RNA–Protein interactions for RNA: ENST00000343090.10

UBE4B-202, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best) BASIC

Gene UBE4B, Length 5,267 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-202ENST00000343090 GRPEL1Q9HAV7 217 aa9.85□□□□□ -0.83
UBE4B-202ENST00000343090 SYNJ2O15056 1496 aa9.84□□□□□ -0.83
UBE4B-202ENST00000343090 NASPP49321 788 aaPredicted RBP9.84□□□□□ -0.83
UBE4B-202ENST00000343090 TROQ12816 1431 aaPredicted RBP9.84□□□□□ -0.83
UBE4B-202ENST00000343090 INTS3Q68E01 1043 aaKnown RBP9.84□□□□□ -0.83
UBE4B-202ENST00000343090 OSCARQ8IYS5 282 aa9.84□□□□□ -0.83
UBE4B-202ENST00000343090 STAC3Q96MF2 364 aa9.84□□□□□ -0.83
UBE4B-202ENST00000343090 NOB1Q9ULX3 412 aaKnown RBP9.84□□□□□ -0.83
UBE4B-202ENST00000343090 ERBINQ96RT1 1412 aa9.84□□□□□ -0.83
UBE4B-202ENST00000343090 TPM4P67936 248 aa9.84□□□□□ -0.83
UBE4B-202ENST00000343090 FAM184AQ8NB25 1140 aa9.84□□□□□ -0.83
UBE4B-202ENST00000343090 SUPT6HQ7KZ85 1726 aaKnown RBP9.84□□□□□ -0.83
UBE4B-202ENST00000343090 IFIT2P09913 472 aaKnown RBP9.83□□□□□ -0.84
UBE4B-202ENST00000343090 PRAM1Q96QH2 718 aa9.83□□□□□ -0.84
UBE4B-202ENST00000343090 PDCL3Q9H2J4 239 aa9.83□□□□□ -0.84
UBE4B-202ENST00000343090 HECW1Q76N89 1606 aa9.83□□□□□ -0.84
UBE4B-202ENST00000343090 CLSTN1O94985 981 aa9.83□□□□□ -0.84
UBE4B-202ENST00000343090 FAM69CQ0P6D2 419 aa9.83□□□□□ -0.84
UBE4B-202ENST00000343090 CDC45O75419 566 aa9.82□□□□□ -0.84
UBE4B-202ENST00000343090 FOSBP53539 338 aa9.82□□□□□ -0.84
UBE4B-202ENST00000343090 EPRSP07814 1512 aaKnown RBP9.82□□□□□ -0.84
UBE4B-202ENST00000343090 VPS37CA5D8V6 355 aaPredicted RBP9.82□□□□□ -0.84
UBE4B-202ENST00000343090 ROCK1Q13464 1354 aa9.81□□□□□ -0.84
UBE4B-202ENST00000343090 C20orf194Q5TEA3 1177 aa9.81□□□□□ -0.84
UBE4B-202ENST00000343090 SNAPC4Q5SXM2 1469 aa9.81□□□□□ -0.84
UBE4B-202ENST00000343090 PSME1Q06323 249 aa9.81□□□□□ -0.84
UBE4B-202ENST00000343090 CCDC173Q0VFZ6 552 aa9.81□□□□□ -0.84
UBE4B-202ENST00000343090 NEXNQ0ZGT2 675 aa9.81□□□□□ -0.84
UBE4B-202ENST00000343090 PDE3AQ14432 1141 aa9.81□□□□□ -0.84
UBE4B-202ENST00000343090 PRDM10Q9NQV6 1147 aa9.81□□□□□ -0.84
UBE4B-202ENST00000343090 ATP6V1DQ9Y5K8 247 aa9.81□□□□□ -0.84
UBE4B-202ENST00000343090 ZKSCAN1P17029 563 aaPredicted RBP9.81□□□□□ -0.84
UBE4B-202ENST00000343090 AIMP1Q12904 312 aaKnown RBP9.81□□□□□ -0.84
UBE4B-202ENST00000343090 RASSF8Q8NHQ8 419 aa9.81□□□□□ -0.84
UBE4B-202ENST00000343090 CC2D2AQ9P2K1 1620 aa9.8□□□□□ -0.84
UBE4B-202ENST00000343090 TTC5Q8N0Z6 440 aa9.8□□□□□ -0.84
UBE4B-202ENST00000343090 RUFY2Q8WXA3 655 aa9.8□□□□□ -0.84
UBE4B-202ENST00000343090 UQCRHLA0A096LP55 91 aa9.8□□□□□ -0.84
UBE4B-202ENST00000343090 UQCRHP07919 91 aa9.8□□□□□ -0.84
UBE4B-202ENST00000343090 ZNF428Q96B54 188 aa9.8□□□□□ -0.84
UBE4B-202ENST00000343090 SCAPERQ9BY12 1400 aa9.8□□□□□ -0.84
UBE4B-202ENST00000343090 TWISTNBQ3B726 338 aaPredicted RBP9.8□□□□□ -0.84
UBE4B-202ENST00000343090 HMGXB3Q12766 1538 aa9.8□□□□□ -0.84
UBE4B-202ENST00000343090 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.8□□□□□ -0.84
UBE4B-202ENST00000343090 CABP1Q9NZU7 370 aa9.8□□□□□ -0.84
UBE4B-202ENST00000343090 ANKRD30BQ9BXX2 1392 aa9.79□□□□□ -0.84
UBE4B-202ENST00000343090 AAMPQ13685 434 aa9.79□□□□□ -0.84
UBE4B-202ENST00000343090 FBXW7Q969H0 707 aa9.79□□□□□ -0.84
UBE4B-202ENST00000343090 KIF3AQ9Y496 699 aa9.79□□□□□ -0.84
UBE4B-202ENST00000343090 MCM4P33991 863 aa9.79□□□□□ -0.84
UBE4B-202ENST00000343090 TXNDC2Q86VQ3 553 aa9.79□□□□□ -0.84
UBE4B-202ENST00000343090 BECN2A8MW95 431 aa9.79□□□□□ -0.84
UBE4B-202ENST00000343090 GOLGA6L19H0YKK7 550 aa9.79□□□□□ -0.84
UBE4B-202ENST00000343090 G3BP1Q13283 466 aaKnown RBP eCLIP9.79□□□□□ -0.84
UBE4B-202ENST00000343090 NLRP6P59044 892 aa9.79□□□□□ -0.84
UBE4B-202ENST00000343090 NUCB2P80303 420 aa9.79□□□□□ -0.84
UBE4B-202ENST00000343090 RNF214Q8ND24 703 aa9.79□□□□□ -0.84
UBE4B-202ENST00000343090 SMC3Q9UQE7 1217 aa9.79□□□□□ -0.84
UBE4B-202ENST00000343090 MRC2Q9UBG0 1479 aa9.78□□□□□ -0.84
UBE4B-202ENST00000343090 ZNF592Q92610 1267 aa9.78□□□□□ -0.84
UBE4B-202ENST00000343090 CDK19Q9BWU1 502 aa9.78□□□□□ -0.84
UBE4B-202ENST00000343090 UBTFL1P0CB47 393 aaPredicted RBP9.78□□□□□ -0.84
UBE4B-202ENST00000343090 GTF2E1P29083 439 aaPredicted RBP9.78□□□□□ -0.84
UBE4B-202ENST00000343090 CLCN1P35523 988 aa9.78□□□□□ -0.84
UBE4B-202ENST00000343090 DNMBPQ6XZF7 1577 aa9.78□□□□□ -0.84
UBE4B-202ENST00000343090 BICD2Q8TD16 824 aa9.77□□□□□ -0.84
UBE4B-202ENST00000343090 ZHX1Q9UKY1 873 aaPredicted RBP9.77□□□□□ -0.84
UBE4B-202ENST00000343090 PTPN23Q9H3S7 1636 aa9.77□□□□□ -0.84
UBE4B-202ENST00000343090 ARHGEF11O15085 1522 aa9.77□□□□□ -0.85
UBE4B-202ENST00000343090 SLFN5Q08AF3 891 aa9.77□□□□□ -0.85
UBE4B-202ENST00000343090 RRAGDQ9NQL2 400 aaPredicted RBP9.77□□□□□ -0.85
UBE4B-202ENST00000343090 ABCC5O15440 1437 aa9.77□□□□□ -0.85
UBE4B-202ENST00000343090 CAVIN1Q6NZI2 390 aaKnown RBP9.77□□□□□ -0.85
UBE4B-202ENST00000343090 BCL11BQ9C0K0 894 aaPredicted RBP9.77□□□□□ -0.85
UBE4B-202ENST00000343090 CCDC39Q9UFE4 941 aa9.77□□□□□ -0.85
UBE4B-202ENST00000343090 MVPQ14764 893 aaKnown RBP9.76□□□□□ -0.85
UBE4B-202ENST00000343090 APPP05067 770 aa9.76□□□□□ -0.85
UBE4B-202ENST00000343090 NEK4P51957 841 aa9.76□□□□□ -0.85
UBE4B-202ENST00000343090 EVA1CP58658 441 aa9.76□□□□□ -0.85
UBE4B-202ENST00000343090 CCDC27Q2M243 656 aa9.76□□□□□ -0.85
UBE4B-202ENST00000343090 WWC1Q8IX03 1113 aa9.76□□□□□ -0.85
UBE4B-202ENST00000343090 IFT140Q96RY7 1462 aa9.76□□□□□ -0.85
UBE4B-202ENST00000343090 PES1O00541 588 aaKnown RBP9.76□□□□□ -0.85
UBE4B-202ENST00000343090 SURF6O75683 361 aaKnown RBP9.76□□□□□ -0.85
UBE4B-202ENST00000343090 DDX58O95786 925 aaKnown RBP9.76□□□□□ -0.85
UBE4B-202ENST00000343090 PDE4CQ08493 712 aa9.76□□□□□ -0.85
UBE4B-202ENST00000343090 SULT6B1Q6IMI4 303 aa9.76□□□□□ -0.85
UBE4B-202ENST00000343090 DNAJC5BQ9UF47 199 aa9.76□□□□□ -0.85
UBE4B-202ENST00000343090 ATF7IPQ6VMQ6 1270 aa9.76□□□□□ -0.85
UBE4B-202ENST00000343090 SLC4A2P04920 1241 aa9.76□□□□□ -0.85
UBE4B-202ENST00000343090 CCDC34Q96HJ3 373 aa9.76□□□□□ -0.85
UBE4B-202ENST00000343090 RIC3Q7Z5B4 369 aa9.75□□□□□ -0.85
UBE4B-202ENST00000343090 PRPF40AO75400 957 aaKnown RBP9.75□□□□□ -0.85
UBE4B-202ENST00000343090 WDR63Q8IWG1 891 aa9.75□□□□□ -0.85
UBE4B-202ENST00000343090 NEUROD6Q96NK8 337 aa9.75□□□□□ -0.85
UBE4B-202ENST00000343090 RAPGEF3O95398 923 aa9.75□□□□□ -0.85
UBE4B-202ENST00000343090 RRS1Q15050 365 aaKnown RBP9.75□□□□□ -0.85
UBE4B-202ENST00000343090 CAMSAP2Q08AD1 1489 aa9.75□□□□□ -0.85
UBE4B-202ENST00000343090 ZSCAN30Q86W11 494 aa9.75□□□□□ -0.85
UBE4B-202ENST00000343090 SYTL4Q96C24 671 aaPredicted RBP9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms