RNA–Protein interactions for RNA: ENST00000351817.4

NKX2-4-201, Transcript of NK2 homeobox 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NKX2-4, Length 2,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-4-201ENST00000351817 NBR1Q14596 966 aa28.72■■■□□ 2.19
NKX2-4-201ENST00000351817 RPGRIP1LQ68CZ1 1315 aa28.71■■■□□ 2.19
NKX2-4-201ENST00000351817 ADGRB1O14514 1584 aa28.71■■■□□ 2.19
NKX2-4-201ENST00000351817 BCL11AQ9H165 835 aa28.7■■■□□ 2.18
NKX2-4-201ENST00000351817 SPINK5Q9NQ38 1064 aaPredicted RBP28.69■■■□□ 2.18
NKX2-4-201ENST00000351817 TRAK1Q9UPV9 953 aa28.69■■■□□ 2.18
NKX2-4-201ENST00000351817 NSD3Q9BZ95 1437 aa28.68■■■□□ 2.18
NKX2-4-201ENST00000351817 DEKP35659 375 aaKnown RBP28.65■■■□□ 2.18
NKX2-4-201ENST00000351817 SKAP1Q86WV1 359 aa28.65■■■□□ 2.18
NKX2-4-201ENST00000351817 USP32Q8NFA0 1604 aa28.64■■■□□ 2.18
NKX2-4-201ENST00000351817 MORC1Q86VD1 984 aa28.63■■■□□ 2.17
NKX2-4-201ENST00000351817 SHPRHQ149N8 1683 aa28.63■■■□□ 2.17
NKX2-4-201ENST00000351817 NEXMIFQ5QGS0 1516 aa28.62■■■□□ 2.17
NKX2-4-201ENST00000351817 SLC12A5Q9H2X9 1139 aa28.61■■■□□ 2.17
NKX2-4-201ENST00000351817 PREX1Q8TCU6 1659 aa28.61■■■□□ 2.17
NKX2-4-201ENST00000351817 IDI1Q13907 227 aa28.59■■■□□ 2.17
NKX2-4-201ENST00000351817 RTL5Q5HYW3 569 aaPredicted RBP28.59■■■□□ 2.17
NKX2-4-201ENST00000351817 REREQ9P2R6 1566 aa28.59■■■□□ 2.17
NKX2-4-201ENST00000351817 TMEM132EQ6IEE7 984 aa28.59■■■□□ 2.17
NKX2-4-201ENST00000351817 BCAR3O75815 825 aa28.58■■■□□ 2.17
NKX2-4-201ENST00000351817 DDRGK1Q96HY6 314 aa28.58■■■□□ 2.17
NKX2-4-201ENST00000351817 PUS7Q96PZ0 661 aaKnown RBP28.58■■■□□ 2.17
NKX2-4-201ENST00000351817 DMRT2Q9Y5R5 561 aa28.58■■■□□ 2.17
NKX2-4-201ENST00000351817 KIF13AQ9H1H9 1805 aa28.57■■■□□ 2.16
NKX2-4-201ENST00000351817 WWC1Q8IX03 1113 aa28.57■■■□□ 2.16
NKX2-4-201ENST00000351817 NINLQ9Y2I6 1382 aa28.56■■■□□ 2.16
NKX2-4-201ENST00000351817 SLC52A1Q9NWF4 448 aa28.55■■■□□ 2.16
NKX2-4-201ENST00000351817 AGLP35573 1532 aa28.54■■■□□ 2.16
NKX2-4-201ENST00000351817 RUNDC1Q96C34 613 aa28.54■■■□□ 2.16
NKX2-4-201ENST00000351817 CGNL1Q0VF96 1302 aa28.54■■■□□ 2.16
NKX2-4-201ENST00000351817 ARHGEF28Q8N1W1 1705 aaKnown RBP28.54■■■□□ 2.16
NKX2-4-201ENST00000351817 MYO5BQ9ULV0 1848 aa28.53■■■□□ 2.16
NKX2-4-201ENST00000351817 VGFO15240 615 aaPredicted RBP28.53■■■□□ 2.16
NKX2-4-201ENST00000351817 NUTM2DQ5VT03 806 aaPredicted RBP28.53■■■□□ 2.16
NKX2-4-201ENST00000351817 PDE3AQ14432 1141 aa28.53■■■□□ 2.16
NKX2-4-201ENST00000351817 FAM161AQ3B820 660 aa28.52■■■□□ 2.16
NKX2-4-201ENST00000351817 TMEM131LA2VDJ0 1609 aa28.51■■■□□ 2.16
NKX2-4-201ENST00000351817 EVC2Q86UK5 1308 aa28.51■■■□□ 2.16
NKX2-4-201ENST00000351817 IQSEC2Q5JU85 1478 aa28.51■■■□□ 2.15
NKX2-4-201ENST00000351817 TNNT2P45379 298 aaPredicted RBP28.5■■■□□ 2.15
NKX2-4-201ENST00000351817 TULP4Q9NRJ4 1543 aa28.49■■■□□ 2.15
NKX2-4-201ENST00000351817 NSD2O96028 1365 aa28.49■■■□□ 2.15
NKX2-4-201ENST00000351817 FBXO31Q5XUX0 539 aaPredicted RBP28.49■■■□□ 2.15
NKX2-4-201ENST00000351817 CFAP53Q96M91 514 aa28.49■■■□□ 2.15
NKX2-4-201ENST00000351817 ANKRD36BQ8N2N9 1353 aa28.48■■■□□ 2.15
NKX2-4-201ENST00000351817 ZFYVE9O95405 1425 aa28.47■■■□□ 2.15
NKX2-4-201ENST00000351817 MTHFSP49914 203 aa28.46■■■□□ 2.15
NKX2-4-201ENST00000351817 PHF23Q9BUL5 403 aaPredicted RBP28.46■■■□□ 2.15
NKX2-4-201ENST00000351817 C8orf34Q49A92 452 aa28.46■■■□□ 2.15
NKX2-4-201ENST00000351817 TCP11L2Q8N4U5 519 aa28.46■■■□□ 2.15
NKX2-4-201ENST00000351817 PPM1GO15355 546 aaPredicted RBP28.45■■■□□ 2.14
NKX2-4-201ENST00000351817 WDR63Q8IWG1 891 aa28.45■■■□□ 2.14
NKX2-4-201ENST00000351817 CLTCQ00610 1675 aaKnown RBP28.44■■■□□ 2.14
NKX2-4-201ENST00000351817 CANXP27824 592 aaKnown RBP28.43■■■□□ 2.14
NKX2-4-201ENST00000351817 USP35Q9P2H5 1018 aa28.43■■■□□ 2.14
NKX2-4-201ENST00000351817 PPP6R1Q9UPN7 881 aa28.43■■■□□ 2.14
NKX2-4-201ENST00000351817 CCDC27Q2M243 656 aa28.42■■■□□ 2.14
NKX2-4-201ENST00000351817 ARHGEF40Q8TER5 1519 aa28.42■■■□□ 2.14
NKX2-4-201ENST00000351817 NEUROD2Q15784 382 aa28.42■■■□□ 2.14
NKX2-4-201ENST00000351817 NCBP3Q53F19 620 aaKnown RBP28.42■■■□□ 2.14
NKX2-4-201ENST00000351817 LAS1LQ9Y4W2 734 aaKnown RBP28.42■■■□□ 2.14
NKX2-4-201ENST00000351817 RGS3P49796 1198 aa28.41■■■□□ 2.14
NKX2-4-201ENST00000351817 RRP7AQ9Y3A4 280 aaKnown RBP28.41■■■□□ 2.14
NKX2-4-201ENST00000351817 CLUAP1Q96AJ1 413 aa28.39■■■□□ 2.14
NKX2-4-201ENST00000351817 RARSP54136 660 aaKnown RBP28.38■■■□□ 2.13
NKX2-4-201ENST00000351817 IGHDP01880 384 aa28.37■■■□□ 2.13
NKX2-4-201ENST00000351817 PANK1Q8TE04 598 aa28.37■■■□□ 2.13
NKX2-4-201ENST00000351817 NEFMP07197 916 aa28.36■■■□□ 2.13
NKX2-4-201ENST00000351817 AAMPQ13685 434 aa28.36■■■□□ 2.13
NKX2-4-201ENST00000351817 CABP2Q9NPB3 220 aa28.36■■■□□ 2.13
NKX2-4-201ENST00000351817 COG6Q9Y2V7 657 aa28.36■■■□□ 2.13
NKX2-4-201ENST00000351817 VIRMAQ69YN4 1812 aaKnown RBP28.34■■■□□ 2.13
NKX2-4-201ENST00000351817 SPATA31D1Q6ZQQ2 1576 aa28.34■■■□□ 2.13
NKX2-4-201ENST00000351817 MLECQ14165 292 aa28.33■■■□□ 2.13
NKX2-4-201ENST00000351817 FRAT1Q92837 279 aaPredicted RBP28.33■■■□□ 2.13
NKX2-4-201ENST00000351817 ADGRB2O60241 1585 aa28.33■■■□□ 2.13
NKX2-4-201ENST00000351817 ABCC11Q96J66 1382 aa28.32■■■□□ 2.12
NKX2-4-201ENST00000351817 MYH16Q9H6N6 1097 aa28.31■■■□□ 2.12
NKX2-4-201ENST00000351817 DAXXQ9UER7 740 aaPredicted RBP28.31■■■□□ 2.12
NKX2-4-201ENST00000351817 U2AF1L5P0DN76 240 aaPredicted RBP28.31■■■□□ 2.12
NKX2-4-201ENST00000351817 U2AF1Q01081 240 aaKnown RBP eCLIP28.31■■■□□ 2.12
NKX2-4-201ENST00000351817 SENP3Q9H4L4 574 aaPredicted RBP28.31■■■□□ 2.12
NKX2-4-201ENST00000351817 MAPK8IP3Q9UPT6 1336 aa28.3■■■□□ 2.12
NKX2-4-201ENST00000351817 A0A1W2PP64 1363 aa28.29■■■□□ 2.12
NKX2-4-201ENST00000351817 SAFB2Q14151 953 aaKnown RBP eCLIP28.28■■■□□ 2.12
NKX2-4-201ENST00000351817 PMFBP1Q8TBY8 1022 aa28.27■■■□□ 2.12
NKX2-4-201ENST00000351817 SRPK2P78362 688 aaKnown RBP28.27■■■□□ 2.12
NKX2-4-201ENST00000351817 STK26Q9P289 416 aa28.27■■■□□ 2.12
NKX2-4-201ENST00000351817 PTPRMP28827 1452 aa28.26■■■□□ 2.12
NKX2-4-201ENST00000351817 ATAD2Q6PL18 1390 aa28.26■■■□□ 2.11
NKX2-4-201ENST00000351817 ANKRD26Q9UPS8 1709 aa28.26■■■□□ 2.11
NKX2-4-201ENST00000351817 A2ML1A8K2U0 1454 aa28.26■■■□□ 2.11
NKX2-4-201ENST00000351817 STAG3Q9UJ98 1225 aa28.24■■■□□ 2.11
NKX2-4-201ENST00000351817 ALKQ9UM73 1620 aa28.24■■■□□ 2.11
NKX2-4-201ENST00000351817 MED14O60244 1454 aa28.23■■■□□ 2.11
NKX2-4-201ENST00000351817 TERF2IPQ9NYB0 399 aa28.22■■■□□ 2.11
NKX2-4-201ENST00000351817 YTHDC2Q9H6S0 1430 aaKnown RBP28.21■■■□□ 2.11
NKX2-4-201ENST00000351817 CT47B1P0C2W7 299 aaPredicted RBP28.21■■■□□ 2.11
NKX2-4-201ENST00000351817 RLBP1P12271 317 aa28.21■■■□□ 2.11
NKX2-4-201ENST00000351817 SLC4A3P48751 1232 aa28.21■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms