RNA–Protein interactions for RNA: ENST00000342895.7

LRRC39-201, Transcript of leucine rich repeat containing 39, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LRRC39, Length 1,881 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39-201ENST00000342895 KDM4CQ9H3R0 1056 aa6.89□□□□□ -1.31
LRRC39-201ENST00000342895 LCE3BQ5TA77 95 aa6.88□□□□□ -1.31
LRRC39-201ENST00000342895 TBC1D2Q9BYX2 928 aa6.88□□□□□ -1.31
LRRC39-201ENST00000342895 MSS51Q4VC12 460 aa6.87□□□□□ -1.31
LRRC39-201ENST00000342895 SLC6A16Q9GZN6 736 aa6.87□□□□□ -1.31
LRRC39-201ENST00000342895 FDX1P10109 184 aa6.87□□□□□ -1.31
LRRC39-201ENST00000342895 MOXD2PA6NHM9 499 aa6.86□□□□□ -1.31
LRRC39-201ENST00000342895 TUSC1Q2TAM9 212 aa6.86□□□□□ -1.31
LRRC39-201ENST00000342895 RNF19BQ6ZMZ0 732 aa6.86□□□□□ -1.31
LRRC39-201ENST00000342895 HLA-CQ95604 372 aa6.86□□□□□ -1.31
LRRC39-201ENST00000342895 DDRGK1Q96HY6 314 aa6.86□□□□□ -1.31
LRRC39-201ENST00000342895 KRTAP4-7Q9BYR0 210 aa6.86□□□□□ -1.31
LRRC39-201ENST00000342895 RSPH6AQ9H0K4 717 aa6.86□□□□□ -1.31
LRRC39-201ENST00000342895 SPTLC1O15269 473 aa6.85□□□□□ -1.31
LRRC39-201ENST00000342895 RSBN1LQ6PCB5 846 aaPredicted RBP6.85□□□□□ -1.31
LRRC39-201ENST00000342895 FAM160A2Q8N612 972 aaPredicted RBP6.85□□□□□ -1.31
LRRC39-201ENST00000342895 ANKLE1Q8NAG6 615 aa6.85□□□□□ -1.31
LRRC39-201ENST00000342895 GPBP1L1Q9HC44 474 aaPredicted RBP6.85□□□□□ -1.31
LRRC39-201ENST00000342895 S1PR4O95977 384 aa6.85□□□□□ -1.31
LRRC39-201ENST00000342895 USB1Q9BQ65 265 aaKnown RBP6.85□□□□□ -1.31
LRRC39-201ENST00000342895 KRTAP9-8Q9BYQ0 159 aa6.85□□□□□ -1.31
LRRC39-201ENST00000342895 PCDHGC3Q9UN70 934 aa6.85□□□□□ -1.31
LRRC39-201ENST00000342895 RNF223E7ERA6 249 aa6.84□□□□□ -1.31
LRRC39-201ENST00000342895 NDUFV2P19404 249 aa6.84□□□□□ -1.31
LRRC39-201ENST00000342895 GUCA2AQ02747 115 aa6.84□□□□□ -1.31
LRRC39-201ENST00000342895 SPDYE5A6NIY4 337 aa6.83□□□□□ -1.32
LRRC39-201ENST00000342895 MMP16P51512 607 aa6.83□□□□□ -1.32
LRRC39-201ENST00000342895 MYSM1Q5VVJ2 828 aa6.83□□□□□ -1.32
LRRC39-201ENST00000342895 RETREG3Q86VR2 466 aa6.83□□□□□ -1.32
LRRC39-201ENST00000342895 BRPF1P55201 1214 aaPredicted RBP6.83□□□□□ -1.32
LRRC39-201ENST00000342895 PRPF38BQ5VTL8 546 aaKnown RBP6.83□□□□□ -1.32
LRRC39-201ENST00000342895 RIC3Q7Z5B4 369 aa6.83□□□□□ -1.32
LRRC39-201ENST00000342895 V9GY48 417 aaPredicted RBP6.83□□□□□ -1.32
LRRC39-201ENST00000342895 NEUROD2Q15784 382 aa6.82□□□□□ -1.32
LRRC39-201ENST00000342895 KRTAP5-3Q6L8H2 238 aa6.82□□□□□ -1.32
LRRC39-201ENST00000342895 KRTAP9-9Q9BYP9 154 aa6.82□□□□□ -1.32
LRRC39-201ENST00000342895 KRTAP9-4Q9BYQ2 154 aa6.82□□□□□ -1.32
LRRC39-201ENST00000342895 FAM117AQ9C073 453 aa6.82□□□□□ -1.32
LRRC39-201ENST00000342895 DXOO77932 396 aaKnown RBP6.81□□□□□ -1.32
LRRC39-201ENST00000342895 PLEKHG3A1L390 1219 aa6.81□□□□□ -1.32
LRRC39-201ENST00000342895 MTMR2Q13614 643 aa6.81□□□□□ -1.32
LRRC39-201ENST00000342895 SH3D19Q5HYK7 790 aa6.81□□□□□ -1.32
LRRC39-201ENST00000342895 C6orf229H3BNL8 230 aa6.8□□□□□ -1.32
LRRC39-201ENST00000342895 SKIV2LQ15477 1246 aaKnown RBP6.8□□□□□ -1.32
LRRC39-201ENST00000342895 TRAF7Q6Q0C0 670 aa6.8□□□□□ -1.32
LRRC39-201ENST00000342895 ZBTB3Q9H5J0 574 aa6.8□□□□□ -1.32
LRRC39-201ENST00000342895 PRKCSHP14314 528 aaPredicted RBP6.79□□□□□ -1.32
LRRC39-201ENST00000342895 JUNDP17535 347 aa6.79□□□□□ -1.32
LRRC39-201ENST00000342895 CLK2P49760 499 aaKnown RBP6.79□□□□□ -1.32
LRRC39-201ENST00000342895 DESI1Q6ICB0 168 aa6.79□□□□□ -1.32
LRRC39-201ENST00000342895 SYMPKQ92797 1274 aaKnown RBP6.79□□□□□ -1.32
LRRC39-201ENST00000342895 GOPCQ9HD26 462 aa6.79□□□□□ -1.32
LRRC39-201ENST00000342895 PRDM9Q9NQV7 894 aa6.79□□□□□ -1.32
LRRC39-201ENST00000342895 LIMD1Q9UGP4 676 aa6.79□□□□□ -1.32
LRRC39-201ENST00000342895 PPEF1O14829 653 aaPredicted RBP6.79□□□□□ -1.32
LRRC39-201ENST00000342895 PRKD2Q9BZL6 878 aa6.79□□□□□ -1.32
LRRC39-201ENST00000342895 PCDHB15Q9Y5E8 787 aa6.79□□□□□ -1.32
LRRC39-201ENST00000342895 LILRB3O75022 631 aa6.77□□□□□ -1.33
LRRC39-201ENST00000342895 HRCP23327 699 aa6.77□□□□□ -1.33
LRRC39-201ENST00000342895 RPIAP49247 311 aa6.77□□□□□ -1.33
LRRC39-201ENST00000342895 EMID1Q96A84 441 aaPredicted RBP6.77□□□□□ -1.33
LRRC39-201ENST00000342895 FCF1Q9Y324 198 aaKnown RBP6.77□□□□□ -1.33
LRRC39-201ENST00000342895 SLC19A1P41440 591 aa6.77□□□□□ -1.33
LRRC39-201ENST00000342895 PRR7Q8TB68 274 aa6.77□□□□□ -1.33
LRRC39-201ENST00000342895 PLA2G2CQ5R387 149 aa6.76□□□□□ -1.33
LRRC39-201ENST00000342895 PTPRNQ16849 979 aa6.75□□□□□ -1.33
LRRC39-201ENST00000342895 ZNF787Q6DD87 383 aa6.75□□□□□ -1.33
LRRC39-201ENST00000342895 LIAT1Q6ZQX7 453 aa6.75□□□□□ -1.33
LRRC39-201ENST00000342895 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.75□□□□□ -1.33
LRRC39-201ENST00000342895 POLR3EQ9NVU0 708 aa6.75□□□□□ -1.33
LRRC39-201ENST00000342895 SPRYD7Q5W111 196 aa6.75□□□□□ -1.33
LRRC39-201ENST00000342895 QPCTQ16769 361 aa6.74□□□□□ -1.33
LRRC39-201ENST00000342895 PPP2R2DQ66LE6 453 aa6.74□□□□□ -1.33
LRRC39-201ENST00000342895 ZNF598Q86UK7 904 aaKnown RBP6.74□□□□□ -1.33
LRRC39-201ENST00000342895 CABLES1Q8TDN4 633 aa6.74□□□□□ -1.33
LRRC39-201ENST00000342895 CFAP99D6REC4 459 aa6.73□□□□□ -1.33
LRRC39-201ENST00000342895 NUTM2BA6NNL0 878 aaPredicted RBP6.73□□□□□ -1.33
LRRC39-201ENST00000342895 NUTM2EB1AL46 878 aaPredicted RBP6.73□□□□□ -1.33
LRRC39-201ENST00000342895 CSPP1Q1MSJ5 1256 aa6.73□□□□□ -1.33
LRRC39-201ENST00000342895 NUTM2DQ5VT03 806 aaPredicted RBP6.73□□□□□ -1.33
LRRC39-201ENST00000342895 LYPD8Q6UX82 237 aa6.73□□□□□ -1.33
LRRC39-201ENST00000342895 NUTM2AQ8IVF1 878 aaPredicted RBP6.73□□□□□ -1.33
LRRC39-201ENST00000342895 NUDT12Q9BQG2 462 aa6.73□□□□□ -1.33
LRRC39-201ENST00000342895 ZBTB24O43167 697 aaPredicted RBP6.72□□□□□ -1.33
LRRC39-201ENST00000342895 CD2BP2O95400 341 aaKnown RBP6.72□□□□□ -1.33
LRRC39-201ENST00000342895 CCNYL3P0C7X3 344 aa6.72□□□□□ -1.33
LRRC39-201ENST00000342895 IL27Q8NEV9 243 aa6.72□□□□□ -1.33
LRRC39-201ENST00000342895 LCE2BO14633 110 aa6.71□□□□□ -1.34
LRRC39-201ENST00000342895 RTL5Q5HYW3 569 aaPredicted RBP6.71□□□□□ -1.34
LRRC39-201ENST00000342895 PROCA1Q8NCQ7 364 aaPredicted RBP6.71□□□□□ -1.34
LRRC39-201ENST00000342895 EVA1BQ9NVM1 165 aa6.71□□□□□ -1.34
LRRC39-201ENST00000342895 PCMTD1Q96MG8 357 aaPredicted RBP6.7□□□□□ -1.34
LRRC39-201ENST00000342895 LAPTM4AQ15012 233 aa6.7□□□□□ -1.34
LRRC39-201ENST00000342895 CCDC24Q8N4L8 307 aa6.7□□□□□ -1.34
LRRC39-201ENST00000342895 HELBQ8NG08 1087 aaPredicted RBP6.7□□□□□ -1.34
LRRC39-201ENST00000342895 PRR20EP86478 221 aa6.69□□□□□ -1.34
LRRC39-201ENST00000342895 PRR20CP86479 221 aa6.69□□□□□ -1.34
LRRC39-201ENST00000342895 PRR20DP86480 221 aa6.69□□□□□ -1.34
LRRC39-201ENST00000342895 PRR20BP86481 221 aa6.69□□□□□ -1.34
LRRC39-201ENST00000342895 PRR20AP86496 221 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms