RNA–Protein interactions for RNA: ENST00000342887.1

CFAP54-201, Transcript of cilia and flagella associated protein 54, humanhuman

TSL 2

Gene CFAP54, Length 3,686 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54-201ENST00000342887 ADGRF5Q8IZF2 1346 aa11.05□□□□□ -0.64
CFAP54-201ENST00000342887 NSD2O96028 1365 aa11.04□□□□□ -0.64
CFAP54-201ENST00000342887 NINLQ9Y2I6 1382 aa11.04□□□□□ -0.64
CFAP54-201ENST00000342887 A2ML1A8K2U0 1454 aa11.04□□□□□ -0.64
CFAP54-201ENST00000342887 CARD14Q9BXL6 1004 aa11.03□□□□□ -0.64
CFAP54-201ENST00000342887 MAP2P11137 1827 aaKnown RBP11.03□□□□□ -0.64
CFAP54-201ENST00000342887 ABCC11Q96J66 1382 aa11.02□□□□□ -0.65
CFAP54-201ENST00000342887 PEAK1Q9H792 1746 aa11.02□□□□□ -0.65
CFAP54-201ENST00000342887 ATP7BP35670 1465 aa11.02□□□□□ -0.65
CFAP54-201ENST00000342887 DIP2AQ14689 1571 aa11.02□□□□□ -0.65
CFAP54-201ENST00000342887 CAMTA1Q9Y6Y1 1673 aa11.02□□□□□ -0.65
CFAP54-201ENST00000342887 PPP2R1AP30153 589 aa11.01□□□□□ -0.65
CFAP54-201ENST00000342887 PPIP5K1Q6PFW1 1433 aa11.01□□□□□ -0.65
CFAP54-201ENST00000342887 RRP1P56182 461 aaKnown RBP11□□□□□ -0.65
CFAP54-201ENST00000342887 YTHDC2Q9H6S0 1430 aaKnown RBP11□□□□□ -0.65
CFAP54-201ENST00000342887 DUSP27Q5VZP5 1158 aa11□□□□□ -0.65
CFAP54-201ENST00000342887 SLIT1O75093 1534 aa11□□□□□ -0.65
CFAP54-201ENST00000342887 TMF1P82094 1093 aa10.99□□□□□ -0.65
CFAP54-201ENST00000342887 PANK3Q9H999 370 aa10.99□□□□□ -0.65
CFAP54-201ENST00000342887 NKTRP30414 1462 aaKnown RBP10.99□□□□□ -0.65
CFAP54-201ENST00000342887 ANKRD36BQ8N2N9 1353 aa10.99□□□□□ -0.65
CFAP54-201ENST00000342887 CPSF1Q10570 1443 aaKnown RBP10.99□□□□□ -0.65
CFAP54-201ENST00000342887 SLC24A1O60721 1099 aa10.98□□□□□ -0.65
CFAP54-201ENST00000342887 CRYBG1Q9Y4K1 1723 aa10.98□□□□□ -0.65
CFAP54-201ENST00000342887 ARHGAP23Q9P227 1491 aa10.98□□□□□ -0.65
CFAP54-201ENST00000342887 NGEFQ8N5V2 710 aa10.97□□□□□ -0.65
CFAP54-201ENST00000342887 ADAMTS7Q9UKP4 1686 aa10.96□□□□□ -0.65
CFAP54-201ENST00000342887 CCDC27Q2M243 656 aa10.95□□□□□ -0.66
CFAP54-201ENST00000342887 TSPOAP1O95153 1857 aa10.95□□□□□ -0.66
CFAP54-201ENST00000342887 PPP6R1Q9UPN7 881 aa10.94□□□□□ -0.66
CFAP54-201ENST00000342887 FAM135BQ49AJ0 1406 aa10.94□□□□□ -0.66
CFAP54-201ENST00000342887 PIK3C2AO00443 1686 aa10.94□□□□□ -0.66
CFAP54-201ENST00000342887 SLFN5Q08AF3 891 aa10.94□□□□□ -0.66
CFAP54-201ENST00000342887 FAM9BQ8IZU0 186 aa10.93□□□□□ -0.66
CFAP54-201ENST00000342887 SALL2Q9Y467 1007 aaPredicted RBP10.93□□□□□ -0.66
CFAP54-201ENST00000342887 SSH2Q76I76 1423 aa10.93□□□□□ -0.66
CFAP54-201ENST00000342887 SIPA1L3O60292 1781 aaPredicted RBP10.91□□□□□ -0.66
CFAP54-201ENST00000342887 FAM208AQ9UK61 1670 aaKnown RBP10.91□□□□□ -0.66
CFAP54-201ENST00000342887 CCDC136Q96JN2 1154 aa10.91□□□□□ -0.66
CFAP54-201ENST00000342887 CHD2O14647 1828 aaKnown RBP10.91□□□□□ -0.66
CFAP54-201ENST00000342887 NSD3Q9BZ95 1437 aa10.91□□□□□ -0.66
CFAP54-201ENST00000342887 MS4A1P11836 297 aa10.9□□□□□ -0.66
CFAP54-201ENST00000342887 CDCA8Q53HL2 280 aa10.9□□□□□ -0.66
CFAP54-201ENST00000342887 ADAMTS8Q9UP79 889 aa10.9□□□□□ -0.66
CFAP54-201ENST00000342887 LMTK3Q96Q04 1460 aa10.9□□□□□ -0.66
CFAP54-201ENST00000342887 RGPD8O14715 1765 aaPredicted RBP10.9□□□□□ -0.66
CFAP54-201ENST00000342887 FER1L4A9Z1Z3 1794 aa10.9□□□□□ -0.66
CFAP54-201ENST00000342887 CDK12Q9NYV4 1490 aaPredicted RBP10.9□□□□□ -0.66
CFAP54-201ENST00000342887 CFAP70Q5T0N1 1121 aa10.89□□□□□ -0.67
CFAP54-201ENST00000342887 OSCARQ8IYS5 282 aa10.89□□□□□ -0.67
CFAP54-201ENST00000342887 KDM2AQ9Y2K7 1162 aa10.89□□□□□ -0.67
CFAP54-201ENST00000342887 LMO7Q8WWI1 1683 aa10.89□□□□□ -0.67
CFAP54-201ENST00000342887 NWD1Q149M9 1564 aa10.89□□□□□ -0.67
CFAP54-201ENST00000342887 MED1Q15648 1581 aaPredicted RBP10.89□□□□□ -0.67
CFAP54-201ENST00000342887 PLEKHF1Q96S99 279 aa10.89□□□□□ -0.67
CFAP54-201ENST00000342887 SPINK5Q9NQ38 1064 aaPredicted RBP10.88□□□□□ -0.67
CFAP54-201ENST00000342887 CDCA7LQ96GN5 454 aa10.88□□□□□ -0.67
CFAP54-201ENST00000342887 RCAN3Q9UKA8 241 aa10.88□□□□□ -0.67
CFAP54-201ENST00000342887 KIF3BO15066 747 aa10.87□□□□□ -0.67
CFAP54-201ENST00000342887 NEFLP07196 543 aa10.87□□□□□ -0.67
CFAP54-201ENST00000342887 SIRT1Q96EB6 747 aa10.87□□□□□ -0.67
CFAP54-201ENST00000342887 A0A1W2PP64 1363 aa10.87□□□□□ -0.67
CFAP54-201ENST00000342887 PIK3R4Q99570 1358 aa10.87□□□□□ -0.67
CFAP54-201ENST00000342887 ADAMTS13Q76LX8 1427 aa10.87□□□□□ -0.67
CFAP54-201ENST00000342887 TMC1Q8TDI8 760 aa10.87□□□□□ -0.67
CFAP54-201ENST00000342887 CENPJQ9HC77 1338 aaPredicted RBP10.86□□□□□ -0.67
CFAP54-201ENST00000342887 KDM3BQ7LBC6 1761 aa10.85□□□□□ -0.67
CFAP54-201ENST00000342887 DMRT2Q9Y5R5 561 aa10.85□□□□□ -0.67
CFAP54-201ENST00000342887 AATKQ6ZMQ8 1374 aa10.85□□□□□ -0.67
CFAP54-201ENST00000342887 CACNA1FO60840 1977 aa10.85□□□□□ -0.67
CFAP54-201ENST00000342887 BCANQ96GW7 911 aa10.85□□□□□ -0.67
CFAP54-201ENST00000342887 SLC52A1Q9NWF4 448 aa10.85□□□□□ -0.67
CFAP54-201ENST00000342887 ADAMTSL3P82987 1691 aa10.84□□□□□ -0.67
CFAP54-201ENST00000342887 TRPM3Q9HCF6 1732 aaPredicted RBP10.84□□□□□ -0.67
CFAP54-201ENST00000342887 B4GALNT3Q6L9W6 998 aa10.84□□□□□ -0.67
CFAP54-201ENST00000342887 BRPF1P55201 1214 aaPredicted RBP10.83□□□□□ -0.67
CFAP54-201ENST00000342887 BACH2Q9BYV9 841 aa10.83□□□□□ -0.67
CFAP54-201ENST00000342887 RGL3Q3MIN7 710 aa10.83□□□□□ -0.68
CFAP54-201ENST00000342887 EXOC6Q8TAG9 804 aa10.82□□□□□ -0.68
CFAP54-201ENST00000342887 OVOS2A0A0J9YW53 1432 aa10.82□□□□□ -0.68
CFAP54-201ENST00000342887 PTCH1Q13635 1447 aa10.82□□□□□ -0.68
CFAP54-201ENST00000342887 OVOS2Q6IE36 1432 aa10.82□□□□□ -0.68
CFAP54-201ENST00000342887 USP19O94966 1318 aa10.82□□□□□ -0.68
CFAP54-201ENST00000342887 MST1RQ04912 1400 aa10.81□□□□□ -0.68
CFAP54-201ENST00000342887 TCERG1O14776 1098 aaKnown RBP10.81□□□□□ -0.68
CFAP54-201ENST00000342887 IRX6P78412 446 aaPredicted RBP10.81□□□□□ -0.68
CFAP54-201ENST00000342887 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.81□□□□□ -0.68
CFAP54-201ENST00000342887 ATAD2Q6PL18 1390 aa10.8□□□□□ -0.68
CFAP54-201ENST00000342887 NCAPD2Q15021 1401 aa10.8□□□□□ -0.68
CFAP54-201ENST00000342887 C20orf194Q5TEA3 1177 aa10.79□□□□□ -0.68
CFAP54-201ENST00000342887 LTN1O94822 1766 aa10.79□□□□□ -0.68
CFAP54-201ENST00000342887 ABCC6O95255 1503 aa10.79□□□□□ -0.68
CFAP54-201ENST00000342887 ZNF326Q5BKZ1 582 aaKnown RBP10.79□□□□□ -0.68
CFAP54-201ENST00000342887 UBE2Q2Q8WVN8 375 aa10.79□□□□□ -0.68
CFAP54-201ENST00000342887 EDC4Q6P2E9 1401 aaKnown RBP10.79□□□□□ -0.68
CFAP54-201ENST00000342887 C8orf34Q49A92 452 aa10.79□□□□□ -0.68
CFAP54-201ENST00000342887 IL16Q14005 1332 aa10.78□□□□□ -0.68
CFAP54-201ENST00000342887 IDI1Q13907 227 aa10.78□□□□□ -0.68
CFAP54-201ENST00000342887 WDR63Q8IWG1 891 aa10.78□□□□□ -0.68
CFAP54-201ENST00000342887 AAMPQ13685 434 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms