RNA–Protein interactions for RNA: ENST00000353414.8

COL11A1-201, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-201ENST00000353414 OFD1O75665 1012 aa12.1□□□□□ -0.47
COL11A1-201ENST00000353414 RUFY1Q96T51 708 aa12.1□□□□□ -0.47
COL11A1-201ENST00000353414 ESCO1Q5FWF5 840 aa12.1□□□□□ -0.47
COL11A1-201ENST00000353414 CAGE1Q8TC20 777 aa12.1□□□□□ -0.47
COL11A1-201ENST00000353414 IPO9Q96P70 1041 aaKnown RBP12.1□□□□□ -0.47
COL11A1-201ENST00000353414 ANKRD62A6NC57 917 aa12.1□□□□□ -0.47
COL11A1-201ENST00000353414 LRRFIP1Q32MZ4 808 aaKnown RBP12.1□□□□□ -0.47
COL11A1-201ENST00000353414 CC2D2AQ9P2K1 1620 aa12.09□□□□□ -0.47
COL11A1-201ENST00000353414 RUFY2Q8WXA3 655 aa12.09□□□□□ -0.47
COL11A1-201ENST00000353414 RALYLQ86SE5 291 aaKnown RBP12.09□□□□□ -0.47
COL11A1-201ENST00000353414 CABP2Q9NPB3 220 aa12.09□□□□□ -0.47
COL11A1-201ENST00000353414 LNPKQ9C0E8 428 aa12.09□□□□□ -0.47
COL11A1-201ENST00000353414 SASS6Q6UVJ0 657 aa12.09□□□□□ -0.47
COL11A1-201ENST00000353414 ECM2O94769 699 aaPredicted RBP12.08□□□□□ -0.48
COL11A1-201ENST00000353414 ZKSCAN2Q63HK3 967 aa12.08□□□□□ -0.48
COL11A1-201ENST00000353414 EVC2Q86UK5 1308 aa12.08□□□□□ -0.48
COL11A1-201ENST00000353414 FMNL2Q96PY5 1086 aa12.08□□□□□ -0.48
COL11A1-201ENST00000353414 CGNL1Q0VF96 1302 aa12.08□□□□□ -0.48
COL11A1-201ENST00000353414 SMC3Q9UQE7 1217 aa12.08□□□□□ -0.48
COL11A1-201ENST00000353414 SIL1Q9H173 461 aa12.08□□□□□ -0.48
COL11A1-201ENST00000353414 KRT18P05783 430 aaKnown RBP12.08□□□□□ -0.48
COL11A1-201ENST00000353414 SAFBQ15424 915 aaKnown RBP eCLIP12.08□□□□□ -0.48
COL11A1-201ENST00000353414 KIF6Q6ZMV9 814 aa12.08□□□□□ -0.48
COL11A1-201ENST00000353414 FAM13BQ9NYF5 915 aa12.08□□□□□ -0.48
COL11A1-201ENST00000353414 MYL6BP14649 208 aa12.07□□□□□ -0.48
COL11A1-201ENST00000353414 PLCD3Q8N3E9 789 aa12.07□□□□□ -0.48
COL11A1-201ENST00000353414 HOOK1Q9UJC3 728 aaKnown RBP12.07□□□□□ -0.48
COL11A1-201ENST00000353414 DIAPH1O60610 1272 aaKnown RBP12.07□□□□□ -0.48
COL11A1-201ENST00000353414 XPCQ01831 940 aaPredicted RBP12.07□□□□□ -0.48
COL11A1-201ENST00000353414 CDK5RAP3Q96JB5 506 aa12.07□□□□□ -0.48
COL11A1-201ENST00000353414 C1orf115Q9H7X2 142 aa12.07□□□□□ -0.48
COL11A1-201ENST00000353414 IFT57Q9NWB7 429 aa12.07□□□□□ -0.48
COL11A1-201ENST00000353414 ZNF219Q9P2Y4 722 aaPredicted RBP12.07□□□□□ -0.48
COL11A1-201ENST00000353414 CCDC85AQ96PX6 553 aaPredicted RBP12.07□□□□□ -0.48
COL11A1-201ENST00000353414 KAT6BQ8WYB5 2073 aa12.07□□□□□ -0.48
COL11A1-201ENST00000353414 STK3Q13188 491 aa12.07□□□□□ -0.48
COL11A1-201ENST00000353414 CNNM1Q9NRU3 951 aa12.07□□□□□ -0.48
COL11A1-201ENST00000353414 ZSCAN29Q8IWY8 852 aaPredicted RBP12.06□□□□□ -0.48
COL11A1-201ENST00000353414 FANCD2Q9BXW9 1451 aa12.06□□□□□ -0.48
COL11A1-201ENST00000353414 DDX11L8A8MPP1 907 aa12.06□□□□□ -0.48
COL11A1-201ENST00000353414 ABTB2Q8N961 1025 aa12.06□□□□□ -0.48
COL11A1-201ENST00000353414 CCER2I3L3R5 266 aa12.06□□□□□ -0.48
COL11A1-201ENST00000353414 NEFHP12036 1026 aa12.06□□□□□ -0.48
COL11A1-201ENST00000353414 TMEM132EQ6IEE7 984 aa12.06□□□□□ -0.48
COL11A1-201ENST00000353414 GGNBP2Q9H3C7 697 aa12.06□□□□□ -0.48
COL11A1-201ENST00000353414 GPS2Q13227 327 aa12.05□□□□□ -0.48
COL11A1-201ENST00000353414 MAP7D2Q96T17 732 aa12.05□□□□□ -0.48
COL11A1-201ENST00000353414 MPNDQ8N594 471 aa12.05□□□□□ -0.48
COL11A1-201ENST00000353414 TTC16Q8NEE8 873 aa12.05□□□□□ -0.48
COL11A1-201ENST00000353414 GRM1Q13255 1194 aa12.04□□□□□ -0.48
COL11A1-201ENST00000353414 BRMS1Q9HCU9 246 aa12.04□□□□□ -0.48
COL11A1-201ENST00000353414 SPDYE4A6NLX3 237 aa12.04□□□□□ -0.48
COL11A1-201ENST00000353414 TTC39AQ5SRH9 613 aa12.04□□□□□ -0.48
COL11A1-201ENST00000353414 DNAJC5BQ9UF47 199 aa12.04□□□□□ -0.48
COL11A1-201ENST00000353414 AK7Q96M32 723 aa12.04□□□□□ -0.48
COL11A1-201ENST00000353414 ATP6V1DQ9Y5K8 247 aa12.04□□□□□ -0.48
COL11A1-201ENST00000353414 MPHOSPH10O00566 681 aaKnown RBP12.04□□□□□ -0.48
COL11A1-201ENST00000353414 SEPT11Q9NVA2 429 aaKnown RBP12.04□□□□□ -0.48
COL11A1-201ENST00000353414 FHOD3Q2V2M9 1422 aa12.03□□□□□ -0.48
COL11A1-201ENST00000353414 RNF20Q5VTR2 975 aa12.03□□□□□ -0.48
COL11A1-201ENST00000353414 RNF214Q8ND24 703 aa12.03□□□□□ -0.48
COL11A1-201ENST00000353414 FSD1Q9BTV5 496 aa12.03□□□□□ -0.48
COL11A1-201ENST00000353414 OLFM4Q6UX06 510 aa12.03□□□□□ -0.48
COL11A1-201ENST00000353414 NLRP6P59044 892 aa12.03□□□□□ -0.48
COL11A1-201ENST00000353414 SMC2O95347 1197 aa12.03□□□□□ -0.48
COL11A1-201ENST00000353414 NLRP13Q86W25 1043 aa12.02□□□□□ -0.48
COL11A1-201ENST00000353414 SYCP1Q15431 976 aa12.02□□□□□ -0.49
COL11A1-201ENST00000353414 PANK1Q8TE04 598 aa12.02□□□□□ -0.49
COL11A1-201ENST00000353414 NUP133Q8WUM0 1156 aa12.01□□□□□ -0.49
COL11A1-201ENST00000353414 PDCL3Q9H2J4 239 aa12.01□□□□□ -0.49
COL11A1-201ENST00000353414 PSMD1Q99460 953 aa12.01□□□□□ -0.49
COL11A1-201ENST00000353414 TRMT1LQ7Z2T5 733 aaKnown RBP12.01□□□□□ -0.49
COL11A1-201ENST00000353414 PDE4AP27815 886 aa12.01□□□□□ -0.49
COL11A1-201ENST00000353414 CCDC144AA2RUR9 1427 aa12.01□□□□□ -0.49
COL11A1-201ENST00000353414 UBTFL1P0CB47 393 aaPredicted RBP12.01□□□□□ -0.49
COL11A1-201ENST00000353414 SPC24Q8NBT2 197 aa12.01□□□□□ -0.49
COL11A1-201ENST00000353414 TANGO6Q9C0B7 1094 aa12□□□□□ -0.49
COL11A1-201ENST00000353414 WWC3Q9ULE0 1092 aa12□□□□□ -0.49
COL11A1-201ENST00000353414 VGFO15240 615 aaPredicted RBP12□□□□□ -0.49
COL11A1-201ENST00000353414 KIF15Q9NS87 1388 aa12□□□□□ -0.49
COL11A1-201ENST00000353414 TOM1L2Q6ZVM7 507 aa12□□□□□ -0.49
COL11A1-201ENST00000353414 MAPK8IP2Q13387 824 aaPredicted RBP12□□□□□ -0.49
COL11A1-201ENST00000353414 CCDC73Q6ZRK6 1079 aa12□□□□□ -0.49
COL11A1-201ENST00000353414 MNS1Q8NEH6 495 aa12□□□□□ -0.49
COL11A1-201ENST00000353414 USP5P45974 858 aa12□□□□□ -0.49
COL11A1-201ENST00000353414 FAM177A1Q8N128 213 aaPredicted RBP12□□□□□ -0.49
COL11A1-201ENST00000353414 TTLL12Q14166 644 aaPredicted RBP11.99□□□□□ -0.49
COL11A1-201ENST00000353414 FMN1Q68DA7 1419 aa11.99□□□□□ -0.49
COL11A1-201ENST00000353414 CADPSQ9ULU8 1353 aa11.99□□□□□ -0.49
COL11A1-201ENST00000353414 SSBP05455 408 aaKnown RBP eCLIP11.99□□□□□ -0.49
COL11A1-201ENST00000353414 MYBBP1AQ9BQG0 1328 aaKnown RBP11.99□□□□□ -0.49
COL11A1-201ENST00000353414 REC8O95072 547 aa11.99□□□□□ -0.49
COL11A1-201ENST00000353414 SDF4Q9BRK5 362 aa11.99□□□□□ -0.49
COL11A1-201ENST00000353414 CENPQQ7L2Z9 268 aaPredicted RBP11.99□□□□□ -0.49
COL11A1-201ENST00000353414 CA8P35219 290 aa11.99□□□□□ -0.49
COL11A1-201ENST00000353414 SLC4A8Q2Y0W8 1093 aa11.99□□□□□ -0.49
COL11A1-201ENST00000353414 TBC1D2BQ9UPU7 963 aa11.99□□□□□ -0.49
COL11A1-201ENST00000353414 WDR78Q5VTH9 848 aa11.98□□□□□ -0.49
COL11A1-201ENST00000353414 DZIP1LQ8IYY4 767 aaKnown RBP11.98□□□□□ -0.49
COL11A1-201ENST00000353414 TEX35Q5T0J7 233 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms