RNA–Protein interactions for RNA: ENST00000352845.3

PKP1-202, Transcript of plakophilin 1, humanhuman

TSL 5 BASIC

Gene PKP1, Length 2,244 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP1-202ENST00000352845 PLA2R1Q13018 1463 aa13.33□□□□□ -0.28
PKP1-202ENST00000352845 IBTKQ9P2D0 1353 aaPredicted RBP13.33□□□□□ -0.28
PKP1-202ENST00000352845 PANK3Q9H999 370 aa13.32□□□□□ -0.28
PKP1-202ENST00000352845 PLEKHH1Q9ULM0 1364 aa13.32□□□□□ -0.28
PKP1-202ENST00000352845 PLCH2O75038 1416 aa13.32□□□□□ -0.28
PKP1-202ENST00000352845 NASPP49321 788 aaPredicted RBP13.32□□□□□ -0.28
PKP1-202ENST00000352845 SASS6Q6UVJ0 657 aa13.32□□□□□ -0.28
PKP1-202ENST00000352845 TMEM51Q9NW97 253 aa13.32□□□□□ -0.28
PKP1-202ENST00000352845 NOL7Q9UMY1 257 aaKnown RBP13.32□□□□□ -0.28
PKP1-202ENST00000352845 WDR7Q9Y4E6 1490 aa13.31□□□□□ -0.28
PKP1-202ENST00000352845 SEC24BO95487 1268 aa13.31□□□□□ -0.28
PKP1-202ENST00000352845 DUSP27Q5VZP5 1158 aa13.31□□□□□ -0.28
PKP1-202ENST00000352845 GBP4Q96PP9 640 aa13.31□□□□□ -0.28
PKP1-202ENST00000352845 PRDM10Q9NQV6 1147 aa13.31□□□□□ -0.28
PKP1-202ENST00000352845 ADAMTS8Q9UP79 889 aa13.31□□□□□ -0.28
PKP1-202ENST00000352845 ZNF521Q96K83 1311 aa13.31□□□□□ -0.28
PKP1-202ENST00000352845 ERBINQ96RT1 1412 aa13.3□□□□□ -0.28
PKP1-202ENST00000352845 GAS2L3Q86XJ1 694 aa13.3□□□□□ -0.28
PKP1-202ENST00000352845 CIZ1Q9ULV3 898 aaPredicted RBP13.3□□□□□ -0.28
PKP1-202ENST00000352845 VGFO15240 615 aaPredicted RBP13.29□□□□□ -0.28
PKP1-202ENST00000352845 DNAJC5Q9H3Z4 198 aa13.28□□□□□ -0.28
PKP1-202ENST00000352845 MAST1Q9Y2H9 1570 aa13.28□□□□□ -0.28
PKP1-202ENST00000352845 ABCC1P33527 1531 aa13.28□□□□□ -0.28
PKP1-202ENST00000352845 MAGI2Q86UL8 1455 aa13.27□□□□□ -0.29
PKP1-202ENST00000352845 ASXL2Q76L83 1435 aa13.27□□□□□ -0.29
PKP1-202ENST00000352845 NINLQ9Y2I6 1382 aa13.27□□□□□ -0.29
PKP1-202ENST00000352845 EFCAB2Q5VUJ9 269 aa13.27□□□□□ -0.29
PKP1-202ENST00000352845 UNC13BO14795 1591 aa13.26□□□□□ -0.29
PKP1-202ENST00000352845 RGL3Q3MIN7 710 aa13.26□□□□□ -0.29
PKP1-202ENST00000352845 NCOA3Q9Y6Q9 1424 aa13.26□□□□□ -0.29
PKP1-202ENST00000352845 CGNL1Q0VF96 1302 aa13.26□□□□□ -0.29
PKP1-202ENST00000352845 RNF17Q9BXT8 1623 aaKnown RBP13.25□□□□□ -0.29
PKP1-202ENST00000352845 TRAPPC8Q9Y2L5 1435 aa13.25□□□□□ -0.29
PKP1-202ENST00000352845 ABCA9Q8IUA7 1624 aa13.25□□□□□ -0.29
PKP1-202ENST00000352845 EIF2AK4Q9P2K8 1649 aaKnown RBP13.25□□□□□ -0.29
PKP1-202ENST00000352845 PLXNC1O60486 1568 aa13.24□□□□□ -0.29
PKP1-202ENST00000352845 NPM1P06748 294 aaKnown RBP eCLIP13.24□□□□□ -0.29
PKP1-202ENST00000352845 DDIT3P35638 169 aa13.24□□□□□ -0.29
PKP1-202ENST00000352845 HSCBQ8IWL3 235 aa13.24□□□□□ -0.29
PKP1-202ENST00000352845 ZNF692Q9BU19 519 aaPredicted RBP13.24□□□□□ -0.29
PKP1-202ENST00000352845 ARAP3Q8WWN8 1544 aa13.24□□□□□ -0.29
PKP1-202ENST00000352845 PPP2R1AP30153 589 aa13.24□□□□□ -0.29
PKP1-202ENST00000352845 FTSJ3Q8IY81 847 aaKnown RBP13.24□□□□□ -0.29
PKP1-202ENST00000352845 TRMT2AQ8IZ69 625 aaKnown RBP13.23□□□□□ -0.29
PKP1-202ENST00000352845 ZKSCAN5Q9Y2L8 839 aa13.23□□□□□ -0.29
PKP1-202ENST00000352845 RBM25P49756 843 aaKnown RBP13.23□□□□□ -0.29
PKP1-202ENST00000352845 TMF1P82094 1093 aa13.23□□□□□ -0.29
PKP1-202ENST00000352845 PDLIM2Q96JY6 352 aa13.23□□□□□ -0.29
PKP1-202ENST00000352845 SLFN5Q08AF3 891 aa13.22□□□□□ -0.29
PKP1-202ENST00000352845 FANCAO15360 1455 aa13.22□□□□□ -0.29
PKP1-202ENST00000352845 IGHDP01880 384 aa13.21□□□□□ -0.29
PKP1-202ENST00000352845 CDK11BP21127 795 aaKnown RBP13.21□□□□□ -0.29
PKP1-202ENST00000352845 GOLGA2Q08379 1002 aa13.21□□□□□ -0.29
PKP1-202ENST00000352845 AMER1Q5JTC6 1135 aaPredicted RBP13.21□□□□□ -0.29
PKP1-202ENST00000352845 IQGAP3Q86VI3 1631 aa13.21□□□□□ -0.29
PKP1-202ENST00000352845 GOLGA6L22H0YM25 854 aa13.21□□□□□ -0.29
PKP1-202ENST00000352845 PDE3AQ14432 1141 aa13.21□□□□□ -0.29
PKP1-202ENST00000352845 CYB5RLQ6IPT4 315 aa13.21□□□□□ -0.29
PKP1-202ENST00000352845 MYRIPQ8NFW9 859 aa13.21□□□□□ -0.29
PKP1-202ENST00000352845 HMGN5P82970 282 aaKnown RBP13.2□□□□□ -0.3
PKP1-202ENST00000352845 SLC20A2Q08357 652 aa13.2□□□□□ -0.3
PKP1-202ENST00000352845 PRIMPOLQ96LW4 560 aa13.2□□□□□ -0.3
PKP1-202ENST00000352845 SPINK5Q9NQ38 1064 aaPredicted RBP13.2□□□□□ -0.3
PKP1-202ENST00000352845 ZNF445P59923 1031 aa13.2□□□□□ -0.3
PKP1-202ENST00000352845 XPCQ01831 940 aaPredicted RBP13.2□□□□□ -0.3
PKP1-202ENST00000352845 RAB3GAP1Q15042 981 aa13.2□□□□□ -0.3
PKP1-202ENST00000352845 SMC5Q8IY18 1101 aa13.2□□□□□ -0.3
PKP1-202ENST00000352845 AFAP1Q8N556 730 aa13.2□□□□□ -0.3
PKP1-202ENST00000352845 SPRYD3Q8NCJ5 442 aa13.2□□□□□ -0.3
PKP1-202ENST00000352845 PMFBP1Q8TBY8 1022 aa13.2□□□□□ -0.3
PKP1-202ENST00000352845 TNPO1Q92973 898 aaKnown RBP13.2□□□□□ -0.3
PKP1-202ENST00000352845 SNX21Q969T3 373 aa13.19□□□□□ -0.3
PKP1-202ENST00000352845 CCDC39Q9UFE4 941 aa13.19□□□□□ -0.3
PKP1-202ENST00000352845 ATP10AO60312 1499 aa13.19□□□□□ -0.3
PKP1-202ENST00000352845 IQGAP1P46940 1657 aa13.19□□□□□ -0.3
PKP1-202ENST00000352845 GTF2F1P35269 517 aaKnown RBP eCLIP13.19□□□□□ -0.3
PKP1-202ENST00000352845 KLHL40Q2TBA0 621 aa13.19□□□□□ -0.3
PKP1-202ENST00000352845 ZNF830Q96NB3 372 aaPredicted RBP13.19□□□□□ -0.3
PKP1-202ENST00000352845 C22orf23Q9BZE7 217 aa13.19□□□□□ -0.3
PKP1-202ENST00000352845 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.19□□□□□ -0.3
PKP1-202ENST00000352845 DUOX2Q9NRD8 1548 aa13.18□□□□□ -0.3
PKP1-202ENST00000352845 PIK3C2GO75747 1445 aa13.18□□□□□ -0.3
PKP1-202ENST00000352845 ARHGAP31Q2M1Z3 1444 aa13.18□□□□□ -0.3
PKP1-202ENST00000352845 ZFYVE16Q7Z3T8 1539 aa13.18□□□□□ -0.3
PKP1-202ENST00000352845 HSP90AB1P08238 724 aaKnown RBP13.18□□□□□ -0.3
PKP1-202ENST00000352845 WDR43Q15061 677 aaKnown RBP eCLIP13.18□□□□□ -0.3
PKP1-202ENST00000352845 CLUAP1Q96AJ1 413 aa13.18□□□□□ -0.3
PKP1-202ENST00000352845 RTEL1-TNFRSF6BF6WH68 1400 aa13.18□□□□□ -0.3
PKP1-202ENST00000352845 SYNMO15061 1565 aa13.17□□□□□ -0.3
PKP1-202ENST00000352845 CLEC17AQ6ZS10 378 aa13.17□□□□□ -0.3
PKP1-202ENST00000352845 PAXIP1Q6ZW49 1069 aaPredicted RBP13.17□□□□□ -0.3
PKP1-202ENST00000352845 ARID3AQ99856 593 aa13.17□□□□□ -0.3
PKP1-202ENST00000352845 MYOM1P52179 1685 aa13.17□□□□□ -0.3
PKP1-202ENST00000352845 ADGRL1O94910 1474 aa13.17□□□□□ -0.3
PKP1-202ENST00000352845 BCAR3O75815 825 aa13.16□□□□□ -0.3
PKP1-202ENST00000352845 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.16□□□□□ -0.3
PKP1-202ENST00000352845 SPAG9O60271 1321 aaKnown RBP13.16□□□□□ -0.3
PKP1-202ENST00000352845 NKTRP30414 1462 aaKnown RBP13.16□□□□□ -0.3
PKP1-202ENST00000352845 MADDQ8WXG6 1647 aa13.16□□□□□ -0.3
PKP1-202ENST00000352845 DNTTIP2Q5QJE6 756 aaKnown RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms