RNA–Protein interactions for RNA: ENST00000342628.6

FOXM1-201, Transcript of forkhead box M1, humanhuman

TSL 1 (best) BASIC

Gene FOXM1, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXM1-201ENST00000342628 NKTRP30414 1462 aaKnown RBP11.43□□□□□ -0.58
FOXM1-201ENST00000342628 NWD1Q149M9 1564 aa11.42□□□□□ -0.58
FOXM1-201ENST00000342628 POLR3GLQ9BT43 218 aa11.42□□□□□ -0.58
FOXM1-201ENST00000342628 EVC2Q86UK5 1308 aa11.42□□□□□ -0.58
FOXM1-201ENST00000342628 QRICH2Q9H0J4 1663 aa11.41□□□□□ -0.58
FOXM1-201ENST00000342628 PLEKHH1Q9ULM0 1364 aa11.41□□□□□ -0.58
FOXM1-201ENST00000342628 SBNO2Q9Y2G9 1366 aa11.41□□□□□ -0.58
FOXM1-201ENST00000342628 SRPK2P78362 688 aaKnown RBP11.4□□□□□ -0.59
FOXM1-201ENST00000342628 TESK2Q96S53 571 aa11.4□□□□□ -0.59
FOXM1-201ENST00000342628 RBM33Q96EV2 1170 aaKnown RBP11.39□□□□□ -0.59
FOXM1-201ENST00000342628 TMEM94Q12767 1356 aa11.38□□□□□ -0.59
FOXM1-201ENST00000342628 NCOA3Q9Y6Q9 1424 aa11.38□□□□□ -0.59
FOXM1-201ENST00000342628 STRCP1A6NGW2 1772 aa11.37□□□□□ -0.59
FOXM1-201ENST00000342628 WASLO00401 505 aaPredicted RBP11.37□□□□□ -0.59
FOXM1-201ENST00000342628 CDK19Q9BWU1 502 aa11.37□□□□□ -0.59
FOXM1-201ENST00000342628 C19orf44Q9H6X5 657 aa11.37□□□□□ -0.59
FOXM1-201ENST00000342628 PRKCSHP14314 528 aaPredicted RBP11.37□□□□□ -0.59
FOXM1-201ENST00000342628 ATF3P18847 181 aa11.37□□□□□ -0.59
FOXM1-201ENST00000342628 MSH6P52701 1360 aa11.37□□□□□ -0.59
FOXM1-201ENST00000342628 ADGRL3Q9HAR2 1447 aa11.36□□□□□ -0.59
FOXM1-201ENST00000342628 PUS7Q96PZ0 661 aaKnown RBP11.35□□□□□ -0.59
FOXM1-201ENST00000342628 CABP2Q9NPB3 220 aa11.35□□□□□ -0.59
FOXM1-201ENST00000342628 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.35□□□□□ -0.59
FOXM1-201ENST00000342628 LRRC7Q96NW7 1537 aa11.35□□□□□ -0.59
FOXM1-201ENST00000342628 DISP3Q9P2K9 1392 aa11.35□□□□□ -0.59
FOXM1-201ENST00000342628 CADPS2Q86UW7 1296 aa11.34□□□□□ -0.59
FOXM1-201ENST00000342628 TMC1Q8TDI8 760 aa11.34□□□□□ -0.59
FOXM1-201ENST00000342628 ATAD2Q6PL18 1390 aa11.34□□□□□ -0.59
FOXM1-201ENST00000342628 NUTM2FA1L443 756 aa11.34□□□□□ -0.59
FOXM1-201ENST00000342628 KIF7Q2M1P5 1343 aa11.34□□□□□ -0.59
FOXM1-201ENST00000342628 CCDC7Q96M83 1385 aa11.34□□□□□ -0.59
FOXM1-201ENST00000342628 ADGRB2O60241 1585 aa11.33□□□□□ -0.6
FOXM1-201ENST00000342628 C11orf95C9JLR9 678 aaPredicted RBP11.33□□□□□ -0.6
FOXM1-201ENST00000342628 NUDT16Q96DE0 195 aaKnown RBP11.33□□□□□ -0.6
FOXM1-201ENST00000342628 TULP4Q9NRJ4 1543 aa11.33□□□□□ -0.6
FOXM1-201ENST00000342628 NALCNQ8IZF0 1738 aa11.33□□□□□ -0.6
FOXM1-201ENST00000342628 WASHC2AQ641Q2 1341 aa11.32□□□□□ -0.6
FOXM1-201ENST00000342628 CCDC61Q9Y6R9 512 aa11.32□□□□□ -0.6
FOXM1-201ENST00000342628 LTBP4Q8N2S1 1624 aa11.31□□□□□ -0.6
FOXM1-201ENST00000342628 CDC42BPGQ6DT37 1551 aa11.31□□□□□ -0.6
FOXM1-201ENST00000342628 DCCP43146 1447 aa11.31□□□□□ -0.6
FOXM1-201ENST00000342628 NINLQ9Y2I6 1382 aa11.3□□□□□ -0.6
FOXM1-201ENST00000342628 XIRP1Q702N8 1843 aaKnown RBP11.29□□□□□ -0.6
FOXM1-201ENST00000342628 DDX10Q13206 875 aaKnown RBP11.29□□□□□ -0.6
FOXM1-201ENST00000342628 ANKARQ7Z5J8 1434 aa11.29□□□□□ -0.6
FOXM1-201ENST00000342628 HDGFL2Q7Z4V5 671 aaPredicted RBP11.29□□□□□ -0.6
FOXM1-201ENST00000342628 TERF2IPQ9NYB0 399 aa11.29□□□□□ -0.6
FOXM1-201ENST00000342628 FMN2Q9NZ56 1722 aa11.29□□□□□ -0.6
FOXM1-201ENST00000342628 ESCO1Q5FWF5 840 aa11.29□□□□□ -0.6
FOXM1-201ENST00000342628 CABP1Q9NZU7 370 aa11.28□□□□□ -0.6
FOXM1-201ENST00000342628 NGDNQ8NEJ9 315 aaKnown RBP11.28□□□□□ -0.6
FOXM1-201ENST00000342628 SLC12A5Q9H2X9 1139 aa11.28□□□□□ -0.6
FOXM1-201ENST00000342628 TOM1O60784 492 aa11.28□□□□□ -0.6
FOXM1-201ENST00000342628 CERKQ8TCT0 537 aa11.28□□□□□ -0.6
FOXM1-201ENST00000342628 ITSN1Q15811 1721 aa11.27□□□□□ -0.6
FOXM1-201ENST00000342628 PPIP5K1Q6PFW1 1433 aa11.27□□□□□ -0.6
FOXM1-201ENST00000342628 PRR36Q9H6K5 1346 aa11.27□□□□□ -0.61
FOXM1-201ENST00000342628 SLAIN2Q9P270 581 aa11.27□□□□□ -0.61
FOXM1-201ENST00000342628 PHF8Q9UPP1 1060 aa11.27□□□□□ -0.61
FOXM1-201ENST00000342628 PMFBP1Q8TBY8 1022 aa11.26□□□□□ -0.61
FOXM1-201ENST00000342628 ATP7BP35670 1465 aa11.26□□□□□ -0.61
FOXM1-201ENST00000342628 ZNF692Q9BU19 519 aaPredicted RBP11.26□□□□□ -0.61
FOXM1-201ENST00000342628 PANK3Q9H999 370 aa11.26□□□□□ -0.61
FOXM1-201ENST00000342628 RGPD8O14715 1765 aaPredicted RBP11.25□□□□□ -0.61
FOXM1-201ENST00000342628 PLEKHG3A1L390 1219 aa11.25□□□□□ -0.61
FOXM1-201ENST00000342628 C1orf167Q5SNV9 1468 aa11.25□□□□□ -0.61
FOXM1-201ENST00000342628 MST1RQ04912 1400 aa11.25□□□□□ -0.61
FOXM1-201ENST00000342628 IQSEC2Q5JU85 1478 aa11.25□□□□□ -0.61
FOXM1-201ENST00000342628 UBAP1LF5GYI3 381 aa11.24□□□□□ -0.61
FOXM1-201ENST00000342628 KNSTRNQ9Y448 316 aa11.24□□□□□ -0.61
FOXM1-201ENST00000342628 ORAI2Q96SN7 254 aa11.24□□□□□ -0.61
FOXM1-201ENST00000342628 ACEP12821 1306 aa11.24□□□□□ -0.61
FOXM1-201ENST00000342628 PSME1Q06323 249 aa11.23□□□□□ -0.61
FOXM1-201ENST00000342628 ERICH6Q7L0X2 663 aa11.23□□□□□ -0.61
FOXM1-201ENST00000342628 SCAF1Q9H7N4 1312 aaKnown RBP11.23□□□□□ -0.61
FOXM1-201ENST00000342628 ANKRD36BQ8N2N9 1353 aa11.23□□□□□ -0.61
FOXM1-201ENST00000342628 USP32Q8NFA0 1604 aa11.23□□□□□ -0.61
FOXM1-201ENST00000342628 KTN1Q86UP2 1357 aaKnown RBP11.22□□□□□ -0.61
FOXM1-201ENST00000342628 FOXO3O43524 673 aa11.22□□□□□ -0.61
FOXM1-201ENST00000342628 MYOM1P52179 1685 aa11.22□□□□□ -0.61
FOXM1-201ENST00000342628 TOPAZ1Q8N9V7 1692 aa11.22□□□□□ -0.61
FOXM1-201ENST00000342628 KIF1AQ12756 1690 aa11.21□□□□□ -0.61
FOXM1-201ENST00000342628 NPHP3Q7Z494 1330 aa11.21□□□□□ -0.61
FOXM1-201ENST00000342628 PIP4K2BP78356 416 aa11.21□□□□□ -0.62
FOXM1-201ENST00000342628 A0A1W2PP64 1363 aa11.21□□□□□ -0.62
FOXM1-201ENST00000342628 PAK3O75914 559 aaPredicted RBP11.2□□□□□ -0.62
FOXM1-201ENST00000342628 DIEXFQ68CQ4 756 aaKnown RBP11.2□□□□□ -0.62
FOXM1-201ENST00000342628 BRINP3Q76B58 766 aa11.2□□□□□ -0.62
FOXM1-201ENST00000342628 POLR3AO14802 1390 aaPredicted RBP11.2□□□□□ -0.62
FOXM1-201ENST00000342628 KRT28Q7Z3Y7 464 aa11.19□□□□□ -0.62
FOXM1-201ENST00000342628 CGNL1Q0VF96 1302 aa11.19□□□□□ -0.62
FOXM1-201ENST00000342628 NSD3Q9BZ95 1437 aa11.19□□□□□ -0.62
FOXM1-201ENST00000342628 CNGB1Q14028 1251 aaPredicted RBP11.19□□□□□ -0.62
FOXM1-201ENST00000342628 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.19□□□□□ -0.62
FOXM1-201ENST00000342628 CPSF1Q10570 1443 aaKnown RBP11.18□□□□□ -0.62
FOXM1-201ENST00000342628 BRD4O60885 1362 aaPredicted RBP11.18□□□□□ -0.62
FOXM1-201ENST00000342628 EDC4Q6P2E9 1401 aaKnown RBP11.18□□□□□ -0.62
FOXM1-201ENST00000342628 AKAP12Q02952 1782 aa11.18□□□□□ -0.62
FOXM1-201ENST00000342628 LMOD2Q6P5Q4 547 aa11.18□□□□□ -0.62
FOXM1-201ENST00000342628 CARD14Q9BXL6 1004 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms