1.09
SYF2-202ENST00000354361 REPIN1Q9BWE0 567 aaKnown RBP8.26□□□□□ -1.09
SYF2-202ENST00000354361 ATP13A2Q9NQ11 1180 aa8.26□□□□□ -1.09
SYF2-202ENST00000354361 MINK1Q8N4C8 1332 aaPredicted RBP8.26□□□□□ -1.09
SYF2-202ENST00000354361 WFS1O76024 890 aa8.25□□□□□ -1.09
SYF2-202ENST00000354361 SKOR1P84550 965 aa8.24□□□□□ -1.09
SYF2-202ENST00000354361 NFX1Q12986 1120 aaKnown RBP8.23□□□□□ -1.09
SYF2-202ENST00000354361 RC3H1Q5TC82 1133 aaKnown RBP8.23□□□□□ -1.09
SYF2-202ENST00000354361 SYMPKQ92797 1274 aaKnown RBP8.23□□□□□ -1.09
SYF2-202ENST00000354361 HPS1Q92902 700 aa8.23□□□□□ -1.09
SYF2-202ENST00000354361 GPCPD1Q9NPB8 672 aa8.23□□□□□ -1.09
SYF2-202ENST00000354361 SNRPBP14678 240 aaKnown RBP8.22□□□□□ -1.09
SYF2-202ENST00000354361 JUNDP17535 347 aa8.22□□□□□ -1.09
SYF2-202ENST00000354361 CLCN1P35523 988 aa8.22□□□□□ -1.09
SYF2-202ENST00000354361 WNT7BP56706 349 aa8.22□□□□□ -1.09
SYF2-202ENST00000354361 FAM217BQ9NTX9 383 aaPredicted RBP8.22□□□□□ -1.09
SYF2-202ENST00000354361 TRIM47Q96LD4 638 aa8.21□□□□□ -1.1
SYF2-202ENST00000354361 NUTM1Q86Y26 1132 aa8.2□□□□□ -1.1
SYF2-202ENST00000354361 SENP2Q9HC62 589 aa8.2□□□□□ -1.1
SYF2-202ENST00000354361 RETREG3Q86VR2 466 aa8.19□□□□□ -1.1
SYF2-202ENST00000354361 NUDT12Q9BQG2 462 aa8.19□□□□□ -1.1
SYF2-202ENST00000354361 ALDH1A1P00352 501 aa8.18□□□□□ -1.1
SYF2-202ENST00000354361 PTCRAQ6ISU1 281 aaPredicted RBP8.17□□□□□ -1.1
SYF2-202ENST00000354361 KRI1Q8N9T8 703 aaKnown RBP8.17□□□□□ -1.1
SYF2-202ENST00000354361 WIPF1O43516 503 aa8.16□□□□□ -1.1
SYF2-202ENST00000354361 FDX1P10109 184 aa8.16□□□□□ -1.1
SYF2-202ENST00000354361 LCE2CQ5TA81 110 aa8.16□□□□□ -1.1
SYF2-202ENST00000354361 EHBP1Q8NDI1 1231 aa8.16□□□□□ -1.1
SYF2-202ENST00000354361 KIFC2Q96AC6 838 aa8.16□□□□□ -1.1
SYF2-202ENST00000354361 PCDHGC3Q9UN70 934 aa8.16□□□□□ -1.1
SYF2-202ENST00000354361 C6orf229H3BNL8 230 aa8.15□□□□□ -1.1
SYF2-202ENST00000354361 TERTO14746 1132 aaKnown RBP8.15□□□□□ -1.1
SYF2-202ENST00000354361 VSIG10Q8N0Z9 540 aa8.14□□□□□ -1.11
SYF2-202ENST00000354361 SIAH2O43255 324 aa8.13□□□□□ -1.11
SYF2-202ENST00000354361 CCNYL3P0C7X3 344 aa8.13□□□□□ -1.11
SYF2-202ENST00000354361 MS4A1P11836 297 aa8.13□□□□□ -1.11
SYF2-202ENST00000354361 BMP1P13497 986 aa8.12□□□□□ -1.11
SYF2-202ENST00000354361 SH3BP2P78314 561 aa8.12□□□□□ -1.11
SYF2-202ENST00000354361 INSM1Q01101 510 aaPredicted RBP8.12□□□□□ -1.11
SYF2-202ENST00000354361 SPIRE2Q8WWL2 714 aa8.12□□□□□ -1.11
SYF2-202ENST00000354361 STK17AQ9UEE5 414 aa8.12□□□□□ -1.11
SYF2-202ENST00000354361 WASF2Q9Y6W5 498 aa8.12□□□□□ -1.11
SYF2-202ENST00000354361 SSTR3P32745 418 aaPredicted RBP8.11□□□□□ -1.11
SYF2-202ENST00000354361 NDUFV2P19404 249 aa8.1□□□□□ -1.11
SYF2-202ENST00000354361 TTLL12Q14166 644 aaPredicted RBP8.1□□□□□ -1.11
SYF2-202ENST00000354361 PTPRNQ16849 979 aa8.1□□□□□ -1.11
SYF2-202ENST00000354361 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.1□□□□□ -1.11
SYF2-202ENST00000354361 UNC93B1Q9H1C4 597 aa8.1□□□□□ -1.11
SYF2-202ENST00000354361 MOXD2PA6NHM9 499 aa8.09□□□□□ -1.11
SYF2-202ENST00000354361 CAPN5O15484 640 aaPredicted RBP8.09□□□□□ -1.11
SYF2-202ENST00000354361 LINC01559Q495D7 138 aa8.09□□□□□ -1.11
SYF2-202ENST00000354361 TRIM46Q7Z4K8 759 aa8.09□□□□□ -1.11
SYF2-202ENST00000354361 TLL2Q9Y6L7 1015 aa8.09□□□□□ -1.11
SYF2-202ENST00000354361 PRR7Q8TB68 274 aa8.08□□□□□ -1.12
SYF2-202ENST00000354361 BAP1Q92560 729 aa8.07□□□□□ -1.12
SYF2-202ENST00000354361 EVA1BQ9NVM1 165 aa8.07□□□□□ -1.12
SYF2-202ENST00000354361 KCNH2Q12809 1159 aa8.06□□□□□ -1.12
SYF2-202ENST00000354361 MTMR2Q13614 643 aa8.06□□□□□ -1.12
SYF2-202ENST00000354361 AMHR2Q16671 573 aa8.05□□□□□ -1.12
SYF2-202ENST00000354361 GIGYF2Q6Y7W6 1299 aaKnown RBP8.05□□□□□ -1.12
SYF2-202ENST00000354361 ZNF511Q8NB15 262 aa8.05□□□□□ -1.12
SYF2-202ENST00000354361 SLC16A10Q8TF71 515 aa8.05□□□□□ -1.12
SYF2-202ENST00000354361 NXF1Q9UBU9 619 aaKnown RBP8.05□□□□□ -1.12
SYF2-202ENST00000354361 BARGINQ6ZT62 677 aa8.04□□□□□ -1.12
SYF2-202ENST00000354361 SPDYE5A6NIY4 337 aa8.03□□□□□ -1.12
SYF2-202ENST00000354361 VEGFBP49765 207 aa8.03□□□□□ -1.12
SYF2-202ENST00000354361 NNTQ13423 1086 aa8.03□□□□□ -1.12
SYF2-202ENST00000354361 DESI1Q6ICB0 168 aa8.03□□□□□ -1.12
SYF2-202ENST00000354361 BEGAINQ9BUH8 593 aa8.03□□□□□ -1.12
SYF2-202ENST00000354361 ZMYND10O75800 440 aa8.02□□□□□ -1.13
SYF2-202ENST00000354361 VARSP26640 1264 aaKnown RBP8.02□□□□□ -1.13
SYF2-202ENST00000354361 ZFP42Q96MM3 310 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms