RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 CLCN1P35523 988 aa2.83□□□□□ -1.96
BRCA1-202ENST00000354071 RBM25P49756 843 aaKnown RBP2.83□□□□□ -1.96
BRCA1-202ENST00000354071 SAMD7Q7Z3H4 446 aa2.83□□□□□ -1.96
BRCA1-202ENST00000354071 TRAIPQ9BWF2 469 aa2.83□□□□□ -1.96
BRCA1-202ENST00000354071 CLK2P49760 499 aaKnown RBP2.83□□□□□ -1.96
BRCA1-202ENST00000354071 GLMNQ92990 594 aa2.83□□□□□ -1.96
BRCA1-202ENST00000354071 PCDHB15Q9Y5E8 787 aa2.83□□□□□ -1.96
BRCA1-202ENST00000354071 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP2.82□□□□□ -1.96
BRCA1-202ENST00000354071 G3V3G9 751 aa2.82□□□□□ -1.96
BRCA1-202ENST00000354071 GCGRP47871 477 aa2.82□□□□□ -1.96
BRCA1-202ENST00000354071 BCAMP50895 628 aa2.82□□□□□ -1.96
BRCA1-202ENST00000354071 MFAP1P55081 439 aaKnown RBP2.82□□□□□ -1.96
BRCA1-202ENST00000354071 NDUFV2P19404 249 aa2.82□□□□□ -1.96
BRCA1-202ENST00000354071 PLA2G2CQ5R387 149 aa2.82□□□□□ -1.96
BRCA1-202ENST00000354071 HMX1Q9NP08 348 aaPredicted RBP2.82□□□□□ -1.96
BRCA1-202ENST00000354071 WBP1LQ9NX94 342 aa2.82□□□□□ -1.96
BRCA1-202ENST00000354071 SWT1Q5T5J6 900 aaKnown RBP2.81□□□□□ -1.96
BRCA1-202ENST00000354071 FAM160A2Q8N612 972 aaPredicted RBP2.81□□□□□ -1.96
BRCA1-202ENST00000354071 SPIRE2Q8WWL2 714 aa2.81□□□□□ -1.96
BRCA1-202ENST00000354071 GJA5P36382 358 aa2.81□□□□□ -1.96
BRCA1-202ENST00000354071 RTL5Q5HYW3 569 aaPredicted RBP2.81□□□□□ -1.96
BRCA1-202ENST00000354071 PPP2R2DQ66LE6 453 aa2.81□□□□□ -1.96
BRCA1-202ENST00000354071 CABLES1Q8TDN4 633 aa2.81□□□□□ -1.96
BRCA1-202ENST00000354071 SERPINA10Q9UK55 444 aa2.81□□□□□ -1.96
BRCA1-202ENST00000354071 SPDYE5A6NIY4 337 aa2.81□□□□□ -1.96
BRCA1-202ENST00000354071 GJD4Q96KN9 370 aaPredicted RBP2.81□□□□□ -1.96
BRCA1-202ENST00000354071 CALR3Q96L12 384 aaKnown RBP2.81□□□□□ -1.96
BRCA1-202ENST00000354071 MOXD2PA6NHM9 499 aa2.81□□□□□ -1.96
BRCA1-202ENST00000354071 CDCA8Q53HL2 280 aa2.81□□□□□ -1.96
BRCA1-202ENST00000354071 TMCO4Q5TGY1 634 aa2.81□□□□□ -1.96
BRCA1-202ENST00000354071 EPS8L1Q8TE68 723 aa2.81□□□□□ -1.96
BRCA1-202ENST00000354071 GUCA2AQ02747 115 aa2.8□□□□□ -1.96
BRCA1-202ENST00000354071 MORN1Q5T089 497 aa2.8□□□□□ -1.96
BRCA1-202ENST00000354071 HOXA2O43364 376 aa2.8□□□□□ -1.96
BRCA1-202ENST00000354071 LILRB3O75022 631 aa2.8□□□□□ -1.96
BRCA1-202ENST00000354071 AP1G2O75843 785 aa2.8□□□□□ -1.96
BRCA1-202ENST00000354071 DNAJB2P25686 324 aa2.8□□□□□ -1.96
BRCA1-202ENST00000354071 PNMA3Q9UL41 463 aa2.8□□□□□ -1.96
BRCA1-202ENST00000354071 CFAP70Q5T0N1 1121 aa2.79□□□□□ -1.96
BRCA1-202ENST00000354071 TRIM67Q6ZTA4 783 aa2.79□□□□□ -1.96
BRCA1-202ENST00000354071 RIC3Q7Z5B4 369 aa2.79□□□□□ -1.96
BRCA1-202ENST00000354071 F12P00748 615 aaPredicted RBP2.79□□□□□ -1.96
BRCA1-202ENST00000354071 OATP04181 439 aa2.79□□□□□ -1.96
BRCA1-202ENST00000354071 ACTN4O43707 911 aaKnown RBP2.79□□□□□ -1.96
BRCA1-202ENST00000354071 RGS20O76081 388 aa2.79□□□□□ -1.96
BRCA1-202ENST00000354071 VAC14Q08AM6 782 aa2.79□□□□□ -1.96
BRCA1-202ENST00000354071 RSBN1LQ6PCB5 846 aaPredicted RBP2.79□□□□□ -1.96
BRCA1-202ENST00000354071 SALL2Q9Y467 1007 aaPredicted RBP2.79□□□□□ -1.96
BRCA1-202ENST00000354071 SPTLC1O15269 473 aa2.78□□□□□ -1.96
BRCA1-202ENST00000354071 HDGFL1Q5TGJ6 251 aa2.78□□□□□ -1.96
BRCA1-202ENST00000354071 BLOC1S3Q6QNY0 202 aa2.78□□□□□ -1.96
BRCA1-202ENST00000354071 UCN2Q96RP3 112 aa2.78□□□□□ -1.96
BRCA1-202ENST00000354071 SCNN1AP37088 669 aa2.78□□□□□ -1.96
BRCA1-202ENST00000354071 DDX11L8A8MPP1 907 aa2.78□□□□□ -1.96
BRCA1-202ENST00000354071 CFAP99D6REC4 459 aa2.78□□□□□ -1.96
BRCA1-202ENST00000354071 USP17L8P0C7I0 530 aa2.78□□□□□ -1.96
BRCA1-202ENST00000354071 SRPK2P78362 688 aaKnown RBP2.78□□□□□ -1.96
BRCA1-202ENST00000354071 NBPF26B4DH59 902 aa2.78□□□□□ -1.97
BRCA1-202ENST00000354071 MMP16P51512 607 aa2.78□□□□□ -1.97
BRCA1-202ENST00000354071 CTDSPL2Q05D32 466 aa2.78□□□□□ -1.97
BRCA1-202ENST00000354071 FUT2Q10981 343 aa2.78□□□□□ -1.97
BRCA1-202ENST00000354071 BRICD5Q6PL45 260 aa2.78□□□□□ -1.97
BRCA1-202ENST00000354071 LRRN4Q8WUT4 740 aa2.78□□□□□ -1.97
BRCA1-202ENST00000354071 RNF19BQ6ZMZ0 732 aa2.77□□□□□ -1.97
BRCA1-202ENST00000354071 TRIM34Q9BYJ4 488 aa2.77□□□□□ -1.97
BRCA1-202ENST00000354071 MYT1LQ9UL68 1186 aa2.77□□□□□ -1.97
BRCA1-202ENST00000354071 ZNF516Q92618 1163 aa2.77□□□□□ -1.97
BRCA1-202ENST00000354071 NKX2-3Q8TAU0 364 aa2.77□□□□□ -1.97
BRCA1-202ENST00000354071 UNCXA6NJT0 531 aa2.76□□□□□ -1.97
BRCA1-202ENST00000354071 SYMPKQ92797 1274 aaKnown RBP2.76□□□□□ -1.97
BRCA1-202ENST00000354071 IVNS1ABPQ9Y6Y0 642 aa2.76□□□□□ -1.97
BRCA1-202ENST00000354071 ANKRD13DQ6ZTN6 518 aa2.76□□□□□ -1.97
BRCA1-202ENST00000354071 TSC1Q92574 1164 aa2.76□□□□□ -1.97
BRCA1-202ENST00000354071 PRDM9Q9NQV7 894 aa2.76□□□□□ -1.97
BRCA1-202ENST00000354071 SLC27A5Q9Y2P5 690 aa2.76□□□□□ -1.97
BRCA1-202ENST00000354071 RNF166Q96A37 237 aaPredicted RBP2.76□□□□□ -1.97
BRCA1-202ENST00000354071 TSR3Q9UJK0 312 aaKnown RBP2.76□□□□□ -1.97
BRCA1-202ENST00000354071 RIMBP3CA6NJZ7 1639 aa2.76□□□□□ -1.97
BRCA1-202ENST00000354071 RIMBP3BA6NNM3 1639 aa2.76□□□□□ -1.97
BRCA1-202ENST00000354071 RIMBP3Q9UFD9 1639 aa2.76□□□□□ -1.97
BRCA1-202ENST00000354071 PACS2Q86VP3 889 aa2.76□□□□□ -1.97
BRCA1-202ENST00000354071 BANK1Q8NDB2 785 aa2.76□□□□□ -1.97
BRCA1-202ENST00000354071 PRR7Q8TB68 274 aa2.76□□□□□ -1.97
BRCA1-202ENST00000354071 FBXO41Q8TF61 875 aa2.76□□□□□ -1.97
BRCA1-202ENST00000354071 PALM3A6NDB9 673 aaPredicted RBP2.75□□□□□ -1.97
BRCA1-202ENST00000354071 TLL1O43897 1013 aa2.75□□□□□ -1.97
BRCA1-202ENST00000354071 TMEM88BA6NKF7 163 aa2.75□□□□□ -1.97
BRCA1-202ENST00000354071 NUTM2BA6NNL0 878 aaPredicted RBP2.75□□□□□ -1.97
BRCA1-202ENST00000354071 NUTM2EB1AL46 878 aaPredicted RBP2.75□□□□□ -1.97
BRCA1-202ENST00000354071 PER1O15534 1290 aaPredicted RBP2.75□□□□□ -1.97
BRCA1-202ENST00000354071 LMOD1P29536 600 aaPredicted RBP2.75□□□□□ -1.97
BRCA1-202ENST00000354071 NUTM2DQ5VT03 806 aaPredicted RBP2.75□□□□□ -1.97
BRCA1-202ENST00000354071 NUTM2AQ8IVF1 878 aaPredicted RBP2.75□□□□□ -1.97
BRCA1-202ENST00000354071 PBXIP1Q96AQ6 731 aa2.75□□□□□ -1.97
BRCA1-202ENST00000354071 PPP1R12CQ9BZL4 782 aa2.75□□□□□ -1.97
BRCA1-202ENST00000354071 PIK3CDO00329 1044 aa2.75□□□□□ -1.97
BRCA1-202ENST00000354071 MSS51Q4VC12 460 aa2.75□□□□□ -1.97
BRCA1-202ENST00000354071 PTCRAQ6ISU1 281 aaPredicted RBP2.75□□□□□ -1.97
BRCA1-202ENST00000354071 MTRQ99707 1265 aa2.75□□□□□ -1.97
BRCA1-202ENST00000354071 TFIP11Q9UBB9 837 aaKnown RBP2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms