RNA–Protein interactions for RNA: ENST00000340748.8

DNMT1-201, Transcript of DNA methyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DNMT1, Length 5,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-201ENST00000340748 EXOC6Q8TAG9 804 aa15.89■□□□□ 0.14
DNMT1-201ENST00000340748 HMGB2P26583 209 aaKnown RBP15.89■□□□□ 0.13
DNMT1-201ENST00000340748 PDE4AP27815 886 aa15.89■□□□□ 0.13
DNMT1-201ENST00000340748 CRBNQ96SW2 442 aa15.89■□□□□ 0.13
DNMT1-201ENST00000340748 LRPPRCP42704 1394 aaKnown RBP15.89■□□□□ 0.13
DNMT1-201ENST00000340748 KIAA2012Q0VF49 1180 aa15.88■□□□□ 0.13
DNMT1-201ENST00000340748 FOXO3O43524 673 aa15.88■□□□□ 0.13
DNMT1-201ENST00000340748 GZF1Q9H116 711 aaPredicted RBP15.88■□□□□ 0.13
DNMT1-201ENST00000340748 C8orf37Q96NL8 207 aa15.87■□□□□ 0.13
DNMT1-201ENST00000340748 ZNF692Q9BU19 519 aaPredicted RBP15.87■□□□□ 0.13
DNMT1-201ENST00000340748 APAF1O14727 1248 aa15.87■□□□□ 0.13
DNMT1-201ENST00000340748 NEXNQ0ZGT2 675 aa15.86■□□□□ 0.13
DNMT1-201ENST00000340748 PLIN1O60240 522 aa15.86■□□□□ 0.13
DNMT1-201ENST00000340748 PLEKHO1Q53GL0 409 aaPredicted RBP15.86■□□□□ 0.13
DNMT1-201ENST00000340748 DDX19BQ9UMR2 479 aa15.85■□□□□ 0.13
DNMT1-201ENST00000340748 UHRF1BP1Q6BDS2 1440 aa15.85■□□□□ 0.13
DNMT1-201ENST00000340748 HSP90B1P14625 803 aaKnown RBP15.85■□□□□ 0.13
DNMT1-201ENST00000340748 IDI1Q13907 227 aa15.85■□□□□ 0.13
DNMT1-201ENST00000340748 CABP1Q9NZU7 370 aa15.85■□□□□ 0.13
DNMT1-201ENST00000340748 RUNDC1Q96C34 613 aa15.85■□□□□ 0.13
DNMT1-201ENST00000340748 HFM1A2PYH4 1435 aa15.84■□□□□ 0.13
DNMT1-201ENST00000340748 DDX11L8A8MPP1 907 aa15.84■□□□□ 0.13
DNMT1-201ENST00000340748 TPM4P67936 248 aa15.84■□□□□ 0.13
DNMT1-201ENST00000340748 DAPK1P53355 1430 aa15.84■□□□□ 0.13
DNMT1-201ENST00000340748 PHF8Q9UPP1 1060 aa15.83■□□□□ 0.13
DNMT1-201ENST00000340748 BRD4O60885 1362 aaPredicted RBP15.83■□□□□ 0.12
DNMT1-201ENST00000340748 ANKRD45Q5TZF3 282 aa15.83■□□□□ 0.12
DNMT1-201ENST00000340748 CCDC34Q96HJ3 373 aa15.83■□□□□ 0.12
DNMT1-201ENST00000340748 FAM177BA6PVY3 158 aa15.83■□□□□ 0.12
DNMT1-201ENST00000340748 WAPLQ7Z5K2 1190 aa15.83■□□□□ 0.12
DNMT1-201ENST00000340748 NECTIN2Q92692 538 aa15.83■□□□□ 0.12
DNMT1-201ENST00000340748 BCL2L13Q9BXK5 485 aa15.83■□□□□ 0.12
DNMT1-201ENST00000340748 SPG7Q9UQ90 795 aa15.82■□□□□ 0.12
DNMT1-201ENST00000340748 SUPT6HQ7KZ85 1726 aaKnown RBP15.82■□□□□ 0.12
DNMT1-201ENST00000340748 AAMPQ13685 434 aa15.82■□□□□ 0.12
DNMT1-201ENST00000340748 COG6Q9Y2V7 657 aa15.82■□□□□ 0.12
DNMT1-201ENST00000340748 PHF14O94880 888 aa15.82■□□□□ 0.12
DNMT1-201ENST00000340748 ELL2O00472 640 aaPredicted RBP15.82■□□□□ 0.12
DNMT1-201ENST00000340748 TRIM34Q9BYJ4 488 aa15.82■□□□□ 0.12
DNMT1-201ENST00000340748 API5Q9BZZ5 524 aaKnown RBP15.82■□□□□ 0.12
DNMT1-201ENST00000340748 KIF3AQ9Y496 699 aa15.82■□□□□ 0.12
DNMT1-201ENST00000340748 ABCC2Q92887 1545 aa15.82■□□□□ 0.12
DNMT1-201ENST00000340748 ROCK1Q13464 1354 aa15.82■□□□□ 0.12
DNMT1-201ENST00000340748 KIF16BQ96L93 1317 aa15.81■□□□□ 0.12
DNMT1-201ENST00000340748 HMOX1P09601 288 aa15.81■□□□□ 0.12
DNMT1-201ENST00000340748 KRT28Q7Z3Y7 464 aa15.81■□□□□ 0.12
DNMT1-201ENST00000340748 DHX29Q7Z478 1369 aaKnown RBP15.81■□□□□ 0.12
DNMT1-201ENST00000340748 CABP4P57796 275 aa15.81■□□□□ 0.12
DNMT1-201ENST00000340748 CAMSAP2Q08AD1 1489 aa15.81■□□□□ 0.12
DNMT1-201ENST00000340748 PLCH2O75038 1416 aa15.81■□□□□ 0.12
DNMT1-201ENST00000340748 ANKRD30BQ9BXX2 1392 aa15.81■□□□□ 0.12
DNMT1-201ENST00000340748 VPS37DQ86XT2 251 aa15.81■□□□□ 0.12
DNMT1-201ENST00000340748 ADAMTS12P58397 1594 aa15.8■□□□□ 0.12
DNMT1-201ENST00000340748 DZIP1LQ8IYY4 767 aaKnown RBP15.8■□□□□ 0.12
DNMT1-201ENST00000340748 CHMP4CQ96CF2 233 aa15.8■□□□□ 0.12
DNMT1-201ENST00000340748 RIPK4P57078 832 aa15.8■□□□□ 0.12
DNMT1-201ENST00000340748 NUDT16Q96DE0 195 aaKnown RBP15.8■□□□□ 0.12
DNMT1-201ENST00000340748 ATP10BO94823 1461 aa15.8■□□□□ 0.12
DNMT1-201ENST00000340748 FANCIQ9NVI1 1328 aa15.79■□□□□ 0.12
DNMT1-201ENST00000340748 BCL11BQ9C0K0 894 aaPredicted RBP15.79■□□□□ 0.12
DNMT1-201ENST00000340748 ZNF518AQ6AHZ1 1483 aa15.79■□□□□ 0.12
DNMT1-201ENST00000340748 DDX58O95786 925 aaKnown RBP15.79■□□□□ 0.12
DNMT1-201ENST00000340748 NOL10Q9BSC4 688 aaKnown RBP15.79■□□□□ 0.12
DNMT1-201ENST00000340748 CWC22Q9HCG8 908 aaKnown RBP15.79■□□□□ 0.12
DNMT1-201ENST00000340748 KCNH5Q8NCM2 988 aa15.79■□□□□ 0.12
DNMT1-201ENST00000340748 FOXD4L1Q9NU39 408 aa15.77■□□□□ 0.12
DNMT1-201ENST00000340748 SKOR2Q2VWA4 1001 aaPredicted RBP15.77■□□□□ 0.12
DNMT1-201ENST00000340748 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.77■□□□□ 0.119e-8■□□□□ 9.9
DNMT1-201ENST00000340748 TIAM1Q13009 1591 aa15.76■□□□□ 0.11
DNMT1-201ENST00000340748 KIF6Q6ZMV9 814 aa15.76■□□□□ 0.11
DNMT1-201ENST00000340748 GNAI1P63096 354 aa15.76■□□□□ 0.11
DNMT1-201ENST00000340748 NOL8Q76FK4 1167 aaKnown RBP15.76■□□□□ 0.11
DNMT1-201ENST00000340748 RILPL2Q969X0 211 aa15.76■□□□□ 0.11
DNMT1-201ENST00000340748 UHRF1BP1LA0JNW5 1464 aa15.75■□□□□ 0.11
DNMT1-201ENST00000340748 AIMP1Q12904 312 aaKnown RBP15.75■□□□□ 0.11
DNMT1-201ENST00000340748 TSPYL4Q9UJ04 414 aa15.75■□□□□ 0.11
DNMT1-201ENST00000340748 BIVM-ERCC5R4GMW8 1640 aa15.75■□□□□ 0.11
DNMT1-201ENST00000340748 KIAA1107Q9UPP5 1409 aa15.75■□□□□ 0.11
DNMT1-201ENST00000340748 ATP6V1DQ9Y5K8 247 aa15.74■□□□□ 0.11
DNMT1-201ENST00000340748 REC8O95072 547 aa15.74■□□□□ 0.11
DNMT1-201ENST00000340748 CCDC61Q9Y6R9 512 aa15.74■□□□□ 0.11
DNMT1-201ENST00000340748 C9orf78Q9NZ63 289 aaPredicted RBP15.74■□□□□ 0.11
DNMT1-201ENST00000340748 RAPGEF6Q8TEU7 1601 aa15.73■□□□□ 0.11
DNMT1-201ENST00000340748 A2MP01023 1474 aa15.73■□□□□ 0.11
DNMT1-201ENST00000340748 EXOC5O00471 708 aa15.73■□□□□ 0.11
DNMT1-201ENST00000340748 RUFY2Q8WXA3 655 aa15.73■□□□□ 0.11
DNMT1-201ENST00000340748 ZMYM3Q14202 1370 aa15.73■□□□□ 0.11
DNMT1-201ENST00000340748 CTDP1Q9Y5B0 961 aaPredicted RBP15.73■□□□□ 0.11
DNMT1-201ENST00000340748 LRRFIP1Q32MZ4 808 aaKnown RBP15.72■□□□□ 0.11
DNMT1-201ENST00000340748 RIC3Q7Z5B4 369 aa15.72■□□□□ 0.11
DNMT1-201ENST00000340748 NUP160Q12769 1436 aa15.72■□□□□ 0.11
DNMT1-201ENST00000340748 ZNF530Q6P9A1 599 aaPredicted RBP15.72■□□□□ 0.11
DNMT1-201ENST00000340748 CLSTN1O94985 981 aa15.72■□□□□ 0.11
DNMT1-201ENST00000340748 GAS2L2Q8NHY3 880 aa15.72■□□□□ 0.11
DNMT1-201ENST00000340748 PCF11O94913 1555 aaKnown RBP15.71■□□□□ 0.11
DNMT1-201ENST00000340748 CEP170Q5SW79 1584 aa15.71■□□□□ 0.11
DNMT1-201ENST00000340748 DIAPH3Q9NSV4 1193 aa15.71■□□□□ 0.11
DNMT1-201ENST00000340748 NCBP3Q53F19 620 aaKnown RBP15.7■□□□□ 0.1
DNMT1-201ENST00000340748 LRRC59Q96AG4 307 aaKnown RBP15.7■□□□□ 0.1
DNMT1-201ENST00000340748 NPHP3Q7Z494 1330 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms