RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 NUTM2DQ5VT03 806 aaPredicted RBP23.85■■□□□ 1.41
SCARF1-202ENST00000348987 GZF1Q9H116 711 aaPredicted RBP23.85■■□□□ 1.41
SCARF1-202ENST00000348987 NPC1L1Q9UHC9 1359 aa23.85■■□□□ 1.41
SCARF1-202ENST00000348987 ABCA6Q8N139 1617 aa23.85■■□□□ 1.41
SCARF1-202ENST00000348987 HSP90AA1P07900 732 aaKnown RBP23.84■■□□□ 1.41
SCARF1-202ENST00000348987 MAP3K4Q9Y6R4 1608 aa23.83■■□□□ 1.41
SCARF1-202ENST00000348987 FSD2A1L4K1 749 aa23.81■■□□□ 1.4
SCARF1-202ENST00000348987 KDM5AP29375 1690 aaKnown RBP23.81■■□□□ 1.4
SCARF1-202ENST00000348987 ZNF518AQ6AHZ1 1483 aa23.81■■□□□ 1.4
SCARF1-202ENST00000348987 TRMT2AQ8IZ69 625 aaKnown RBP23.81■■□□□ 1.4
SCARF1-202ENST00000348987 TRAK1Q9UPV9 953 aa23.81■■□□□ 1.4
SCARF1-202ENST00000348987 VIRMAQ69YN4 1812 aaKnown RBP23.8■■□□□ 1.4
SCARF1-202ENST00000348987 RRP9O43818 475 aaKnown RBP23.8■■□□□ 1.4
SCARF1-202ENST00000348987 SPRYD3Q8NCJ5 442 aa23.8■■□□□ 1.4
SCARF1-202ENST00000348987 MYOM2P54296 1465 aa23.8■■□□□ 1.4
SCARF1-202ENST00000348987 TNNT2P45379 298 aaPredicted RBP23.8■■□□□ 1.4
SCARF1-202ENST00000348987 NOS1P29475 1434 aa23.79■■□□□ 1.4
SCARF1-202ENST00000348987 NLRP1Q9C000 1473 aa23.79■■□□□ 1.4
SCARF1-202ENST00000348987 TBC1D2Q9BYX2 928 aa23.79■■□□□ 1.4
SCARF1-202ENST00000348987 EFCAB6Q5THR3 1501 aa23.79■■□□□ 1.4
SCARF1-202ENST00000348987 TMEM132EQ6IEE7 984 aa23.79■■□□□ 1.4
SCARF1-202ENST00000348987 KIAA1210Q9ULL0 1709 aa23.78■■□□□ 1.4
SCARF1-202ENST00000348987 MAPK8IP3Q9UPT6 1336 aa23.78■■□□□ 1.4
SCARF1-202ENST00000348987 PPRC1Q5VV67 1664 aaKnown RBP23.77■■□□□ 1.4
SCARF1-202ENST00000348987 MROH2AA6NES4 1674 aa23.77■■□□□ 1.4
SCARF1-202ENST00000348987 CYB5RLQ6IPT4 315 aa23.77■■□□□ 1.4
SCARF1-202ENST00000348987 SLC12A5Q9H2X9 1139 aa23.77■■□□□ 1.4
SCARF1-202ENST00000348987 MCM4P33991 863 aa23.75■■□□□ 1.39
SCARF1-202ENST00000348987 POGZQ7Z3K3 1410 aa23.75■■□□□ 1.39
SCARF1-202ENST00000348987 CENPJQ9HC77 1338 aaPredicted RBP23.75■■□□□ 1.39
SCARF1-202ENST00000348987 UPF2Q9HAU5 1272 aaKnown RBP23.73■■□□□ 1.39
SCARF1-202ENST00000348987 NEURL4Q96JN8 1562 aa23.73■■□□□ 1.39
SCARF1-202ENST00000348987 CLUAP1Q96AJ1 413 aa23.73■■□□□ 1.39
SCARF1-202ENST00000348987 TBC1D32Q96NH3 1257 aa23.73■■□□□ 1.39
SCARF1-202ENST00000348987 COG6Q9Y2V7 657 aa23.72■■□□□ 1.39
SCARF1-202ENST00000348987 NKTRP30414 1462 aaKnown RBP23.72■■□□□ 1.39
SCARF1-202ENST00000348987 KIF1BO60333 1816 aa23.72■■□□□ 1.39
SCARF1-202ENST00000348987 NRXN1Q9ULB1 1477 aa23.72■■□□□ 1.39
SCARF1-202ENST00000348987 NPATQ14207 1427 aa23.72■■□□□ 1.39
SCARF1-202ENST00000348987 NEUROD2Q15784 382 aa23.71■■□□□ 1.39
SCARF1-202ENST00000348987 PANK1Q8TE04 598 aa23.71■■□□□ 1.39
SCARF1-202ENST00000348987 CGNL1Q0VF96 1302 aa23.7■■□□□ 1.38
SCARF1-202ENST00000348987 E9PSI1 815 aa23.7■■□□□ 1.38
SCARF1-202ENST00000348987 FRMPD1Q5SYB0 1578 aa23.7■■□□□ 1.38
SCARF1-202ENST00000348987 NSD3Q9BZ95 1437 aa23.7■■□□□ 1.38
SCARF1-202ENST00000348987 RRP7AQ9Y3A4 280 aaKnown RBP23.7■■□□□ 1.38
SCARF1-202ENST00000348987 SLC24A1O60721 1099 aa23.69■■□□□ 1.38
SCARF1-202ENST00000348987 IFT172Q9UG01 1749 aa23.69■■□□□ 1.38
SCARF1-202ENST00000348987 TRAK2O60296 914 aa23.69■■□□□ 1.38
SCARF1-202ENST00000348987 WWC1Q8IX03 1113 aa23.68■■□□□ 1.38
SCARF1-202ENST00000348987 C14orf93Q9H972 538 aaKnown RBP23.68■■□□□ 1.38
SCARF1-202ENST00000348987 SBNO2Q9Y2G9 1366 aa23.68■■□□□ 1.38
SCARF1-202ENST00000348987 MORC1Q86VD1 984 aa23.67■■□□□ 1.38
SCARF1-202ENST00000348987 CANXP27824 592 aaKnown RBP23.67■■□□□ 1.38
SCARF1-202ENST00000348987 MRE11P49959 708 aa23.67■■□□□ 1.38
SCARF1-202ENST00000348987 ADGRB3O60242 1522 aa23.67■■□□□ 1.38
SCARF1-202ENST00000348987 PDE3AQ14432 1141 aa23.66■■□□□ 1.38
SCARF1-202ENST00000348987 MYH16Q9H6N6 1097 aa23.65■■□□□ 1.38
SCARF1-202ENST00000348987 POLR3AO14802 1390 aaPredicted RBP23.65■■□□□ 1.38
SCARF1-202ENST00000348987 ERBB4Q15303 1308 aa23.65■■□□□ 1.38
SCARF1-202ENST00000348987 ESPNB1AK53 854 aa23.64■■□□□ 1.38
SCARF1-202ENST00000348987 HECW2Q9P2P5 1572 aa23.64■■□□□ 1.38
SCARF1-202ENST00000348987 LMTK2Q8IWU2 1503 aa23.64■■□□□ 1.38
SCARF1-202ENST00000348987 MLH3Q9UHC1 1453 aa23.64■■□□□ 1.38
SCARF1-202ENST00000348987 GRPEL1Q9HAV7 217 aa23.63■■□□□ 1.37
SCARF1-202ENST00000348987 SAFB2Q14151 953 aaKnown RBP eCLIP23.62■■□□□ 1.37
SCARF1-202ENST00000348987 CFAP74Q9C0B2 1584 aa23.62■■□□□ 1.37
SCARF1-202ENST00000348987 MYO3AQ8NEV4 1616 aa23.61■■□□□ 1.37
SCARF1-202ENST00000348987 ADGRB1O14514 1584 aa23.61■■□□□ 1.37
SCARF1-202ENST00000348987 MTHFSP49914 203 aa23.61■■□□□ 1.37
SCARF1-202ENST00000348987 CHMP5Q9NZZ3 219 aa23.61■■□□□ 1.37
SCARF1-202ENST00000348987 YEATS2Q9ULM3 1422 aa23.6■■□□□ 1.37
SCARF1-202ENST00000348987 TCP11L2Q8N4U5 519 aa23.6■■□□□ 1.37
SCARF1-202ENST00000348987 PDZRN3Q9UPQ7 1066 aa23.59■■□□□ 1.37
SCARF1-202ENST00000348987 PCDHB15Q9Y5E8 787 aa23.59■■□□□ 1.37
SCARF1-202ENST00000348987 SETBP1Q9Y6X0 1596 aa23.58■■□□□ 1.36
SCARF1-202ENST00000348987 PMFBP1Q8TBY8 1022 aa23.56■■□□□ 1.36
SCARF1-202ENST00000348987 TNNQ9UQP3 1299 aa23.56■■□□□ 1.36
SCARF1-202ENST00000348987 IDI1Q13907 227 aa23.55■■□□□ 1.36
SCARF1-202ENST00000348987 RUNDC1Q96C34 613 aa23.55■■□□□ 1.36
SCARF1-202ENST00000348987 BCL2L13Q9BXK5 485 aa23.55■■□□□ 1.36
SCARF1-202ENST00000348987 ABCC3O15438 1527 aa23.55■■□□□ 1.36
SCARF1-202ENST00000348987 QRICH2Q9H0J4 1663 aa23.54■■□□□ 1.36
SCARF1-202ENST00000348987 TRIM44Q96DX7 344 aaPredicted RBP23.54■■□□□ 1.36
SCARF1-202ENST00000348987 CABP2Q9NPB3 220 aa23.54■■□□□ 1.36
SCARF1-202ENST00000348987 SHPRHQ149N8 1683 aa23.54■■□□□ 1.36
SCARF1-202ENST00000348987 PPLO60437 1756 aa23.54■■□□□ 1.36
SCARF1-202ENST00000348987 NGEFQ8N5V2 710 aa23.54■■□□□ 1.36
SCARF1-202ENST00000348987 NEO1Q92859 1461 aa23.54■■□□□ 1.36
SCARF1-202ENST00000348987 STK26Q9P289 416 aa23.53■■□□□ 1.36
SCARF1-202ENST00000348987 FAM69CQ0P6D2 419 aa23.52■■□□□ 1.36
SCARF1-202ENST00000348987 FBXO31Q5XUX0 539 aaPredicted RBP23.52■■□□□ 1.36
SCARF1-202ENST00000348987 C22orf23Q9BZE7 217 aa23.52■■□□□ 1.36
SCARF1-202ENST00000348987 NINLQ9Y2I6 1382 aa23.52■■□□□ 1.36
SCARF1-202ENST00000348987 RARSP54136 660 aaKnown RBP23.51■■□□□ 1.35
SCARF1-202ENST00000348987 MFAP1P55081 439 aaKnown RBP23.51■■□□□ 1.35
SCARF1-202ENST00000348987 SIGLEC1Q9BZZ2 1709 aa23.51■■□□□ 1.35
SCARF1-202ENST00000348987 DIP2CQ9Y2E4 1556 aa23.51■■□□□ 1.35
SCARF1-202ENST00000348987 RLBP1P12271 317 aa23.51■■□□□ 1.35
SCARF1-202ENST00000348987 PHF23Q9BUL5 403 aaPredicted RBP23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms