RNA–Protein interactions for RNA: ENST00000347048.8

PTPA-202, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 1 (best) BASIC

Gene PTPA, Length 1,989 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-202ENST00000347048 SPINK5Q9NQ38 1064 aaPredicted RBP31.48■■■□□ 2.63
PTPA-202ENST00000347048 SHPRHQ149N8 1683 aa31.47■■■□□ 2.63
PTPA-202ENST00000347048 USP35Q9P2H5 1018 aa31.47■■■□□ 2.63
PTPA-202ENST00000347048 PUS7Q96PZ0 661 aaKnown RBP31.46■■■□□ 2.63
PTPA-202ENST00000347048 ABCC3O15438 1527 aa31.45■■■□□ 2.63
PTPA-202ENST00000347048 PPM1GO15355 546 aaPredicted RBP31.45■■■□□ 2.62
PTPA-202ENST00000347048 FAM161AQ3B820 660 aa31.45■■■□□ 2.62
PTPA-202ENST00000347048 CHGAP10645 457 aaKnown RBP31.43■■■□□ 2.62
PTPA-202ENST00000347048 PDE3AQ14432 1141 aa31.43■■■□□ 2.62
PTPA-202ENST00000347048 MORC1Q86VD1 984 aa31.43■■■□□ 2.62
PTPA-202ENST00000347048 SKAP1Q86WV1 359 aa31.42■■■□□ 2.62
PTPA-202ENST00000347048 CGNL1Q0VF96 1302 aa31.41■■■□□ 2.62
PTPA-202ENST00000347048 TRAK1Q9UPV9 953 aa31.41■■■□□ 2.62
PTPA-202ENST00000347048 CAMSAP1Q5T5Y3 1602 aa31.4■■■□□ 2.62
PTPA-202ENST00000347048 WWC1Q8IX03 1113 aa31.4■■■□□ 2.62
PTPA-202ENST00000347048 PIK3C2BO00750 1634 aa31.38■■■□□ 2.61
PTPA-202ENST00000347048 IQSEC2Q5JU85 1478 aa31.38■■■□□ 2.61
PTPA-202ENST00000347048 BCAR3O75815 825 aa31.38■■■□□ 2.61
PTPA-202ENST00000347048 RUNDC1Q96C34 613 aa31.37■■■□□ 2.61
PTPA-202ENST00000347048 NSD2O96028 1365 aa31.37■■■□□ 2.61
PTPA-202ENST00000347048 NCBP3Q53F19 620 aaKnown RBP31.36■■■□□ 2.61
PTPA-202ENST00000347048 C8orf34Q49A92 452 aa31.35■■■□□ 2.61
PTPA-202ENST00000347048 GGT6Q6P531 493 aa31.34■■■□□ 2.61
PTPA-202ENST00000347048 SLC12A5Q9H2X9 1139 aa31.34■■■□□ 2.61
PTPA-202ENST00000347048 DMRT2Q9Y5R5 561 aa31.34■■■□□ 2.61
PTPA-202ENST00000347048 NEO1Q92859 1461 aa31.33■■■□□ 2.61
PTPA-202ENST00000347048 ARHGEF28Q8N1W1 1705 aaKnown RBP31.33■■■□□ 2.61
PTPA-202ENST00000347048 AAMPQ13685 434 aa31.32■■■□□ 2.6
PTPA-202ENST00000347048 PHF23Q9BUL5 403 aaPredicted RBP31.32■■■□□ 2.6
PTPA-202ENST00000347048 CFAP53Q96M91 514 aa31.32■■■□□ 2.6
PTPA-202ENST00000347048 CFAP65Q6ZU64 1925 aaKnown RBP31.31■■■□□ 2.6
PTPA-202ENST00000347048 WDR63Q8IWG1 891 aa31.31■■■□□ 2.6
PTPA-202ENST00000347048 EVC2Q86UK5 1308 aa31.31■■■□□ 2.6
PTPA-202ENST00000347048 NEXMIFQ5QGS0 1516 aa31.3■■■□□ 2.6
PTPA-202ENST00000347048 VGFO15240 615 aaPredicted RBP31.3■■■□□ 2.6
PTPA-202ENST00000347048 CCDC27Q2M243 656 aa31.3■■■□□ 2.6
PTPA-202ENST00000347048 ANKRD36BQ8N2N9 1353 aa31.3■■■□□ 2.6
PTPA-202ENST00000347048 LAS1LQ9Y4W2 734 aaKnown RBP31.29■■■□□ 2.6
PTPA-202ENST00000347048 ARHGAP31Q2M1Z3 1444 aa31.29■■■□□ 2.6
PTPA-202ENST00000347048 SIGLEC1Q9BZZ2 1709 aa31.29■■■□□ 2.6
PTPA-202ENST00000347048 NEFMP07197 916 aa31.28■■■□□ 2.6
PTPA-202ENST00000347048 TULP4Q9NRJ4 1543 aa31.27■■■□□ 2.6
PTPA-202ENST00000347048 RAPGEF3O95398 923 aa31.27■■■□□ 2.6
PTPA-202ENST00000347048 TMEM132EQ6IEE7 984 aa31.27■■■□□ 2.6
PTPA-202ENST00000347048 VIRMAQ69YN4 1812 aaKnown RBP31.26■■■□□ 2.59
PTPA-202ENST00000347048 CANXP27824 592 aaKnown RBP31.25■■■□□ 2.59
PTPA-202ENST00000347048 CLUAP1Q96AJ1 413 aa31.25■■■□□ 2.59
PTPA-202ENST00000347048 ZFYVE9O95405 1425 aa31.25■■■□□ 2.59
PTPA-202ENST00000347048 TCP11L2Q8N4U5 519 aa31.25■■■□□ 2.59
PTPA-202ENST00000347048 DIP2CQ9Y2E4 1556 aa31.23■■■□□ 2.59
PTPA-202ENST00000347048 RGS3P49796 1198 aa31.23■■■□□ 2.59
PTPA-202ENST00000347048 DAXXQ9UER7 740 aaPredicted RBP31.23■■■□□ 2.59
PTPA-202ENST00000347048 MAPK8IP3Q9UPT6 1336 aa31.22■■■□□ 2.59
PTPA-202ENST00000347048 MTHFSP49914 203 aa31.22■■■□□ 2.59
PTPA-202ENST00000347048 RARSP54136 660 aaKnown RBP31.2■■■□□ 2.59
PTPA-202ENST00000347048 TNNT2P45379 298 aaPredicted RBP31.19■■■□□ 2.58
PTPA-202ENST00000347048 ADGRB2O60241 1585 aa31.19■■■□□ 2.58
PTPA-202ENST00000347048 IGHDP01880 384 aa31.19■■■□□ 2.58
PTPA-202ENST00000347048 PMFBP1Q8TBY8 1022 aa31.16■■■□□ 2.58
PTPA-202ENST00000347048 COG6Q9Y2V7 657 aa31.16■■■□□ 2.58
PTPA-202ENST00000347048 ZMYM3Q14202 1370 aa31.15■■■□□ 2.58
PTPA-202ENST00000347048 PANK1Q8TE04 598 aa31.15■■■□□ 2.58
PTPA-202ENST00000347048 MYH16Q9H6N6 1097 aa31.15■■■□□ 2.58
PTPA-202ENST00000347048 NEUROD2Q15784 382 aa31.14■■■□□ 2.57
PTPA-202ENST00000347048 SLC52A1Q9NWF4 448 aa31.14■■■□□ 2.57
PTPA-202ENST00000347048 RRP7AQ9Y3A4 280 aaKnown RBP31.14■■■□□ 2.57
PTPA-202ENST00000347048 ABCC11Q96J66 1382 aa31.12■■■□□ 2.57
PTPA-202ENST00000347048 RICTORQ6R327 1708 aa31.11■■■□□ 2.57
PTPA-202ENST00000347048 CT47B1P0C2W7 299 aaPredicted RBP31.1■■■□□ 2.57
PTPA-202ENST00000347048 FRAT1Q92837 279 aaPredicted RBP31.1■■■□□ 2.57
PTPA-202ENST00000347048 MED14O60244 1454 aa31.07■■■□□ 2.56
PTPA-202ENST00000347048 ANKRD26Q9UPS8 1709 aa31.07■■■□□ 2.56
PTPA-202ENST00000347048 CLTCQ00610 1675 aaKnown RBP31.07■■■□□ 2.56
PTPA-202ENST00000347048 ATAD2Q6PL18 1390 aa31.06■■■□□ 2.56
PTPA-202ENST00000347048 U2AF1L5P0DN76 240 aaPredicted RBP31.06■■■□□ 2.56
PTPA-202ENST00000347048 U2AF1Q01081 240 aaKnown RBP eCLIP31.06■■■□□ 2.56
PTPA-202ENST00000347048 CABP2Q9NPB3 220 aa31.06■■■□□ 2.56
PTPA-202ENST00000347048 IDI1Q13907 227 aa31.05■■■□□ 2.56
PTPA-202ENST00000347048 A0A1W2PP64 1363 aa31.04■■■□□ 2.56
PTPA-202ENST00000347048 TMEM131LA2VDJ0 1609 aa31.04■■■□□ 2.56
PTPA-202ENST00000347048 PREX1Q8TCU6 1659 aa31.04■■■□□ 2.56
PTPA-202ENST00000347048 NFKBIBQ15653 356 aa31.03■■■□□ 2.56
PTPA-202ENST00000347048 PTPRMP28827 1452 aa31.02■■■□□ 2.56
PTPA-202ENST00000347048 NUTM2DQ5VT03 806 aaPredicted RBP31.02■■■□□ 2.56
PTPA-202ENST00000347048 COL3A1P02461 1466 aaPredicted RBP31.02■■■□□ 2.56
PTPA-202ENST00000347048 SLC4A3P48751 1232 aa31.01■■■□□ 2.55
PTPA-202ENST00000347048 MYO5BQ9ULV0 1848 aa30.99■■■□□ 2.55
PTPA-202ENST00000347048 RLBP1P12271 317 aa30.99■■■□□ 2.55
PTPA-202ENST00000347048 RWDD1Q9H446 243 aaPredicted RBP30.99■■■□□ 2.55
PTPA-202ENST00000347048 TERF2IPQ9NYB0 399 aa30.99■■■□□ 2.55
PTPA-202ENST00000347048 USP19O94966 1318 aa30.98■■■□□ 2.55
PTPA-202ENST00000347048 YEATS2Q9ULM3 1422 aa30.98■■■□□ 2.55
PTPA-202ENST00000347048 SRPK2P78362 688 aaKnown RBP30.97■■■□□ 2.55
PTPA-202ENST00000347048 PCDHB15Q9Y5E8 787 aa30.97■■■□□ 2.55
PTPA-202ENST00000347048 ZKSCAN2Q63HK3 967 aa30.96■■■□□ 2.55
PTPA-202ENST00000347048 PLEKHF1Q96S99 279 aa30.96■■■□□ 2.55
PTPA-202ENST00000347048 IL16Q14005 1332 aa30.95■■■□□ 2.55
PTPA-202ENST00000347048 MVPQ14764 893 aaKnown RBP30.95■■■□□ 2.54
PTPA-202ENST00000347048 YTHDC2Q9H6S0 1430 aaKnown RBP30.95■■■□□ 2.54
PTPA-202ENST00000347048 NLRP1Q9C000 1473 aa30.93■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms