RNA–Protein interactions for RNA: ENST00000350498.7

PDAP1-201, Transcript of PDGFA associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDAP1, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-201ENST00000350498 SBNO2Q9Y2G9 1366 aa21.72■■□□□ 1.07
PDAP1-201ENST00000350498 SETBP1Q9Y6X0 1596 aa21.72■■□□□ 1.07
PDAP1-201ENST00000350498 TRMT2AQ8IZ69 625 aaKnown RBP21.71■■□□□ 1.07
PDAP1-201ENST00000350498 MTHFSP49914 203 aa21.7■■□□□ 1.06
PDAP1-201ENST00000350498 RTL5Q5HYW3 569 aaPredicted RBP21.7■■□□□ 1.06
PDAP1-201ENST00000350498 ZC3H13Q5T200 1668 aaKnown RBP21.7■■□□□ 1.06
PDAP1-201ENST00000350498 GLI2P10070 1586 aa21.69■■□□□ 1.06
PDAP1-201ENST00000350498 NEXMIFQ5QGS0 1516 aa21.69■■□□□ 1.06
PDAP1-201ENST00000350498 NEO1Q92859 1461 aa21.68■■□□□ 1.06
PDAP1-201ENST00000350498 VGFO15240 615 aaPredicted RBP21.68■■□□□ 1.06
PDAP1-201ENST00000350498 MYO5BQ9ULV0 1848 aa21.68■■□□□ 1.06
PDAP1-201ENST00000350498 RPGRIP1LQ68CZ1 1315 aa21.68■■□□□ 1.06
PDAP1-201ENST00000350498 RICTORQ6R327 1708 aa21.67■■□□□ 1.06
PDAP1-201ENST00000350498 WWC1Q8IX03 1113 aa21.67■■□□□ 1.06
PDAP1-201ENST00000350498 TULP4Q9NRJ4 1543 aa21.67■■□□□ 1.06
PDAP1-201ENST00000350498 SLC24A1O60721 1099 aa21.66■■□□□ 1.06
PDAP1-201ENST00000350498 SLC4A3P48751 1232 aa21.66■■□□□ 1.06
PDAP1-201ENST00000350498 MINK1Q8N4C8 1332 aaPredicted RBP21.65■■□□□ 1.06
PDAP1-201ENST00000350498 PIK3C2BO00750 1634 aa21.65■■□□□ 1.06
PDAP1-201ENST00000350498 FAM69CQ0P6D2 419 aa21.65■■□□□ 1.06
PDAP1-201ENST00000350498 POLR3AO14802 1390 aaPredicted RBP21.64■■□□□ 1.05
PDAP1-201ENST00000350498 MS4A1P11836 297 aa21.64■■□□□ 1.05
PDAP1-201ENST00000350498 ARHGEF28Q8N1W1 1705 aaKnown RBP21.63■■□□□ 1.05
PDAP1-201ENST00000350498 SHPRHQ149N8 1683 aa21.63■■□□□ 1.05
PDAP1-201ENST00000350498 KDM2BQ8NHM5 1336 aa21.63■■□□□ 1.05
PDAP1-201ENST00000350498 SRPK2P78362 688 aaKnown RBP21.63■■□□□ 1.05
PDAP1-201ENST00000350498 TCP11L2Q8N4U5 519 aa21.63■■□□□ 1.05
PDAP1-201ENST00000350498 EVC2Q86UK5 1308 aa21.62■■□□□ 1.05
PDAP1-201ENST00000350498 NEFMP07197 916 aa21.62■■□□□ 1.05
PDAP1-201ENST00000350498 GGNBP2Q9H3C7 697 aa21.62■■□□□ 1.05
PDAP1-201ENST00000350498 MLECQ14165 292 aa21.62■■□□□ 1.05
PDAP1-201ENST00000350498 NKTRP30414 1462 aaKnown RBP21.61■■□□□ 1.05
PDAP1-201ENST00000350498 TNNQ9UQP3 1299 aa21.61■■□□□ 1.05
PDAP1-201ENST00000350498 E9PSI1 815 aa21.61■■□□□ 1.05
PDAP1-201ENST00000350498 PRAM1Q96QH2 718 aa21.61■■□□□ 1.05
PDAP1-201ENST00000350498 CGNL1Q0VF96 1302 aa21.6■■□□□ 1.05
PDAP1-201ENST00000350498 BCL2L13Q9BXK5 485 aa21.6■■□□□ 1.05
PDAP1-201ENST00000350498 TSPOAP1O95153 1857 aa21.59■■□□□ 1.05
PDAP1-201ENST00000350498 FBLN1P23142 703 aa21.59■■□□□ 1.05
PDAP1-201ENST00000350498 PANK1Q8TE04 598 aa21.59■■□□□ 1.05
PDAP1-201ENST00000350498 A0A1W2PP64 1363 aa21.57■■□□□ 1.04
PDAP1-201ENST00000350498 FRAT1Q92837 279 aaPredicted RBP21.57■■□□□ 1.04
PDAP1-201ENST00000350498 RUNDC1Q96C34 613 aa21.57■■□□□ 1.04
PDAP1-201ENST00000350498 RGS3P49796 1198 aa21.56■■□□□ 1.04
PDAP1-201ENST00000350498 SLC52A1Q9NWF4 448 aa21.56■■□□□ 1.04
PDAP1-201ENST00000350498 U2AF1L5P0DN76 240 aaPredicted RBP21.56■■□□□ 1.04
PDAP1-201ENST00000350498 U2AF1Q01081 240 aaKnown RBP eCLIP21.56■■□□□ 1.04
PDAP1-201ENST00000350498 COG6Q9Y2V7 657 aa21.55■■□□□ 1.04
PDAP1-201ENST00000350498 ARHGAP31Q2M1Z3 1444 aa21.55■■□□□ 1.04
PDAP1-201ENST00000350498 ANKRD36BQ8N2N9 1353 aa21.55■■□□□ 1.04
PDAP1-201ENST00000350498 IGHDP01880 384 aa21.55■■□□□ 1.04
PDAP1-201ENST00000350498 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.54■■□□□ 1.04
PDAP1-201ENST00000350498 POGKQ9P215 609 aa21.54■■□□□ 1.04
PDAP1-201ENST00000350498 STAG3Q9UJ98 1225 aa21.54■■□□□ 1.04
PDAP1-201ENST00000350498 PREX1Q8TCU6 1659 aa21.54■■□□□ 1.04
PDAP1-201ENST00000350498 WAPLQ7Z5K2 1190 aa21.53■■□□□ 1.04
PDAP1-201ENST00000350498 TMEM131LA2VDJ0 1609 aa21.53■■□□□ 1.04
PDAP1-201ENST00000350498 U2SURPO15042 1029 aaKnown RBP21.51■■□□□ 1.03
PDAP1-201ENST00000350498 CENPQQ7L2Z9 268 aaPredicted RBP21.51■■□□□ 1.03
PDAP1-201ENST00000350498 PTPRMP28827 1452 aa21.51■■□□□ 1.03
PDAP1-201ENST00000350498 FYB1O15117 783 aa21.5■■□□□ 1.03
PDAP1-201ENST00000350498 IL27Q8NEV9 243 aa21.5■■□□□ 1.03
PDAP1-201ENST00000350498 RLBP1P12271 317 aa21.49■■□□□ 1.03
PDAP1-201ENST00000350498 CANXP27824 592 aaKnown RBP21.49■■□□□ 1.03
PDAP1-201ENST00000350498 C8orf34Q49A92 452 aa21.49■■□□□ 1.03
PDAP1-201ENST00000350498 CLUAP1Q96AJ1 413 aa21.49■■□□□ 1.03
PDAP1-201ENST00000350498 CABP1Q9NZU7 370 aa21.49■■□□□ 1.03
PDAP1-201ENST00000350498 IQSEC2Q5JU85 1478 aa21.48■■□□□ 1.03
PDAP1-201ENST00000350498 YTHDC2Q9H6S0 1430 aaKnown RBP21.48■■□□□ 1.03
PDAP1-201ENST00000350498 TSR2Q969E8 191 aaKnown RBP21.48■■□□□ 1.03
PDAP1-201ENST00000350498 CFAP53Q96M91 514 aa21.48■■□□□ 1.03
PDAP1-201ENST00000350498 CDK19Q9BWU1 502 aa21.48■■□□□ 1.03
PDAP1-201ENST00000350498 RARSP54136 660 aaKnown RBP21.48■■□□□ 1.03
PDAP1-201ENST00000350498 PHF23Q9BUL5 403 aaPredicted RBP21.48■■□□□ 1.03
PDAP1-201ENST00000350498 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.46■■□□□ 1.035e-6■■□□□ 11.8
PDAP1-201ENST00000350498 CD163L1Q9NR16 1453 aa21.46■■□□□ 1.03
PDAP1-201ENST00000350498 RTN4Q9NQC3 1192 aaKnown RBP21.46■■□□□ 1.03
PDAP1-201ENST00000350498 ZFYVE9O95405 1425 aa21.45■■□□□ 1.02
PDAP1-201ENST00000350498 USP32Q8NFA0 1604 aa21.44■■□□□ 1.02
PDAP1-201ENST00000350498 ABCC11Q96J66 1382 aa21.44■■□□□ 1.02
PDAP1-201ENST00000350498 NCKAP5LQ9HCH0 1330 aa21.43■■□□□ 1.02
PDAP1-201ENST00000350498 RIMBP3CA6NJZ7 1639 aa21.43■■□□□ 1.02
PDAP1-201ENST00000350498 RIMBP3BA6NNM3 1639 aa21.43■■□□□ 1.02
PDAP1-201ENST00000350498 RIMBP3Q9UFD9 1639 aa21.43■■□□□ 1.02
PDAP1-201ENST00000350498 ALKQ9UM73 1620 aa21.43■■□□□ 1.02
PDAP1-201ENST00000350498 PPM1GO15355 546 aaPredicted RBP21.43■■□□□ 1.02
PDAP1-201ENST00000350498 FAM161AQ3B820 660 aa21.42■■□□□ 1.02
PDAP1-201ENST00000350498 PUS7Q96PZ0 661 aaKnown RBP21.42■■□□□ 1.02
PDAP1-201ENST00000350498 PLEKHF1Q96S99 279 aa21.4■■□□□ 1.02
PDAP1-201ENST00000350498 DIP2BQ9P265 1576 aa21.4■■□□□ 1.02
PDAP1-201ENST00000350498 WDR63Q8IWG1 891 aa21.39■■□□□ 1.02
PDAP1-201ENST00000350498 DDRGK1Q96HY6 314 aa21.39■■□□□ 1.02
PDAP1-201ENST00000350498 CLTCQ00610 1675 aaKnown RBP21.39■■□□□ 1.02
PDAP1-201ENST00000350498 NGEFQ8N5V2 710 aa21.39■■□□□ 1.01
PDAP1-201ENST00000350498 ZRANB1Q9UGI0 708 aa21.39■■□□□ 1.01
PDAP1-201ENST00000350498 PCDHB15Q9Y5E8 787 aa21.39■■□□□ 1.01
PDAP1-201ENST00000350498 PDE3AQ14432 1141 aa21.38■■□□□ 1.01
PDAP1-201ENST00000350498 NFKBIBQ15653 356 aa21.38■■□□□ 1.01
PDAP1-201ENST00000350498 TERF2IPQ9NYB0 399 aa21.38■■□□□ 1.01
PDAP1-201ENST00000350498 TRIM35Q9UPQ4 493 aa21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms