RNA–Protein interactions for RNA: ENST00000342916.7

EGFR-202, Transcript of epidermal growth factor receptor, humanhuman

TSL 1 (best) BASIC

Gene EGFR, Length 2,239 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EGFR-202ENST00000342916 STRCP1A6NGW2 1772 aa26.06■■□□□ 1.76
EGFR-202ENST00000342916 DLC1Q96QB1 1528 aa26.06■■□□□ 1.76
EGFR-202ENST00000342916 POGKQ9P215 609 aa26.05■■□□□ 1.76
EGFR-202ENST00000342916 TMF1P82094 1093 aa26.04■■□□□ 1.76
EGFR-202ENST00000342916 RBM33Q96EV2 1170 aaKnown RBP26.04■■□□□ 1.76
EGFR-202ENST00000342916 PIK3R4Q99570 1358 aa26.04■■□□□ 1.76
EGFR-202ENST00000342916 MINK1Q8N4C8 1332 aaPredicted RBP26.02■■□□□ 1.76
EGFR-202ENST00000342916 SIPA1L2Q9P2F8 1722 aaPredicted RBP26■■□□□ 1.75
EGFR-202ENST00000342916 NWD1Q149M9 1564 aa25.99■■□□□ 1.75
EGFR-202ENST00000342916 PTCH1Q13635 1447 aa25.98■■□□□ 1.75
EGFR-202ENST00000342916 FAM135BQ49AJ0 1406 aa25.98■■□□□ 1.75
EGFR-202ENST00000342916 CCDC184Q52MB2 194 aa25.98■■□□□ 1.75
EGFR-202ENST00000342916 TULP4Q9NRJ4 1543 aa25.97■■□□□ 1.75
EGFR-202ENST00000342916 SBNO2Q9Y2G9 1366 aa25.96■■□□□ 1.75
EGFR-202ENST00000342916 ZNF335Q9H4Z2 1342 aaPredicted RBP25.95■■□□□ 1.75
EGFR-202ENST00000342916 SCAF1Q9H7N4 1312 aaKnown RBP25.95■■□□□ 1.74
EGFR-202ENST00000342916 SIRT1Q96EB6 747 aa25.94■■□□□ 1.74
EGFR-202ENST00000342916 MYOM1P52179 1685 aa25.93■■□□□ 1.74
EGFR-202ENST00000342916 CNGB1Q14028 1251 aaPredicted RBP25.92■■□□□ 1.74
EGFR-202ENST00000342916 NALCNQ8IZF0 1738 aa25.91■■□□□ 1.74
EGFR-202ENST00000342916 PER1O15534 1290 aaPredicted RBP25.91■■□□□ 1.74
EGFR-202ENST00000342916 CABP2Q9NPB3 220 aa25.88■■□□□ 1.73
EGFR-202ENST00000342916 DMRT2Q9Y5R5 561 aa25.88■■□□□ 1.73
EGFR-202ENST00000342916 CDCA8Q53HL2 280 aa25.87■■□□□ 1.73
EGFR-202ENST00000342916 PANK3Q9H999 370 aa25.87■■□□□ 1.73
EGFR-202ENST00000342916 NKTRP30414 1462 aaKnown RBP25.87■■□□□ 1.73
EGFR-202ENST00000342916 PROSER2Q86WR7 435 aaPredicted RBP25.87■■□□□ 1.73
EGFR-202ENST00000342916 MRS2Q9HD23 443 aa25.87■■□□□ 1.73
EGFR-202ENST00000342916 EVC2Q86UK5 1308 aa25.86■■□□□ 1.73
EGFR-202ENST00000342916 CDK19Q9BWU1 502 aa25.86■■□□□ 1.73
EGFR-202ENST00000342916 XIRP1Q702N8 1843 aaKnown RBP25.85■■□□□ 1.73
EGFR-202ENST00000342916 SRPK2P78362 688 aaKnown RBP25.84■■□□□ 1.73
EGFR-202ENST00000342916 ADGRB2O60241 1585 aa25.84■■□□□ 1.73
EGFR-202ENST00000342916 NUTM2FA1L443 756 aa25.83■■□□□ 1.73
EGFR-202ENST00000342916 SLC24A1O60721 1099 aa25.83■■□□□ 1.72
EGFR-202ENST00000342916 TMEM94Q12767 1356 aa25.82■■□□□ 1.72
EGFR-202ENST00000342916 KTN1Q86UP2 1357 aaKnown RBP25.82■■□□□ 1.72
EGFR-202ENST00000342916 WASLO00401 505 aaPredicted RBP25.82■■□□□ 1.72
EGFR-202ENST00000342916 C14orf37Q86TY3 774 aa25.81■■□□□ 1.72
EGFR-202ENST00000342916 GTF3C3Q9Y5Q9 886 aa25.8■■□□□ 1.72
EGFR-202ENST00000342916 PARD3Q8TEW0 1356 aa25.8■■□□□ 1.72
EGFR-202ENST00000342916 RGPD8O14715 1765 aaPredicted RBP25.8■■□□□ 1.72
EGFR-202ENST00000342916 LRRC7Q96NW7 1537 aa25.79■■□□□ 1.72
EGFR-202ENST00000342916 RALBP1Q15311 655 aa25.79■■□□□ 1.72
EGFR-202ENST00000342916 ADGRL3Q9HAR2 1447 aa25.78■■□□□ 1.72
EGFR-202ENST00000342916 PRR36Q9H6K5 1346 aa25.77■■□□□ 1.72
EGFR-202ENST00000342916 USP32Q8NFA0 1604 aa25.76■■□□□ 1.71
EGFR-202ENST00000342916 MYBBP1AQ9BQG0 1328 aaKnown RBP25.76■■□□□ 1.71
EGFR-202ENST00000342916 TMC1Q8TDI8 760 aa25.75■■□□□ 1.71
EGFR-202ENST00000342916 FMN2Q9NZ56 1722 aa25.75■■□□□ 1.71
EGFR-202ENST00000342916 FAM9BQ8IZU0 186 aa25.75■■□□□ 1.71
EGFR-202ENST00000342916 SLC12A5Q9H2X9 1139 aa25.75■■□□□ 1.71
EGFR-202ENST00000342916 CDC42BPGQ6DT37 1551 aa25.74■■□□□ 1.71
EGFR-202ENST00000342916 ATP7BP35670 1465 aa25.74■■□□□ 1.71
EGFR-202ENST00000342916 NUDT16Q96DE0 195 aaKnown RBP25.72■■□□□ 1.71
EGFR-202ENST00000342916 LTBP4Q8N2S1 1624 aa25.72■■□□□ 1.71
EGFR-202ENST00000342916 HNRNPUQ00839 825 aaKnown RBP eCLIP25.72■■□□□ 1.71
EGFR-202ENST00000342916 CC2D1BQ5T0F9 858 aaKnown RBP25.72■■□□□ 1.71
EGFR-202ENST00000342916 BRD4O60885 1362 aaPredicted RBP25.7■■□□□ 1.7
EGFR-202ENST00000342916 CABP1Q9NZU7 370 aa25.69■■□□□ 1.7
EGFR-202ENST00000342916 ATAD2Q6PL18 1390 aa25.69■■□□□ 1.7
EGFR-202ENST00000342916 C19orf44Q9H6X5 657 aa25.68■■□□□ 1.7
EGFR-202ENST00000342916 KNSTRNQ9Y448 316 aa25.68■■□□□ 1.7
EGFR-202ENST00000342916 TOPAZ1Q8N9V7 1692 aa25.68■■□□□ 1.7
EGFR-202ENST00000342916 AMER1Q5JTC6 1135 aaPredicted RBP25.68■■□□□ 1.7
EGFR-202ENST00000342916 PUS7Q96PZ0 661 aaKnown RBP25.67■■□□□ 1.7
EGFR-202ENST00000342916 PPIP5K1Q6PFW1 1433 aa25.67■■□□□ 1.7
EGFR-202ENST00000342916 NLRP13Q86W25 1043 aa25.65■■□□□ 1.7
EGFR-202ENST00000342916 PNISRQ8TF01 805 aaKnown RBP25.65■■□□□ 1.7
EGFR-202ENST00000342916 CD163L1Q9NR16 1453 aa25.64■■□□□ 1.7
EGFR-202ENST00000342916 CCDC61Q9Y6R9 512 aa25.64■■□□□ 1.69
EGFR-202ENST00000342916 NCOA3Q9Y6Q9 1424 aa25.64■■□□□ 1.69
EGFR-202ENST00000342916 MSH6P52701 1360 aa25.63■■□□□ 1.69
EGFR-202ENST00000342916 CARD14Q9BXL6 1004 aa25.63■■□□□ 1.69
EGFR-202ENST00000342916 ITSN1Q15811 1721 aa25.62■■□□□ 1.69
EGFR-202ENST00000342916 PMFBP1Q8TBY8 1022 aa25.61■■□□□ 1.69
EGFR-202ENST00000342916 A0A1W2PP64 1363 aa25.61■■□□□ 1.69
EGFR-202ENST00000342916 NPC1L1Q9UHC9 1359 aa25.61■■□□□ 1.69
EGFR-202ENST00000342916 ATF3P18847 181 aa25.61■■□□□ 1.69
EGFR-202ENST00000342916 ANKARQ7Z5J8 1434 aa25.59■■□□□ 1.69
EGFR-202ENST00000342916 ORAI2Q96SN7 254 aa25.59■■□□□ 1.69
EGFR-202ENST00000342916 MST1RQ04912 1400 aa25.58■■□□□ 1.69
EGFR-202ENST00000342916 DCCP43146 1447 aa25.58■■□□□ 1.69
EGFR-202ENST00000342916 ANKRD36BQ8N2N9 1353 aa25.57■■□□□ 1.68
EGFR-202ENST00000342916 NINLQ9Y2I6 1382 aa25.57■■□□□ 1.68
EGFR-202ENST00000342916 AKAP12Q02952 1782 aa25.57■■□□□ 1.68
EGFR-202ENST00000342916 C1orf167Q5SNV9 1468 aa25.56■■□□□ 1.68
EGFR-202ENST00000342916 ESCO1Q5FWF5 840 aa25.56■■□□□ 1.68
EGFR-202ENST00000342916 ACEP12821 1306 aa25.55■■□□□ 1.68
EGFR-202ENST00000342916 NSD3Q9BZ95 1437 aa25.55■■□□□ 1.68
EGFR-202ENST00000342916 CADPS2Q86UW7 1296 aa25.55■■□□□ 1.68
EGFR-202ENST00000342916 CPSF1Q10570 1443 aaKnown RBP25.53■■□□□ 1.68
EGFR-202ENST00000342916 ZBED9Q6R2W3 1325 aa25.53■■□□□ 1.68
EGFR-202ENST00000342916 PLEKHG3A1L390 1219 aa25.53■■□□□ 1.68
EGFR-202ENST00000342916 TERF2IPQ9NYB0 399 aa25.53■■□□□ 1.68
EGFR-202ENST00000342916 MON2Q7Z3U7 1717 aa25.53■■□□□ 1.68
EGFR-202ENST00000342916 PPP2R1AP30153 589 aa25.51■■□□□ 1.67
EGFR-202ENST00000342916 PHF8Q9UPP1 1060 aa25.51■■□□□ 1.67
EGFR-202ENST00000342916 HDGFL2Q7Z4V5 671 aaPredicted RBP25.51■■□□□ 1.67
EGFR-202ENST00000342916 NGDNQ8NEJ9 315 aaKnown RBP25.5■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms