RNA–Protein interactions for RNA: ENST00000347968.7

MBD1-204, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-204ENST00000347968 NBPF1Q3BBV0 1214 aa20.34■□□□□ 0.85
MBD1-204ENST00000347968 ISY1Q9ULR0 285 aaKnown RBP20.34■□□□□ 0.85
MBD1-204ENST00000347968 HSP90AB1P08238 724 aaKnown RBP20.34■□□□□ 0.85
MBD1-204ENST00000347968 DDX49Q9Y6V7 483 aaKnown RBP20.33■□□□□ 0.85
MBD1-204ENST00000347968 CCDC141Q6ZP82 1450 aa20.32■□□□□ 0.84
MBD1-204ENST00000347968 VIRMAQ69YN4 1812 aaKnown RBP20.32■□□□□ 0.84
MBD1-204ENST00000347968 RLBP1P12271 317 aa20.32■□□□□ 0.84
MBD1-204ENST00000347968 SSFA2P28290 1259 aa20.32■□□□□ 0.84
MBD1-204ENST00000347968 GBP4Q96PP9 640 aa20.32■□□□□ 0.84
MBD1-204ENST00000347968 NEUROD2Q15784 382 aa20.31■□□□□ 0.84
MBD1-204ENST00000347968 RGL3Q3MIN7 710 aa20.31■□□□□ 0.84
MBD1-204ENST00000347968 CCDC94Q9BW85 323 aaPredicted RBP20.3■□□□□ 0.84
MBD1-204ENST00000347968 ZNF521Q96K83 1311 aa20.3■□□□□ 0.84
MBD1-204ENST00000347968 UHRF1BP1LA0JNW5 1464 aa20.3■□□□□ 0.84
MBD1-204ENST00000347968 CGNL1Q0VF96 1302 aa20.3■□□□□ 0.84
MBD1-204ENST00000347968 SPDYE4A6NLX3 237 aa20.3■□□□□ 0.84
MBD1-204ENST00000347968 ARHGEF12Q9NZN5 1544 aa20.29■□□□□ 0.84
MBD1-204ENST00000347968 CAVIN1Q6NZI2 390 aaKnown RBP20.29■□□□□ 0.84
MBD1-204ENST00000347968 DYNC1I1O14576 645 aa20.28■□□□□ 0.84
MBD1-204ENST00000347968 SHANK2Q9UPX8 1470 aa20.28■□□□□ 0.84
MBD1-204ENST00000347968 CD2BP2O95400 341 aaKnown RBP20.28■□□□□ 0.84
MBD1-204ENST00000347968 EFCAB2Q5VUJ9 269 aa20.28■□□□□ 0.84
MBD1-204ENST00000347968 AFAP1Q8N556 730 aa20.28■□□□□ 0.84
MBD1-204ENST00000347968 DNTTIP2Q5QJE6 756 aaKnown RBP20.27■□□□□ 0.84
MBD1-204ENST00000347968 RBSNQ9H1K0 784 aa20.27■□□□□ 0.84
MBD1-204ENST00000347968 MYO5CQ9NQX4 1742 aa20.27■□□□□ 0.84
MBD1-204ENST00000347968 TNNT2P45379 298 aaPredicted RBP20.27■□□□□ 0.84
MBD1-204ENST00000347968 TERF1P54274 439 aa20.26■□□□□ 0.83
MBD1-204ENST00000347968 TMEM51Q9NW97 253 aa20.26■□□□□ 0.83
MBD1-204ENST00000347968 NOL7Q9UMY1 257 aaKnown RBP20.26■□□□□ 0.83
MBD1-204ENST00000347968 DISP3Q9P2K9 1392 aa20.26■□□□□ 0.83
MBD1-204ENST00000347968 PLCH2O75038 1416 aa20.26■□□□□ 0.83
MBD1-204ENST00000347968 PPP2R1AP30153 589 aa20.26■□□□□ 0.83
MBD1-204ENST00000347968 RTEL1-TNFRSF6BF6WH68 1400 aa20.26■□□□□ 0.83
MBD1-204ENST00000347968 ATP2B3Q16720 1220 aa20.25■□□□□ 0.83
MBD1-204ENST00000347968 ARHGEF5Q12774 1597 aa20.25■□□□□ 0.83
MBD1-204ENST00000347968 UTP14CQ5TAP6 766 aaKnown RBP20.25■□□□□ 0.83
MBD1-204ENST00000347968 RBM42Q9BTD8 480 aaKnown RBP20.25■□□□□ 0.83
MBD1-204ENST00000347968 RALGAPBQ86X10 1494 aa20.24■□□□□ 0.83
MBD1-204ENST00000347968 ZNF830Q96NB3 372 aaPredicted RBP20.24■□□□□ 0.83
MBD1-204ENST00000347968 PLEKHH2Q8IVE3 1493 aa20.24■□□□□ 0.83
MBD1-204ENST00000347968 RAB3GAP1Q15042 981 aa20.24■□□□□ 0.83
MBD1-204ENST00000347968 RBM27Q9P2N5 1060 aaKnown RBP20.23■□□□□ 0.83
MBD1-204ENST00000347968 KIAA1107Q9UPP5 1409 aa20.23■□□□□ 0.83
MBD1-204ENST00000347968 TRAPPC8Q9Y2L5 1435 aa20.23■□□□□ 0.83
MBD1-204ENST00000347968 RNF214Q8ND24 703 aa20.23■□□□□ 0.83
MBD1-204ENST00000347968 CHAMP1Q96JM3 812 aa20.23■□□□□ 0.83
MBD1-204ENST00000347968 DDIT3P35638 169 aa20.23■□□□□ 0.83
MBD1-204ENST00000347968 SKOR2Q2VWA4 1001 aaPredicted RBP20.23■□□□□ 0.83
MBD1-204ENST00000347968 SASS6Q6UVJ0 657 aa20.23■□□□□ 0.83
MBD1-204ENST00000347968 PAXIP1Q6ZW49 1069 aaPredicted RBP20.23■□□□□ 0.83
MBD1-204ENST00000347968 ZNF500O60304 480 aaPredicted RBP20.22■□□□□ 0.83
MBD1-204ENST00000347968 CGNQ9P2M7 1197 aaKnown RBP20.22■□□□□ 0.83
MBD1-204ENST00000347968 RRP7AQ9Y3A4 280 aaKnown RBP20.22■□□□□ 0.83
MBD1-204ENST00000347968 NKTRP30414 1462 aaKnown RBP20.22■□□□□ 0.83
MBD1-204ENST00000347968 PRIM1P49642 420 aaKnown RBP20.21■□□□□ 0.83
MBD1-204ENST00000347968 MCTP1Q6DN14 999 aa20.21■□□□□ 0.83
MBD1-204ENST00000347968 PMFBP1Q8TBY8 1022 aa20.21■□□□□ 0.83
MBD1-204ENST00000347968 WDR7Q9Y4E6 1490 aa20.21■□□□□ 0.83
MBD1-204ENST00000347968 RSPH4AQ5TD94 716 aa20.21■□□□□ 0.83
MBD1-204ENST00000347968 ZKSCAN5Q9Y2L8 839 aa20.21■□□□□ 0.83
MBD1-204ENST00000347968 PDE3AQ14432 1141 aa20.21■□□□□ 0.83
MBD1-204ENST00000347968 MTERF4Q7Z6M4 381 aaKnown RBP20.21■□□□□ 0.83
MBD1-204ENST00000347968 ZNF710Q8N1W2 664 aa20.21■□□□□ 0.83
MBD1-204ENST00000347968 ASXL2Q76L83 1435 aa20.2■□□□□ 0.82
MBD1-204ENST00000347968 NPM1P06748 294 aaKnown RBP eCLIP20.19■□□□□ 0.82
MBD1-204ENST00000347968 C17orf53Q8N3J3 647 aaPredicted RBP20.19■□□□□ 0.82
MBD1-204ENST00000347968 TRMT2AQ8IZ69 625 aaKnown RBP20.18■□□□□ 0.82
MBD1-204ENST00000347968 ZSCAN23Q3MJ62 389 aa20.18■□□□□ 0.82
MBD1-204ENST00000347968 E9PCH4 1651 aa20.17■□□□□ 0.82
MBD1-204ENST00000347968 PTMAP06454 111 aaKnown RBP20.16■□□□□ 0.82
MBD1-204ENST00000347968 GAS2L2Q8NHY3 880 aa20.16■□□□□ 0.82
MBD1-204ENST00000347968 E9PSI1 815 aa20.16■□□□□ 0.82
MBD1-204ENST00000347968 GOLGA6L22H0YM25 854 aa20.16■□□□□ 0.82
MBD1-204ENST00000347968 KNSTRNQ9Y448 316 aa20.16■□□□□ 0.82
MBD1-204ENST00000347968 BAG4O95429 457 aaKnown RBP20.16■□□□□ 0.82
MBD1-204ENST00000347968 SMC5Q8IY18 1101 aa20.16■□□□□ 0.82
MBD1-204ENST00000347968 RWDD1Q9H446 243 aaPredicted RBP20.16■□□□□ 0.82
MBD1-204ENST00000347968 SPAG9O60271 1321 aaKnown RBP20.15■□□□□ 0.82
MBD1-204ENST00000347968 KLHL40Q2TBA0 621 aa20.14■□□□□ 0.82
MBD1-204ENST00000347968 FOXD4L5Q5VV16 416 aaPredicted RBP20.13■□□□□ 0.81
MBD1-204ENST00000347968 FOXD4L4Q8WXT5 416 aaPredicted RBP20.13■□□□□ 0.81
MBD1-204ENST00000347968 PKP1Q13835 747 aa20.13■□□□□ 0.81
MBD1-204ENST00000347968 CSPP1Q1MSJ5 1256 aa20.13■□□□□ 0.81
MBD1-204ENST00000347968 CYB5RLQ6IPT4 315 aa20.13■□□□□ 0.81
MBD1-204ENST00000347968 AK9Q5TCS8 1911 aa20.12■□□□□ 0.81
MBD1-204ENST00000347968 ABCC1P33527 1531 aa20.12■□□□□ 0.81
MBD1-204ENST00000347968 TESK2Q96S53 571 aa20.12■□□□□ 0.81
MBD1-204ENST00000347968 FANCAO15360 1455 aa20.12■□□□□ 0.81
MBD1-204ENST00000347968 UHRF1BP1Q6BDS2 1440 aa20.11■□□□□ 0.81
MBD1-204ENST00000347968 IPO4Q8TEX9 1081 aaKnown RBP20.11■□□□□ 0.81
MBD1-204ENST00000347968 CHMP4AQ9BY43 222 aa20.11■□□□□ 0.81
MBD1-204ENST00000347968 FAM135AQ9P2D6 1515 aa20.11■□□□□ 0.81
MBD1-204ENST00000347968 PDLIM2Q96JY6 352 aa20.11■□□□□ 0.81
MBD1-204ENST00000347968 SYCE3A1L190 88 aa20.1■□□□□ 0.81
MBD1-204ENST00000347968 NCOA3Q9Y6Q9 1424 aa20.1■□□□□ 0.81
MBD1-204ENST00000347968 TPRNQ4KMQ1 711 aa20.1■□□□□ 0.81
MBD1-204ENST00000347968 KIF20AO95235 890 aa20.09■□□□□ 0.81
MBD1-204ENST00000347968 U2AF2P26368 475 aaKnown RBP eCLIP20.09■□□□□ 0.813e-7■■□□□ 12.2
MBD1-204ENST00000347968 RARSP54136 660 aaKnown RBP20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms