RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 ROCK1Q13464 1354 aa14.55□□□□□ -0.08
COL12A1-202ENST00000345356 CCP110O43303 1012 aa14.55□□□□□ -0.08
COL12A1-202ENST00000345356 SDF4Q9BRK5 362 aa14.55□□□□□ -0.08
COL12A1-202ENST00000345356 PCMTD1Q96MG8 357 aaPredicted RBP14.55□□□□□ -0.08
COL12A1-202ENST00000345356 TRAK1Q9UPV9 953 aa14.54□□□□□ -0.08
COL12A1-202ENST00000345356 PPP4R3BQ5MIZ7 849 aa14.54□□□□□ -0.08
COL12A1-202ENST00000345356 RNF20Q5VTR2 975 aa14.54□□□□□ -0.08
COL12A1-202ENST00000345356 TOMM22Q9NS69 142 aa14.54□□□□□ -0.08
COL12A1-202ENST00000345356 HOOK1Q9UJC3 728 aaKnown RBP14.54□□□□□ -0.08
COL12A1-202ENST00000345356 DYNC1I1O14576 645 aa14.54□□□□□ -0.08
COL12A1-202ENST00000345356 CDR1P51861 262 aa14.54□□□□□ -0.08
COL12A1-202ENST00000345356 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.54□□□□□ -0.08
COL12A1-202ENST00000345356 CALCOCO1Q9P1Z2 691 aa14.54□□□□□ -0.08
COL12A1-202ENST00000345356 TRERF1Q96PN7 1200 aa14.53□□□□□ -0.08
COL12A1-202ENST00000345356 CEP89Q96ST8 783 aa14.53□□□□□ -0.08
COL12A1-202ENST00000345356 NACADO15069 1562 aa14.53□□□□□ -0.08
COL12A1-202ENST00000345356 AXDND1Q5T1B0 1012 aaPredicted RBP14.53□□□□□ -0.08
COL12A1-202ENST00000345356 CCDC191Q8NCU4 936 aa14.53□□□□□ -0.08
COL12A1-202ENST00000345356 HNRNPMP52272 730 aaKnown RBP eCLIP14.53□□□□□ -0.08
COL12A1-202ENST00000345356 WDR97A6NE52 1622 aa14.52□□□□□ -0.08
COL12A1-202ENST00000345356 CCDC9Q9Y3X0 531 aaKnown RBP14.52□□□□□ -0.09
COL12A1-202ENST00000345356 WIZO95785 1651 aa14.52□□□□□ -0.09
COL12A1-202ENST00000345356 TTLL5Q6EMB2 1281 aa14.52□□□□□ -0.09
COL12A1-202ENST00000345356 FMNL2Q96PY5 1086 aa14.51□□□□□ -0.09
COL12A1-202ENST00000345356 TBC1D2Q9BYX2 928 aa14.51□□□□□ -0.09
COL12A1-202ENST00000345356 CPLX1O14810 134 aa14.51□□□□□ -0.09
COL12A1-202ENST00000345356 SPDYE4A6NLX3 237 aa14.51□□□□□ -0.09
COL12A1-202ENST00000345356 XRCC6P12956 609 aaKnown RBP eCLIP14.51□□□□□ -0.09
COL12A1-202ENST00000345356 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.51□□□□□ -0.09
COL12A1-202ENST00000345356 RRP12Q5JTH9 1297 aaKnown RBP14.51□□□□□ -0.09
COL12A1-202ENST00000345356 CAGE1Q8TC20 777 aa14.51□□□□□ -0.09
COL12A1-202ENST00000345356 CPLX2Q6PUV4 134 aaKnown RBP14.5□□□□□ -0.09
COL12A1-202ENST00000345356 KINO60870 393 aaKnown RBP14.5□□□□□ -0.09
COL12A1-202ENST00000345356 TRIM29Q14134 588 aa14.5□□□□□ -0.09
COL12A1-202ENST00000345356 WDR33Q9C0J8 1336 aaKnown RBP14.5□□□□□ -0.09
COL12A1-202ENST00000345356 GGT6Q6P531 493 aa14.5□□□□□ -0.09
COL12A1-202ENST00000345356 OLFM4Q6UX06 510 aa14.5□□□□□ -0.09
COL12A1-202ENST00000345356 KIF21BO75037 1637 aa14.5□□□□□ -0.09
COL12A1-202ENST00000345356 USP8P40818 1118 aa14.5□□□□□ -0.09
COL12A1-202ENST00000345356 IFIT2P09913 472 aaKnown RBP14.49□□□□□ -0.09
COL12A1-202ENST00000345356 DCTN1Q14203 1278 aa14.49□□□□□ -0.09
COL12A1-202ENST00000345356 GCC1Q96CN9 775 aa14.49□□□□□ -0.09
COL12A1-202ENST00000345356 TNMDQ9H2S6 317 aa14.49□□□□□ -0.09
COL12A1-202ENST00000345356 KIAA0754O94854 1291 aa14.49□□□□□ -0.09
COL12A1-202ENST00000345356 PANK2Q9BZ23 570 aa14.49□□□□□ -0.09
COL12A1-202ENST00000345356 EIF3JO75822 258 aaKnown RBP14.48□□□□□ -0.09
COL12A1-202ENST00000345356 PPP2R1AP30153 589 aa14.48□□□□□ -0.09
COL12A1-202ENST00000345356 SYNE3Q6ZMZ3 975 aa14.48□□□□□ -0.09
COL12A1-202ENST00000345356 TNPO1Q92973 898 aaKnown RBP14.48□□□□□ -0.09
COL12A1-202ENST00000345356 RRBP1Q9P2E9 1410 aaKnown RBP14.48□□□□□ -0.09
COL12A1-202ENST00000345356 NINLQ9Y2I6 1382 aa14.48□□□□□ -0.09
COL12A1-202ENST00000345356 MIA2Q96PC5 1412 aa14.48□□□□□ -0.09
COL12A1-202ENST00000345356 TCP11L2Q8N4U5 519 aa14.48□□□□□ -0.09
COL12A1-202ENST00000345356 DIAPH1O60610 1272 aaKnown RBP14.48□□□□□ -0.09
COL12A1-202ENST00000345356 FGD6Q6ZV73 1430 aa14.47□□□□□ -0.09
COL12A1-202ENST00000345356 TOP2AP11388 1531 aaKnown RBP14.47□□□□□ -0.09
COL12A1-202ENST00000345356 C1orf115Q9H7X2 142 aa14.47□□□□□ -0.09
COL12A1-202ENST00000345356 MCM5P33992 734 aa14.47□□□□□ -0.09
COL12A1-202ENST00000345356 CT47B1P0C2W7 299 aaPredicted RBP14.47□□□□□ -0.09
COL12A1-202ENST00000345356 ZNF330Q9Y3S2 320 aaPredicted RBP14.47□□□□□ -0.09
COL12A1-202ENST00000345356 AKAP17AQ02040 695 aaKnown RBP14.46□□□□□ -0.09
COL12A1-202ENST00000345356 NCBP3Q53F19 620 aaKnown RBP14.46□□□□□ -0.09
COL12A1-202ENST00000345356 ERLIN1O75477 346 aa14.46□□□□□ -0.09
COL12A1-202ENST00000345356 TMCO3Q6UWJ1 677 aa14.46□□□□□ -0.09
COL12A1-202ENST00000345356 PDCP20941 246 aa14.46□□□□□ -0.09
COL12A1-202ENST00000345356 C20orf194Q5TEA3 1177 aa14.46□□□□□ -0.09
COL12A1-202ENST00000345356 NAP1L1P55209 391 aaKnown RBP14.46□□□□□ -0.09
COL12A1-202ENST00000345356 UBXN4Q92575 508 aa14.46□□□□□ -0.09
COL12A1-202ENST00000345356 FAM177A1Q8N128 213 aaPredicted RBP14.46□□□□□ -0.1
COL12A1-202ENST00000345356 PLCD4Q9BRC7 762 aa14.45□□□□□ -0.1
COL12A1-202ENST00000345356 NUTM2DQ5VT03 806 aaPredicted RBP14.45□□□□□ -0.1
COL12A1-202ENST00000345356 FILIP1Q7Z7B0 1213 aa14.45□□□□□ -0.1
COL12A1-202ENST00000345356 SSFA2P28290 1259 aa14.44□□□□□ -0.1
COL12A1-202ENST00000345356 GNAI1P63096 354 aa14.44□□□□□ -0.1
COL12A1-202ENST00000345356 EXOSC9Q06265 439 aaKnown RBP14.44□□□□□ -0.1
COL12A1-202ENST00000345356 MVPQ14764 893 aaKnown RBP14.44□□□□□ -0.1
COL12A1-202ENST00000345356 ERC2O15083 957 aa14.44□□□□□ -0.1
COL12A1-202ENST00000345356 DHX8Q14562 1220 aaKnown RBP14.44□□□□□ -0.1
COL12A1-202ENST00000345356 CHD1LQ86WJ1 897 aa14.44□□□□□ -0.1
COL12A1-202ENST00000345356 TIGD1Q96MW7 591 aa14.44□□□□□ -0.1
COL12A1-202ENST00000345356 GTF2F1P35269 517 aaKnown RBP eCLIP14.44□□□□□ -0.1
COL12A1-202ENST00000345356 NOB1Q9ULX3 412 aaKnown RBP14.43□□□□□ -0.1
COL12A1-202ENST00000345356 PSMA5P28066 241 aa14.43□□□□□ -0.1
COL12A1-202ENST00000345356 FKBP5Q13451 457 aaPredicted RBP14.43□□□□□ -0.1
COL12A1-202ENST00000345356 CEBPZQ03701 1054 aaKnown RBP14.43□□□□□ -0.1
COL12A1-202ENST00000345356 PTPN14Q15678 1187 aa14.43□□□□□ -0.1
COL12A1-202ENST00000345356 CCDC102AQ96A19 550 aa14.43□□□□□ -0.1
COL12A1-202ENST00000345356 NBPF8Q3BBV2 869 aa14.43□□□□□ -0.1
COL12A1-202ENST00000345356 GPATCH11Q8N954 259 aa14.43□□□□□ -0.1
COL12A1-202ENST00000345356 PRIMPOLQ96LW4 560 aa14.43□□□□□ -0.1
COL12A1-202ENST00000345356 NECTIN2Q92692 538 aa14.42□□□□□ -0.1
COL12A1-202ENST00000345356 WASHC2CQ9Y4E1 1318 aa14.42□□□□□ -0.1
COL12A1-202ENST00000345356 KRT85P78386 507 aa14.42□□□□□ -0.1
COL12A1-202ENST00000345356 NUP62CLQ9H1M0 184 aa14.42□□□□□ -0.1
COL12A1-202ENST00000345356 C9orf78Q9NZ63 289 aaPredicted RBP14.42□□□□□ -0.1
COL12A1-202ENST00000345356 USP25Q9UHP3 1055 aa14.42□□□□□ -0.1
COL12A1-202ENST00000345356 KIF3BO15066 747 aa14.42□□□□□ -0.1
COL12A1-202ENST00000345356 POLR3GO15318 223 aaPredicted RBP14.42□□□□□ -0.1
COL12A1-202ENST00000345356 SERPINC1P01008 464 aa14.42□□□□□ -0.1
COL12A1-202ENST00000345356 NBPF1Q3BBV0 1214 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms