RNA–Protein interactions for RNA: ENST00000342084.8

PTPRR-202, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRR, Length 2,037 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-202ENST00000342084 IGHDP01880 384 aa9.46□□□□□ -0.89
PTPRR-202ENST00000342084 PANK1Q8TE04 598 aa9.46□□□□□ -0.89
PTPRR-202ENST00000342084 MYO3AQ8NEV4 1616 aa9.46□□□□□ -0.89
PTPRR-202ENST00000342084 NPATQ14207 1427 aa9.46□□□□□ -0.9
PTPRR-202ENST00000342084 POGZQ7Z3K3 1410 aa9.46□□□□□ -0.9
PTPRR-202ENST00000342084 NPM3O75607 178 aaKnown RBP9.46□□□□□ -0.9
PTPRR-202ENST00000342084 TNNQ9UQP3 1299 aa9.46□□□□□ -0.9
PTPRR-202ENST00000342084 COG6Q9Y2V7 657 aa9.46□□□□□ -0.9
PTPRR-202ENST00000342084 QRICH2Q9H0J4 1663 aa9.46□□□□□ -0.9
PTPRR-202ENST00000342084 FRMPD1Q5SYB0 1578 aa9.45□□□□□ -0.9
PTPRR-202ENST00000342084 SHPRHQ149N8 1683 aa9.45□□□□□ -0.9
PTPRR-202ENST00000342084 WWC1Q8IX03 1113 aa9.45□□□□□ -0.9
PTPRR-202ENST00000342084 FRAT1Q92837 279 aaPredicted RBP9.45□□□□□ -0.9
PTPRR-202ENST00000342084 HECW2Q9P2P5 1572 aa9.45□□□□□ -0.9
PTPRR-202ENST00000342084 MLH3Q9UHC1 1453 aa9.45□□□□□ -0.9
PTPRR-202ENST00000342084 CANXP27824 592 aaKnown RBP9.44□□□□□ -0.9
PTPRR-202ENST00000342084 SAFB2Q14151 953 aaKnown RBP eCLIP9.44□□□□□ -0.9
PTPRR-202ENST00000342084 FAM161AQ3B820 660 aa9.44□□□□□ -0.9
PTPRR-202ENST00000342084 BCL2L13Q9BXK5 485 aa9.44□□□□□ -0.9
PTPRR-202ENST00000342084 CD109Q6YHK3 1445 aa9.44□□□□□ -0.9
PTPRR-202ENST00000342084 ZC3H13Q5T200 1668 aaKnown RBP9.44□□□□□ -0.9
PTPRR-202ENST00000342084 DDRGK1Q96HY6 314 aa9.44□□□□□ -0.9
PTPRR-202ENST00000342084 POLR3AO14802 1390 aaPredicted RBP9.43□□□□□ -0.9
PTPRR-202ENST00000342084 ADGRB1O14514 1584 aa9.43□□□□□ -0.9
PTPRR-202ENST00000342084 DAXXQ9UER7 740 aaPredicted RBP9.43□□□□□ -0.9
PTPRR-202ENST00000342084 PPLO60437 1756 aa9.43□□□□□ -0.9
PTPRR-202ENST00000342084 TCP11L2Q8N4U5 519 aa9.43□□□□□ -0.9
PTPRR-202ENST00000342084 C14orf93Q9H972 538 aaKnown RBP9.43□□□□□ -0.9
PTPRR-202ENST00000342084 NEO1Q92859 1461 aa9.42□□□□□ -0.9
PTPRR-202ENST00000342084 NPM1P06748 294 aaKnown RBP eCLIP9.42□□□□□ -0.9
PTPRR-202ENST00000342084 MTHFSP49914 203 aa9.42□□□□□ -0.9
PTPRR-202ENST00000342084 SETBP1Q9Y6X0 1596 aa9.42□□□□□ -0.9
PTPRR-202ENST00000342084 SBNO2Q9Y2G9 1366 aa9.42□□□□□ -0.9
PTPRR-202ENST00000342084 CABP2Q9NPB3 220 aa9.41□□□□□ -0.9
PTPRR-202ENST00000342084 IQSEC2Q5JU85 1478 aa9.41□□□□□ -0.9
PTPRR-202ENST00000342084 SIGLEC1Q9BZZ2 1709 aa9.41□□□□□ -0.9
PTPRR-202ENST00000342084 PPM1GO15355 546 aaPredicted RBP9.41□□□□□ -0.9
PTPRR-202ENST00000342084 RAPGEF3O95398 923 aa9.41□□□□□ -0.9
PTPRR-202ENST00000342084 RLBP1P12271 317 aa9.41□□□□□ -0.9
PTPRR-202ENST00000342084 RUNDC1Q96C34 613 aa9.41□□□□□ -0.9
PTPRR-202ENST00000342084 GLI2P10070 1586 aa9.4□□□□□ -0.9
PTPRR-202ENST00000342084 ABCC3O15438 1527 aa9.4□□□□□ -0.9
PTPRR-202ENST00000342084 TULP4Q9NRJ4 1543 aa9.4□□□□□ -0.9
PTPRR-202ENST00000342084 SEC24BO95487 1268 aa9.4□□□□□ -0.9
PTPRR-202ENST00000342084 CLUAP1Q96AJ1 413 aa9.4□□□□□ -0.9
PTPRR-202ENST00000342084 STK26Q9P289 416 aa9.4□□□□□ -0.9
PTPRR-202ENST00000342084 RARSP54136 660 aaKnown RBP9.39□□□□□ -0.91
PTPRR-202ENST00000342084 IL27Q8NEV9 243 aa9.39□□□□□ -0.91
PTPRR-202ENST00000342084 NFKBIBQ15653 356 aa9.39□□□□□ -0.91
PTPRR-202ENST00000342084 RICTORQ6R327 1708 aa9.39□□□□□ -0.91
PTPRR-202ENST00000342084 CGNL1Q0VF96 1302 aa9.38□□□□□ -0.91
PTPRR-202ENST00000342084 DIP2CQ9Y2E4 1556 aa9.38□□□□□ -0.91
PTPRR-202ENST00000342084 U2AF1L5P0DN76 240 aaPredicted RBP9.38□□□□□ -0.91
PTPRR-202ENST00000342084 U2AF1Q01081 240 aaKnown RBP eCLIP9.38□□□□□ -0.91
PTPRR-202ENST00000342084 PDE3AQ14432 1141 aa9.38□□□□□ -0.91
PTPRR-202ENST00000342084 PCDHB15Q9Y5E8 787 aa9.38□□□□□ -0.91
PTPRR-202ENST00000342084 CAMSAP1Q5T5Y3 1602 aa9.38□□□□□ -0.91
PTPRR-202ENST00000342084 USP19O94966 1318 aa9.37□□□□□ -0.91
PTPRR-202ENST00000342084 ARHGEF28Q8N1W1 1705 aaKnown RBP9.37□□□□□ -0.91
PTPRR-202ENST00000342084 NEXMIFQ5QGS0 1516 aa9.37□□□□□ -0.91
PTPRR-202ENST00000342084 TSR2Q969E8 191 aaKnown RBP9.37□□□□□ -0.91
PTPRR-202ENST00000342084 GGNBP2Q9H3C7 697 aa9.37□□□□□ -0.91
PTPRR-202ENST00000342084 USP35Q9P2H5 1018 aa9.37□□□□□ -0.91
PTPRR-202ENST00000342084 TAOK2Q9UL54 1235 aa9.37□□□□□ -0.91
PTPRR-202ENST00000342084 U2SURPO15042 1029 aaKnown RBP9.36□□□□□ -0.91
PTPRR-202ENST00000342084 CFAP53Q96M91 514 aa9.36□□□□□ -0.91
PTPRR-202ENST00000342084 EVC2Q86UK5 1308 aa9.36□□□□□ -0.91
PTPRR-202ENST00000342084 NGEFQ8N5V2 710 aa9.36□□□□□ -0.91
PTPRR-202ENST00000342084 ANKRD36BQ8N2N9 1353 aa9.35□□□□□ -0.91
PTPRR-202ENST00000342084 PIK3C2BO00750 1634 aa9.35□□□□□ -0.91
PTPRR-202ENST00000342084 USP32Q8NFA0 1604 aa9.35□□□□□ -0.91
PTPRR-202ENST00000342084 SRPK2P78362 688 aaKnown RBP9.35□□□□□ -0.91
PTPRR-202ENST00000342084 IDI1Q13907 227 aa9.35□□□□□ -0.91
PTPRR-202ENST00000342084 MINK1Q8N4C8 1332 aaPredicted RBP9.35□□□□□ -0.91
PTPRR-202ENST00000342084 A0A1W2PP64 1363 aa9.35□□□□□ -0.91
PTPRR-202ENST00000342084 FRAT2O75474 233 aaPredicted RBP9.34□□□□□ -0.91
PTPRR-202ENST00000342084 WDR63Q8IWG1 891 aa9.34□□□□□ -0.91
PTPRR-202ENST00000342084 RPGRIP1LQ68CZ1 1315 aa9.34□□□□□ -0.91
PTPRR-202ENST00000342084 NINLQ9Y2I6 1382 aa9.34□□□□□ -0.91
PTPRR-202ENST00000342084 VIRMAQ69YN4 1812 aaKnown RBP9.34□□□□□ -0.91
PTPRR-202ENST00000342084 PDZRN3Q9UPQ7 1066 aa9.34□□□□□ -0.91
PTPRR-202ENST00000342084 YEATS2Q9ULM3 1422 aa9.33□□□□□ -0.92
PTPRR-202ENST00000342084 NLRP1Q9C000 1473 aa9.33□□□□□ -0.92
PTPRR-202ENST00000342084 VGFO15240 615 aaPredicted RBP9.32□□□□□ -0.92
PTPRR-202ENST00000342084 MAPK8IP3Q9UPT6 1336 aa9.32□□□□□ -0.92
PTPRR-202ENST00000342084 RIMBP3CA6NJZ7 1639 aa9.32□□□□□ -0.92
PTPRR-202ENST00000342084 RIMBP3BA6NNM3 1639 aa9.32□□□□□ -0.92
PTPRR-202ENST00000342084 RIMBP3Q9UFD9 1639 aa9.32□□□□□ -0.92
PTPRR-202ENST00000342084 MYO5BQ9ULV0 1848 aa9.32□□□□□ -0.92
PTPRR-202ENST00000342084 FBLN1P23142 703 aa9.32□□□□□ -0.92
PTPRR-202ENST00000342084 PLCB2Q00722 1185 aa9.32□□□□□ -0.92
PTPRR-202ENST00000342084 EXOSC9Q06265 439 aaKnown RBP9.32□□□□□ -0.92
PTPRR-202ENST00000342084 GSE1Q14687 1217 aa9.32□□□□□ -0.92
PTPRR-202ENST00000342084 CCDC27Q2M243 656 aa9.32□□□□□ -0.92
PTPRR-202ENST00000342084 PRAM1Q96QH2 718 aa9.32□□□□□ -0.92
PTPRR-202ENST00000342084 MYH16Q9H6N6 1097 aa9.32□□□□□ -0.92
PTPRR-202ENST00000342084 BRPF3Q9ULD4 1205 aa9.32□□□□□ -0.92
PTPRR-202ENST00000342084 ARHGAP31Q2M1Z3 1444 aa9.32□□□□□ -0.92
PTPRR-202ENST00000342084 ADGRB2O60241 1585 aa9.32□□□□□ -0.92
PTPRR-202ENST00000342084 FBXO31Q5XUX0 539 aaPredicted RBP9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms