RNA–Protein interactions for RNA: ENST00000344951.8

CUL3-202, Transcript of cullin 3, humanhuman

TSL 2 BASIC

Gene CUL3, Length 6,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-202ENST00000344951 TEX35Q5T0J7 233 aa18.2■□□□□ 0.5
CUL3-202ENST00000344951 PSME1Q06323 249 aa18.19■□□□□ 0.5
CUL3-202ENST00000344951 CCDC97Q96F63 343 aaPredicted RBP18.19■□□□□ 0.5
CUL3-202ENST00000344951 ATP6V1DQ9Y5K8 247 aa18.19■□□□□ 0.5
CUL3-202ENST00000344951 SASS6Q6UVJ0 657 aa18.19■□□□□ 0.5
CUL3-202ENST00000344951 HOOK1Q9UJC3 728 aaKnown RBP18.19■□□□□ 0.5
CUL3-202ENST00000344951 ZKSCAN1P17029 563 aaPredicted RBP18.19■□□□□ 0.5
CUL3-202ENST00000344951 EFCAB2Q5VUJ9 269 aa18.19■□□□□ 0.5
CUL3-202ENST00000344951 WWC2Q6AWC2 1192 aa18.19■□□□□ 0.5
CUL3-202ENST00000344951 CCDC144AA2RUR9 1427 aa18.18■□□□□ 0.5
CUL3-202ENST00000344951 G3BP1Q13283 466 aaKnown RBP eCLIP18.18■□□□□ 0.5
CUL3-202ENST00000344951 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.18■□□□□ 0.5
CUL3-202ENST00000344951 NEFHP12036 1026 aa18.17■□□□□ 0.5
CUL3-202ENST00000344951 BRPF3Q9ULD4 1205 aa18.17■□□□□ 0.5
CUL3-202ENST00000344951 MNS1Q8NEH6 495 aa18.17■□□□□ 0.5
CUL3-202ENST00000344951 DDX19BQ9UMR2 479 aa18.16■□□□□ 0.5
CUL3-202ENST00000344951 TOP2AP11388 1531 aaKnown RBP18.16■□□□□ 0.5
CUL3-202ENST00000344951 DZIP1LQ8IYY4 767 aaKnown RBP18.16■□□□□ 0.5
CUL3-202ENST00000344951 LRRFIP1Q32MZ4 808 aaKnown RBP18.15■□□□□ 0.5
CUL3-202ENST00000344951 RUFY2Q8WXA3 655 aa18.15■□□□□ 0.5
CUL3-202ENST00000344951 FKBP5Q13451 457 aaPredicted RBP18.15■□□□□ 0.5
CUL3-202ENST00000344951 IL27Q8NEV9 243 aa18.14■□□□□ 0.5
CUL3-202ENST00000344951 C22orf23Q9BZE7 217 aa18.14■□□□□ 0.5
CUL3-202ENST00000344951 SAFBQ15424 915 aaKnown RBP eCLIP18.14■□□□□ 0.49
CUL3-202ENST00000344951 RIC3Q7Z5B4 369 aa18.14■□□□□ 0.49
CUL3-202ENST00000344951 SMC3Q9UQE7 1217 aa18.14■□□□□ 0.49
CUL3-202ENST00000344951 CCDC7Q96M83 1385 aa18.13■□□□□ 0.49
CUL3-202ENST00000344951 REC8O95072 547 aa18.13■□□□□ 0.49
CUL3-202ENST00000344951 CHMP4BP1P59074 171 aa18.13■□□□□ 0.49
CUL3-202ENST00000344951 KIF7Q2M1P5 1343 aa18.13■□□□□ 0.49
CUL3-202ENST00000344951 ZHX3Q9H4I2 956 aa18.12■□□□□ 0.49
CUL3-202ENST00000344951 CEBPZQ03701 1054 aaKnown RBP18.12■□□□□ 0.49
CUL3-202ENST00000344951 PANK1Q8TE04 598 aa18.12■□□□□ 0.49
CUL3-202ENST00000344951 CNTLNQ9NXG0 1405 aa18.12■□□□□ 0.49
CUL3-202ENST00000344951 H0YHG0 523 aa18.11■□□□□ 0.49
CUL3-202ENST00000344951 HMOX1P09601 288 aa18.11■□□□□ 0.49
CUL3-202ENST00000344951 FMNL2Q96PY5 1086 aa18.11■□□□□ 0.49
CUL3-202ENST00000344951 CDR1P51861 262 aa18.11■□□□□ 0.49
CUL3-202ENST00000344951 RALYLQ86SE5 291 aaKnown RBP18.11■□□□□ 0.49
CUL3-202ENST00000344951 LNPKQ9C0E8 428 aa18.1■□□□□ 0.49
CUL3-202ENST00000344951 KRT18P05783 430 aaKnown RBP18.1■□□□□ 0.49
CUL3-202ENST00000344951 OLFM4Q6UX06 510 aa18.1■□□□□ 0.49
CUL3-202ENST00000344951 DNAJC2Q99543 621 aaKnown RBP18.1■□□□□ 0.49
CUL3-202ENST00000344951 CCDC173Q0VFZ6 552 aa18.09■□□□□ 0.49
CUL3-202ENST00000344951 CDK5RAP3Q96JB5 506 aa18.09■□□□□ 0.49
CUL3-202ENST00000344951 WDR70Q9NW82 654 aa18.09■□□□□ 0.49
CUL3-202ENST00000344951 MRE11P49959 708 aa18.08■□□□□ 0.49
CUL3-202ENST00000344951 RNF214Q8ND24 703 aa18.08■□□□□ 0.48
CUL3-202ENST00000344951 RIPK4P57078 832 aa18.08■□□□□ 0.48
CUL3-202ENST00000344951 CCDC73Q6ZRK6 1079 aa18.08■□□□□ 0.48
CUL3-202ENST00000344951 NASPP49321 788 aaPredicted RBP18.08■□□□□ 0.48
CUL3-202ENST00000344951 HSP90AB3PQ58FF7 597 aa18.08■□□□□ 0.48
CUL3-202ENST00000344951 BRMS1Q9HCU9 246 aa18.08■□□□□ 0.48
CUL3-202ENST00000344951 SMC2O95347 1197 aa18.07■□□□□ 0.48
CUL3-202ENST00000344951 DDX58O95786 925 aaKnown RBP18.07■□□□□ 0.48
CUL3-202ENST00000344951 SYCP1Q15431 976 aa18.07■□□□□ 0.48
CUL3-202ENST00000344951 RNF20Q5VTR2 975 aa18.07■□□□□ 0.48
CUL3-202ENST00000344951 RBM42Q9BTD8 480 aaKnown RBP18.07■□□□□ 0.48
CUL3-202ENST00000344951 NUCB2P80303 420 aa18.07■□□□□ 0.48
CUL3-202ENST00000344951 RBM5P52756 815 aaKnown RBP eCLIP18.07■□□□□ 0.48
CUL3-202ENST00000344951 CCDC191Q8NCU4 936 aa18.07■□□□□ 0.48
CUL3-202ENST00000344951 TSPYL4Q9UJ04 414 aa18.07■□□□□ 0.48
CUL3-202ENST00000344951 HSP90B2PQ58FF3 399 aa18.06■□□□□ 0.48
CUL3-202ENST00000344951 INTS3Q68E01 1043 aaKnown RBP18.06■□□□□ 0.48
CUL3-202ENST00000344951 PDCL3Q9H2J4 239 aa18.06■□□□□ 0.48
CUL3-202ENST00000344951 SMARCA2P51531 1590 aa18.06■□□□□ 0.48
CUL3-202ENST00000344951 TRAK2O60296 914 aa18.05■□□□□ 0.48
CUL3-202ENST00000344951 MATR3P43243 847 aaKnown RBP eCLIP18.05■□□□□ 0.483e-7■■■■□ 25.1
CUL3-202ENST00000344951 NLRP2Q9NX02 1062 aa18.05■□□□□ 0.48
CUL3-202ENST00000344951 ENOX2Q16206 610 aaKnown RBP18.05■□□□□ 0.48
CUL3-202ENST00000344951 NUTM2BA6NNL0 878 aaPredicted RBP18.05■□□□□ 0.48
CUL3-202ENST00000344951 NUTM2EB1AL46 878 aaPredicted RBP18.05■□□□□ 0.48
CUL3-202ENST00000344951 NUTM2AQ8IVF1 878 aaPredicted RBP18.05■□□□□ 0.48
CUL3-202ENST00000344951 CDCA7LQ96GN5 454 aa18.04■□□□□ 0.48
CUL3-202ENST00000344951 TSPYL1Q9H0U9 437 aa18.04■□□□□ 0.48
CUL3-202ENST00000344951 MYCNP04198 464 aaPredicted RBP18.04■□□□□ 0.48
CUL3-202ENST00000344951 SEPT11Q9NVA2 429 aaKnown RBP18.04■□□□□ 0.48
CUL3-202ENST00000344951 RUNDC1Q96C34 613 aa18.04■□□□□ 0.48
CUL3-202ENST00000344951 WASHC2AQ641Q2 1341 aa18.04■□□□□ 0.48
CUL3-202ENST00000344951 EVC2Q86UK5 1308 aa18.03■□□□□ 0.48
CUL3-202ENST00000344951 RSPH4AQ5TD94 716 aa18.03■□□□□ 0.48
CUL3-202ENST00000344951 CCDC39Q9UFE4 941 aa18.03■□□□□ 0.48
CUL3-202ENST00000344951 MPNDQ8N594 471 aa18.03■□□□□ 0.48
CUL3-202ENST00000344951 PIBF1Q8WXW3 757 aa18.03■□□□□ 0.48
CUL3-202ENST00000344951 STRN4Q9NRL3 753 aa18.03■□□□□ 0.48
CUL3-202ENST00000344951 CENPHQ9H3R5 247 aa18.03■□□□□ 0.48
CUL3-202ENST00000344951 SDF4Q9BRK5 362 aa18.02■□□□□ 0.48
CUL3-202ENST00000344951 DIAPH1O60610 1272 aaKnown RBP18.02■□□□□ 0.48
CUL3-202ENST00000344951 SEPT7Q16181 437 aaKnown RBP18.02■□□□□ 0.48
CUL3-202ENST00000344951 AXDND1Q5T1B0 1012 aaPredicted RBP18.02■□□□□ 0.48
CUL3-202ENST00000344951 TAX1BP1Q86VP1 789 aa18.01■□□□□ 0.47
CUL3-202ENST00000344951 API5Q9BZZ5 524 aaKnown RBP18.01■□□□□ 0.47
CUL3-202ENST00000344951 ARGLU1Q9NWB6 273 aaPredicted RBP18.01■□□□□ 0.47
CUL3-202ENST00000344951 MAGEC2Q9UBF1 373 aaPredicted RBP18.01■□□□□ 0.47
CUL3-202ENST00000344951 NOM1Q5C9Z4 860 aaKnown RBP18.01■□□□□ 0.47
CUL3-202ENST00000344951 SPC24Q8NBT2 197 aa18■□□□□ 0.47
CUL3-202ENST00000344951 TANGO6Q9C0B7 1094 aa18■□□□□ 0.47
CUL3-202ENST00000344951 ACBD3Q9H3P7 528 aa18■□□□□ 0.47
CUL3-202ENST00000344951 RDXP35241 583 aaKnown RBP18■□□□□ 0.47
CUL3-202ENST00000344951 RBM10P98175 930 aaKnown RBP18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms