RNA–Protein interactions for RNA: ENST00000348749.9

CHRNA1-202, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA1, Length 1,984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-202ENST00000348749 VWDEQ8N2E2 1590 aa13.14□□□□□ -0.31
CHRNA1-202ENST00000348749 MYOM2P54296 1465 aa13.14□□□□□ -0.31
CHRNA1-202ENST00000348749 MYH16Q9H6N6 1097 aa13.14□□□□□ -0.31
CHRNA1-202ENST00000348749 CHD1O14646 1710 aa13.13□□□□□ -0.31
CHRNA1-202ENST00000348749 PDE3AQ14432 1141 aa13.13□□□□□ -0.31
CHRNA1-202ENST00000348749 MYO3AQ8NEV4 1616 aa13.13□□□□□ -0.31
CHRNA1-202ENST00000348749 TRAK2O60296 914 aa13.12□□□□□ -0.31
CHRNA1-202ENST00000348749 GRPEL1Q9HAV7 217 aa13.12□□□□□ -0.31
CHRNA1-202ENST00000348749 SBNO2Q9Y2G9 1366 aa13.12□□□□□ -0.31
CHRNA1-202ENST00000348749 CHMP5Q9NZZ3 219 aa13.12□□□□□ -0.31
CHRNA1-202ENST00000348749 ZFYVE16Q7Z3T8 1539 aa13.12□□□□□ -0.31
CHRNA1-202ENST00000348749 ERBB4Q15303 1308 aa13.11□□□□□ -0.31
CHRNA1-202ENST00000348749 MAP3K4Q9Y6R4 1608 aa13.11□□□□□ -0.31
CHRNA1-202ENST00000348749 CALD1Q05682 793 aaKnown RBP13.11□□□□□ -0.31
CHRNA1-202ENST00000348749 ZCCHC11Q5TAX3 1644 aaKnown RBP13.1□□□□□ -0.31
CHRNA1-202ENST00000348749 DDX11L8A8MPP1 907 aa13.1□□□□□ -0.31
CHRNA1-202ENST00000348749 NCBP3Q53F19 620 aaKnown RBP13.1□□□□□ -0.31
CHRNA1-202ENST00000348749 ARXQ96QS3 562 aa13.1□□□□□ -0.31
CHRNA1-202ENST00000348749 POLR3AO14802 1390 aaPredicted RBP13.1□□□□□ -0.31
CHRNA1-202ENST00000348749 KANK1Q14678 1352 aa13.1□□□□□ -0.31
CHRNA1-202ENST00000348749 CLUAP1Q96AJ1 413 aa13.09□□□□□ -0.31
CHRNA1-202ENST00000348749 GZF1Q9H116 711 aaPredicted RBP13.09□□□□□ -0.31
CHRNA1-202ENST00000348749 IFT172Q9UG01 1749 aa13.08□□□□□ -0.31
CHRNA1-202ENST00000348749 PODXL2Q9NZ53 605 aa13.08□□□□□ -0.32
CHRNA1-202ENST00000348749 TRAPPC8Q9Y2L5 1435 aa13.08□□□□□ -0.32
CHRNA1-202ENST00000348749 INO80Q9ULG1 1556 aaPredicted RBP13.08□□□□□ -0.32
CHRNA1-202ENST00000348749 KIF1BO60333 1816 aa13.07□□□□□ -0.32
CHRNA1-202ENST00000348749 ERVK-7P63135 1459 aa13.07□□□□□ -0.32
CHRNA1-202ENST00000348749 TRIM44Q96DX7 344 aaPredicted RBP13.07□□□□□ -0.32
CHRNA1-202ENST00000348749 SPAG9O60271 1321 aaKnown RBP13.07□□□□□ -0.32
CHRNA1-202ENST00000348749 BCAR3O75815 825 aa13.07□□□□□ -0.32
CHRNA1-202ENST00000348749 SETBP1Q9Y6X0 1596 aa13.07□□□□□ -0.32
CHRNA1-202ENST00000348749 NRXN1Q9ULB1 1477 aa13.06□□□□□ -0.32
CHRNA1-202ENST00000348749 USP32Q8NFA0 1604 aa13.06□□□□□ -0.32
CHRNA1-202ENST00000348749 TERF1P54274 439 aa13.06□□□□□ -0.32
CHRNA1-202ENST00000348749 PMFBP1Q8TBY8 1022 aa13.06□□□□□ -0.32
CHRNA1-202ENST00000348749 ABCA6Q8N139 1617 aa13.06□□□□□ -0.32
CHRNA1-202ENST00000348749 APAF1O14727 1248 aa13.05□□□□□ -0.32
CHRNA1-202ENST00000348749 NCOA3Q9Y6Q9 1424 aa13.04□□□□□ -0.32
CHRNA1-202ENST00000348749 ATP7AQ04656 1500 aa13.04□□□□□ -0.32
CHRNA1-202ENST00000348749 ZNF692Q9BU19 519 aaPredicted RBP13.03□□□□□ -0.32
CHRNA1-202ENST00000348749 PRDM4Q9UKN5 801 aa13.03□□□□□ -0.32
CHRNA1-202ENST00000348749 MAP7D2Q96T17 732 aa13.03□□□□□ -0.32
CHRNA1-202ENST00000348749 SPINK5Q9NQ38 1064 aaPredicted RBP13.03□□□□□ -0.32
CHRNA1-202ENST00000348749 LMTK2Q8IWU2 1503 aa13.02□□□□□ -0.32
CHRNA1-202ENST00000348749 ABCA9Q8IUA7 1624 aa13.02□□□□□ -0.32
CHRNA1-202ENST00000348749 SHPRHQ149N8 1683 aa13.02□□□□□ -0.32
CHRNA1-202ENST00000348749 PTMSP20962 102 aa13.02□□□□□ -0.32
CHRNA1-202ENST00000348749 KIAA1211Q6ZU35 1233 aa13.02□□□□□ -0.32
CHRNA1-202ENST00000348749 DDIT3P35638 169 aa13.01□□□□□ -0.33
CHRNA1-202ENST00000348749 EFCAB6Q5THR3 1501 aa13.01□□□□□ -0.33
CHRNA1-202ENST00000348749 CCDC173Q0VFZ6 552 aa13.01□□□□□ -0.33
CHRNA1-202ENST00000348749 WDR63Q8IWG1 891 aa13.01□□□□□ -0.33
CHRNA1-202ENST00000348749 PPP1R9BQ96SB3 815 aa13.01□□□□□ -0.33
CHRNA1-202ENST00000348749 FANCAO15360 1455 aa13.01□□□□□ -0.33
CHRNA1-202ENST00000348749 IQSEC2Q5JU85 1478 aa13.01□□□□□ -0.33
CHRNA1-202ENST00000348749 ZC3H13Q5T200 1668 aaKnown RBP13.01□□□□□ -0.33
CHRNA1-202ENST00000348749 MROH1Q8NDA8 1641 aa13□□□□□ -0.33
CHRNA1-202ENST00000348749 OFD1O75665 1012 aa13□□□□□ -0.33
CHRNA1-202ENST00000348749 CCDC27Q2M243 656 aa13□□□□□ -0.33
CHRNA1-202ENST00000348749 SKOR2Q2VWA4 1001 aaPredicted RBP13□□□□□ -0.33
CHRNA1-202ENST00000348749 WWC1Q8IX03 1113 aa13□□□□□ -0.33
CHRNA1-202ENST00000348749 CCDC146Q8IYE0 955 aa13□□□□□ -0.33
CHRNA1-202ENST00000348749 PHF23Q9BUL5 403 aaPredicted RBP13□□□□□ -0.33
CHRNA1-202ENST00000348749 PDZRN3Q9UPQ7 1066 aa13□□□□□ -0.33
CHRNA1-202ENST00000348749 COG6Q9Y2V7 657 aa13□□□□□ -0.33
CHRNA1-202ENST00000348749 ADGRL1O94910 1474 aa13□□□□□ -0.33
CHRNA1-202ENST00000348749 PDZRN4Q6ZMN7 1036 aaPredicted RBP13□□□□□ -0.33
CHRNA1-202ENST00000348749 PUS7Q96PZ0 661 aaKnown RBP13□□□□□ -0.33
CHRNA1-202ENST00000348749 ERCC6L2Q5T890 1561 aa12.99□□□□□ -0.33
CHRNA1-202ENST00000348749 ZSCAN30Q86W11 494 aa12.99□□□□□ -0.33
CHRNA1-202ENST00000348749 C22orf23Q9BZE7 217 aa12.99□□□□□ -0.33
CHRNA1-202ENST00000348749 CIZ1Q9ULV3 898 aaPredicted RBP12.99□□□□□ -0.33
CHRNA1-202ENST00000348749 GAS2L3Q86XJ1 694 aa12.98□□□□□ -0.33
CHRNA1-202ENST00000348749 SPRYD3Q8NCJ5 442 aa12.98□□□□□ -0.33
CHRNA1-202ENST00000348749 PANK1Q8TE04 598 aa12.98□□□□□ -0.33
CHRNA1-202ENST00000348749 RUNDC1Q96C34 613 aa12.98□□□□□ -0.33
CHRNA1-202ENST00000348749 CT47B1P0C2W7 299 aaPredicted RBP12.98□□□□□ -0.33
CHRNA1-202ENST00000348749 HSCBQ8IWL3 235 aa12.98□□□□□ -0.33
CHRNA1-202ENST00000348749 CARD14Q9BXL6 1004 aa12.98□□□□□ -0.33
CHRNA1-202ENST00000348749 ADGRB3O60242 1522 aa12.98□□□□□ -0.33
CHRNA1-202ENST00000348749 CANXP27824 592 aaKnown RBP12.97□□□□□ -0.33
CHRNA1-202ENST00000348749 NSD2O96028 1365 aa12.97□□□□□ -0.33
CHRNA1-202ENST00000348749 RIPK4P57078 832 aa12.96□□□□□ -0.33
CHRNA1-202ENST00000348749 GBP4Q96PP9 640 aa12.96□□□□□ -0.33
CHRNA1-202ENST00000348749 RWDD1Q9H446 243 aaPredicted RBP12.96□□□□□ -0.33
CHRNA1-202ENST00000348749 PCDHB15Q9Y5E8 787 aa12.96□□□□□ -0.33
CHRNA1-202ENST00000348749 IBTKQ9P2D0 1353 aaPredicted RBP12.96□□□□□ -0.33
CHRNA1-202ENST00000348749 SNX21Q969T3 373 aa12.96□□□□□ -0.34
CHRNA1-202ENST00000348749 RARSP54136 660 aaKnown RBP12.95□□□□□ -0.34
CHRNA1-202ENST00000348749 SMC5Q8IY18 1101 aa12.95□□□□□ -0.34
CHRNA1-202ENST00000348749 MROH2AA6NES4 1674 aa12.95□□□□□ -0.34
CHRNA1-202ENST00000348749 QRICH2Q9H0J4 1663 aa12.95□□□□□ -0.34
CHRNA1-202ENST00000348749 CFAP70Q5T0N1 1121 aa12.94□□□□□ -0.34
CHRNA1-202ENST00000348749 PPLO60437 1756 aa12.94□□□□□ -0.34
CHRNA1-202ENST00000348749 ZNF518AQ6AHZ1 1483 aa12.94□□□□□ -0.34
CHRNA1-202ENST00000348749 RAB3GAP1Q15042 981 aa12.94□□□□□ -0.34
CHRNA1-202ENST00000348749 HS1BP3Q53T59 392 aa12.94□□□□□ -0.34
CHRNA1-202ENST00000348749 MTERF4Q7Z6M4 381 aaKnown RBP12.94□□□□□ -0.34
CHRNA1-202ENST00000348749 SMAP1Q8IYB5 467 aaPredicted RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms