RNA–Protein interactions for RNA: ENST00000341400.11

NPIPB4-202, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 2

Gene NPIPB4, Length 767 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-202ENST00000341400 FAM98CQ17RN3 349 aaKnown RBP11.54□□□□□ -0.56
NPIPB4-202ENST00000341400 HDGFL1Q5TGJ6 251 aa11.54□□□□□ -0.56
NPIPB4-202ENST00000341400 C6orf229H3BNL8 230 aa11.53□□□□□ -0.56
NPIPB4-202ENST00000341400 AEBP1Q8IUX7 1158 aa11.53□□□□□ -0.56
NPIPB4-202ENST00000341400 PDE4CQ08493 712 aa11.52□□□□□ -0.57
NPIPB4-202ENST00000341400 FUT2Q10981 343 aa11.52□□□□□ -0.57
NPIPB4-202ENST00000341400 LRRN4Q8WUT4 740 aa11.52□□□□□ -0.57
NPIPB4-202ENST00000341400 CFAP99D6REC4 459 aa11.51□□□□□ -0.57
NPIPB4-202ENST00000341400 CFHP08603 1231 aa11.51□□□□□ -0.57
NPIPB4-202ENST00000341400 NPM2Q86SE8 214 aaKnown RBP11.5□□□□□ -0.57
NPIPB4-202ENST00000341400 ADAMTS19Q8TE59 1207 aa11.5□□□□□ -0.57
NPIPB4-202ENST00000341400 GPR37L1O60883 481 aa11.49□□□□□ -0.57
NPIPB4-202ENST00000341400 ATP6V1AP38606 617 aa11.49□□□□□ -0.57
NPIPB4-202ENST00000341400 VAC14Q08AM6 782 aa11.49□□□□□ -0.57
NPIPB4-202ENST00000341400 SAMD7Q7Z3H4 446 aa11.49□□□□□ -0.57
NPIPB4-202ENST00000341400 PBXIP1Q96AQ6 731 aa11.49□□□□□ -0.57
NPIPB4-202ENST00000341400 DMRTA1Q5VZB9 504 aa11.48□□□□□ -0.57
NPIPB4-202ENST00000341400 ERBB3P21860 1342 aa11.48□□□□□ -0.57
NPIPB4-202ENST00000341400 VARS2Q5ST30 1063 aaKnown RBP11.47□□□□□ -0.57
NPIPB4-202ENST00000341400 LAPTM4BQ86VI4 370 aa11.47□□□□□ -0.57
NPIPB4-202ENST00000341400 RNF40O75150 1001 aa11.46□□□□□ -0.57
NPIPB4-202ENST00000341400 POTEEQ6S8J3 1075 aa11.46□□□□□ -0.57
NPIPB4-202ENST00000341400 PRR7Q8TB68 274 aa11.46□□□□□ -0.57
NPIPB4-202ENST00000341400 RFX1P22670 979 aa11.45□□□□□ -0.58
NPIPB4-202ENST00000341400 PBX2P40425 430 aa11.45□□□□□ -0.58
NPIPB4-202ENST00000341400 KMT5BQ4FZB7 885 aa11.45□□□□□ -0.58
NPIPB4-202ENST00000341400 EPS8L1Q8TE68 723 aa11.45□□□□□ -0.58
NPIPB4-202ENST00000341400 VPS9D1Q9Y2B5 631 aa11.45□□□□□ -0.58
NPIPB4-202ENST00000341400 AXIN2Q9Y2T1 843 aa11.45□□□□□ -0.58
NPIPB4-202ENST00000341400 CFAP70Q5T0N1 1121 aa11.44□□□□□ -0.58
NPIPB4-202ENST00000341400 SYMPKQ92797 1274 aaKnown RBP11.44□□□□□ -0.58
NPIPB4-202ENST00000341400 PPP1R12CQ9BZL4 782 aa11.44□□□□□ -0.58
NPIPB4-202ENST00000341400 NBPF3Q9H094 633 aa11.44□□□□□ -0.58
NPIPB4-202ENST00000341400 ALG2Q9H553 416 aa11.44□□□□□ -0.58
NPIPB4-202ENST00000341400 SOX11P35716 441 aa11.43□□□□□ -0.58
NPIPB4-202ENST00000341400 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.42□□□□□ -0.58
NPIPB4-202ENST00000341400 RETREG3Q86VR2 466 aa11.42□□□□□ -0.58
NPIPB4-202ENST00000341400 NR6A1Q15406 480 aa11.41□□□□□ -0.58
NPIPB4-202ENST00000341400 PNMA1Q8ND90 353 aa11.41□□□□□ -0.58
NPIPB4-202ENST00000341400 Q3C1V9 767 aa11.4□□□□□ -0.58
NPIPB4-202ENST00000341400 PALM3A6NDB9 673 aaPredicted RBP11.39□□□□□ -0.59
NPIPB4-202ENST00000341400 PER1O15534 1290 aaPredicted RBP11.39□□□□□ -0.59
NPIPB4-202ENST00000341400 CSB-PGBD3P0DP91 1061 aa11.39□□□□□ -0.59
NPIPB4-202ENST00000341400 MORN1Q5T089 497 aa11.39□□□□□ -0.59
NPIPB4-202ENST00000341400 ZFRQ96KR1 1074 aaKnown RBP11.39□□□□□ -0.59
NPIPB4-202ENST00000341400 USTQ9Y2C2 406 aa11.39□□□□□ -0.59
NPIPB4-202ENST00000341400 PATL2C9JE40 543 aaKnown RBP11.38□□□□□ -0.59
NPIPB4-202ENST00000341400 SRPK2P78362 688 aaKnown RBP11.38□□□□□ -0.59
NPIPB4-202ENST00000341400 SEMA3FQ13275 785 aa11.38□□□□□ -0.59
NPIPB4-202ENST00000341400 DESI1Q6ICB0 168 aa11.38□□□□□ -0.59
NPIPB4-202ENST00000341400 BHMG1C9JSJ3 638 aaPredicted RBP11.37□□□□□ -0.59
NPIPB4-202ENST00000341400 ACTN4O43707 911 aaKnown RBP11.37□□□□□ -0.59
NPIPB4-202ENST00000341400 LMOD1P29536 600 aaPredicted RBP11.37□□□□□ -0.59
NPIPB4-202ENST00000341400 PUS10Q3MIT2 529 aaKnown RBP11.36□□□□□ -0.59
NPIPB4-202ENST00000341400 OTUD5Q96G74 571 aa11.36□□□□□ -0.59
NPIPB4-202ENST00000341400 UCN2Q96RP3 112 aa11.36□□□□□ -0.59
NPIPB4-202ENST00000341400 GZF1Q9H116 711 aaPredicted RBP11.36□□□□□ -0.59
NPIPB4-202ENST00000341400 TFIP11Q9UBB9 837 aaKnown RBP11.36□□□□□ -0.59
NPIPB4-202ENST00000341400 SLC27A5Q9Y2P5 690 aa11.36□□□□□ -0.59
NPIPB4-202ENST00000341400 EIF4G2P78344 907 aaKnown RBP eCLIP11.35□□□□□ -0.59
NPIPB4-202ENST00000341400 ZNF687Q8N1G0 1237 aa11.35□□□□□ -0.59
NPIPB4-202ENST00000341400 MRPL50Q8N5N7 158 aaKnown RBP11.35□□□□□ -0.59
NPIPB4-202ENST00000341400 LRCH3Q96II8 777 aa11.35□□□□□ -0.59
NPIPB4-202ENST00000341400 PRR14Q9BWN1 585 aa11.35□□□□□ -0.59
NPIPB4-202ENST00000341400 EMP3P54852 163 aa11.34□□□□□ -0.59
NPIPB4-202ENST00000341400 TMCO4Q5TGY1 634 aa11.34□□□□□ -0.59
NPIPB4-202ENST00000341400 LYPD8Q6UX82 237 aa11.34□□□□□ -0.59
NPIPB4-202ENST00000341400 TK2O00142 265 aa11.33□□□□□ -0.6
NPIPB4-202ENST00000341400 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.33□□□□□ -0.6
NPIPB4-202ENST00000341400 BRD1O95696 1058 aa11.32□□□□□ -0.6
NPIPB4-202ENST00000341400 KCNA1Q09470 495 aa11.32□□□□□ -0.6
NPIPB4-202ENST00000341400 NR1H3Q13133 447 aa11.31□□□□□ -0.6
NPIPB4-202ENST00000341400 USB1Q9BQ65 265 aaKnown RBP11.3□□□□□ -0.6
NPIPB4-202ENST00000341400 MAFBQ9Y5Q3 323 aaPredicted RBP11.3□□□□□ -0.6
NPIPB4-202ENST00000341400 ATG7O95352 703 aa11.29□□□□□ -0.6
NPIPB4-202ENST00000341400 RNF19BQ6ZMZ0 732 aa11.29□□□□□ -0.6
NPIPB4-202ENST00000341400 ST18O60284 1047 aa11.28□□□□□ -0.6
NPIPB4-202ENST00000341400 BLOC1S3Q6QNY0 202 aa11.28□□□□□ -0.6
NPIPB4-202ENST00000341400 TBC1D9Q6ZT07 1266 aa11.28□□□□□ -0.6
NPIPB4-202ENST00000341400 SALL2Q9Y467 1007 aaPredicted RBP11.28□□□□□ -0.6
NPIPB4-202ENST00000341400 FAM205CA6NFA0 338 aa11.27□□□□□ -0.61
NPIPB4-202ENST00000341400 ATP9BO43861 1147 aa11.27□□□□□ -0.61
NPIPB4-202ENST00000341400 CDCA8Q53HL2 280 aa11.27□□□□□ -0.61
NPIPB4-202ENST00000341400 ZBBXA8MT70 800 aa11.26□□□□□ -0.61
NPIPB4-202ENST00000341400 MFAP1P55081 439 aaKnown RBP11.26□□□□□ -0.61
NPIPB4-202ENST00000341400 BRICD5Q6PL45 260 aa11.26□□□□□ -0.61
NPIPB4-202ENST00000341400 MARVELD3Q96A59 401 aa11.26□□□□□ -0.61
NPIPB4-202ENST00000341400 FKBPLQ9UIM3 349 aa11.26□□□□□ -0.61
NPIPB4-202ENST00000341400 FBXO45P0C2W1 286 aa11.25□□□□□ -0.61
NPIPB4-202ENST00000341400 ANKK1Q8NFD2 765 aa11.25□□□□□ -0.61
NPIPB4-202ENST00000341400 CARNS1A5YM72 827 aa11.24□□□□□ -0.61
NPIPB4-202ENST00000341400 FMNL1O95466 1100 aaPredicted RBP11.24□□□□□ -0.61
NPIPB4-202ENST00000341400 PPP4CP60510 307 aa11.24□□□□□ -0.61
NPIPB4-202ENST00000341400 ADGRD1Q6QNK2 874 aa11.24□□□□□ -0.61
NPIPB4-202ENST00000341400 ZC3H4Q9UPT8 1303 aaKnown RBP11.24□□□□□ -0.61
NPIPB4-202ENST00000341400 F12P00748 615 aaPredicted RBP11.23□□□□□ -0.61
NPIPB4-202ENST00000341400 SCUBE3Q8IX30 993 aa11.23□□□□□ -0.61
NPIPB4-202ENST00000341400 RGS22Q8NE09 1264 aa11.23□□□□□ -0.61
NPIPB4-202ENST00000341400 VRTNQ9H8Y1 702 aa11.23□□□□□ -0.61
NPIPB4-202ENST00000341400 GOLGA8CPA6NN73 597 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms