RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 STAC3Q96MF2 364 aa18.34■□□□□ 0.53
CPSF7-201ENST00000340437 ERVK-7P63135 1459 aa18.33■□□□□ 0.53
CPSF7-201ENST00000340437 MADDQ8WXG6 1647 aa18.33■□□□□ 0.53
CPSF7-201ENST00000340437 MYH16Q9H6N6 1097 aa18.32■□□□□ 0.52
CPSF7-201ENST00000340437 SLC24A1O60721 1099 aa18.31■□□□□ 0.52
CPSF7-201ENST00000340437 FBLN1P23142 703 aa18.31■□□□□ 0.52
CPSF7-201ENST00000340437 CLTCL1P53675 1640 aa18.31■□□□□ 0.52
CPSF7-201ENST00000340437 DZIP1LQ8IYY4 767 aaKnown RBP18.31■□□□□ 0.52
CPSF7-201ENST00000340437 PLXNC1O60486 1568 aa18.31■□□□□ 0.52
CPSF7-201ENST00000340437 ZKSCAN2Q63HK3 967 aa18.3■□□□□ 0.52
CPSF7-201ENST00000340437 CHD1O14646 1710 aa18.3■□□□□ 0.52
CPSF7-201ENST00000340437 MINK1Q8N4C8 1332 aaPredicted RBP18.3■□□□□ 0.52
CPSF7-201ENST00000340437 SYNMO15061 1565 aa18.29■□□□□ 0.52
CPSF7-201ENST00000340437 ELL2O00472 640 aaPredicted RBP18.29■□□□□ 0.52
CPSF7-201ENST00000340437 LAMC1P11047 1609 aa18.29■□□□□ 0.52
CPSF7-201ENST00000340437 TBC1D2Q9BYX2 928 aa18.29■□□□□ 0.52
CPSF7-201ENST00000340437 FANCAO15360 1455 aa18.28■□□□□ 0.52
CPSF7-201ENST00000340437 FOXD4L1Q9NU39 408 aa18.28■□□□□ 0.52
CPSF7-201ENST00000340437 NPC1L1Q9UHC9 1359 aa18.28■□□□□ 0.52
CPSF7-201ENST00000340437 ABCC1P33527 1531 aa18.27■□□□□ 0.51
CPSF7-201ENST00000340437 POLR3AO14802 1390 aaPredicted RBP18.26■□□□□ 0.51
CPSF7-201ENST00000340437 MVPQ14764 893 aaKnown RBP18.26■□□□□ 0.51
CPSF7-201ENST00000340437 TRPM2O94759 1503 aa18.26■□□□□ 0.51
CPSF7-201ENST00000340437 WDR63Q8IWG1 891 aa18.26■□□□□ 0.51
CPSF7-201ENST00000340437 PTPRTO14522 1441 aa18.26■□□□□ 0.51
CPSF7-201ENST00000340437 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.26■□□□□ 0.51
CPSF7-201ENST00000340437 NOB1Q9ULX3 412 aaKnown RBP18.26■□□□□ 0.51
CPSF7-201ENST00000340437 ADGRL1O94910 1474 aa18.25■□□□□ 0.51
CPSF7-201ENST00000340437 SSH1Q8WYL5 1049 aa18.25■□□□□ 0.51
CPSF7-201ENST00000340437 SOX12O15370 315 aa18.25■□□□□ 0.51
CPSF7-201ENST00000340437 RIPK4P57078 832 aa18.25■□□□□ 0.51
CPSF7-201ENST00000340437 NGEFQ8N5V2 710 aa18.25■□□□□ 0.51
CPSF7-201ENST00000340437 EVC2Q86UK5 1308 aa18.25■□□□□ 0.51
CPSF7-201ENST00000340437 LNPKQ9C0E8 428 aa18.24■□□□□ 0.51
CPSF7-201ENST00000340437 C14orf93Q9H972 538 aaKnown RBP18.24■□□□□ 0.51
CPSF7-201ENST00000340437 RNF17Q9BXT8 1623 aaKnown RBP18.24■□□□□ 0.51
CPSF7-201ENST00000340437 KDM5AP29375 1690 aaKnown RBP18.24■□□□□ 0.51
CPSF7-201ENST00000340437 C22orf23Q9BZE7 217 aa18.24■□□□□ 0.51
CPSF7-201ENST00000340437 IQGAP1P46940 1657 aa18.23■□□□□ 0.51
CPSF7-201ENST00000340437 RAPGEF3O95398 923 aa18.23■□□□□ 0.51
CPSF7-201ENST00000340437 TRIM27P14373 513 aa18.23■□□□□ 0.51
CPSF7-201ENST00000340437 C1orf115Q9H7X2 142 aa18.22■□□□□ 0.51
CPSF7-201ENST00000340437 TBC1D32Q96NH3 1257 aa18.22■□□□□ 0.51
CPSF7-201ENST00000340437 ZCCHC11Q5TAX3 1644 aaKnown RBP18.22■□□□□ 0.51
CPSF7-201ENST00000340437 TMEM57Q8N5G2 664 aa18.21■□□□□ 0.51
CPSF7-201ENST00000340437 THUMPD2Q9BTF0 503 aaKnown RBP18.21■□□□□ 0.51
CPSF7-201ENST00000340437 TMPOP42166 694 aaKnown RBP18.21■□□□□ 0.51
CPSF7-201ENST00000340437 HSP90AA1P07900 732 aaKnown RBP18.2■□□□□ 0.5
CPSF7-201ENST00000340437 HMOX1P09601 288 aa18.2■□□□□ 0.5
CPSF7-201ENST00000340437 NUTM2FA1L443 756 aa18.2■□□□□ 0.5
CPSF7-201ENST00000340437 ZFYVE16Q7Z3T8 1539 aa18.19■□□□□ 0.5
CPSF7-201ENST00000340437 RTEL1-TNFRSF6BF6WH68 1400 aa18.19■□□□□ 0.5
CPSF7-201ENST00000340437 SPHKAPQ2M3C7 1700 aa18.19■□□□□ 0.5
CPSF7-201ENST00000340437 ATP7AQ04656 1500 aa18.19■□□□□ 0.5
CPSF7-201ENST00000340437 MYOM1P52179 1685 aa18.17■□□□□ 0.5
CPSF7-201ENST00000340437 VGFO15240 615 aaPredicted RBP18.17■□□□□ 0.5
CPSF7-201ENST00000340437 CYB5RLQ6IPT4 315 aa18.17■□□□□ 0.5
CPSF7-201ENST00000340437 ATF7IPQ6VMQ6 1270 aa18.17■□□□□ 0.5
CPSF7-201ENST00000340437 HSCBQ8IWL3 235 aa18.17■□□□□ 0.5
CPSF7-201ENST00000340437 PRAM1Q96QH2 718 aa18.16■□□□□ 0.5
CPSF7-201ENST00000340437 ANKRD45Q5TZF3 282 aa18.16■□□□□ 0.5
CPSF7-201ENST00000340437 NINLQ9Y2I6 1382 aa18.16■□□□□ 0.5
CPSF7-201ENST00000340437 DDX19BQ9UMR2 479 aa18.16■□□□□ 0.5
CPSF7-201ENST00000340437 ABCA6Q8N139 1617 aa18.15■□□□□ 0.5
CPSF7-201ENST00000340437 DIAPH1O60610 1272 aaKnown RBP18.14■□□□□ 0.49
CPSF7-201ENST00000340437 APBB1O00213 710 aa18.14■□□□□ 0.49
CPSF7-201ENST00000340437 IDI1Q13907 227 aa18.14■□□□□ 0.49
CPSF7-201ENST00000340437 TRIM35Q9UPQ4 493 aa18.14■□□□□ 0.49
CPSF7-201ENST00000340437 CLASP1Q7Z460 1538 aa18.14■□□□□ 0.49
CPSF7-201ENST00000340437 PANK2Q9BZ23 570 aa18.13■□□□□ 0.49
CPSF7-201ENST00000340437 GOLGA6L3A6NEY3 463 aa18.13■□□□□ 0.49
CPSF7-201ENST00000340437 CABP1Q9NZU7 370 aa18.13■□□□□ 0.49
CPSF7-201ENST00000340437 HSP90AB1P08238 724 aaKnown RBP18.13■□□□□ 0.49
CPSF7-201ENST00000340437 ANTXR1Q9H6X2 564 aa18.13■□□□□ 0.49
CPSF7-201ENST00000340437 CEP152O94986 1710 aa18.12■□□□□ 0.49
CPSF7-201ENST00000340437 MCM4P33991 863 aa18.12■□□□□ 0.49
CPSF7-201ENST00000340437 MAP3K4Q9Y6R4 1608 aa18.12■□□□□ 0.49
CPSF7-201ENST00000340437 PRKAR2BP31323 418 aa18.12■□□□□ 0.49
CPSF7-201ENST00000340437 FYB1O15117 783 aa18.11■□□□□ 0.49
CPSF7-201ENST00000340437 TERF2IPQ9NYB0 399 aa18.11■□□□□ 0.49
CPSF7-201ENST00000340437 PRKCSHP14314 528 aaPredicted RBP18.11■□□□□ 0.49
CPSF7-201ENST00000340437 PHF23Q9BUL5 403 aaPredicted RBP18.1■□□□□ 0.49
CPSF7-201ENST00000340437 TRAK2O60296 914 aa18.1■□□□□ 0.49
CPSF7-201ENST00000340437 L1TD1Q5T7N2 865 aaKnown RBP18.1■□□□□ 0.49
CPSF7-201ENST00000340437 TET3O43151 1660 aa18.1■□□□□ 0.49
CPSF7-201ENST00000340437 IPO8O15397 1037 aaKnown RBP18.1■□□□□ 0.49
CPSF7-201ENST00000340437 CCDC27Q2M243 656 aa18.1■□□□□ 0.49
CPSF7-201ENST00000340437 CHMP5Q9NZZ3 219 aa18.09■□□□□ 0.49
CPSF7-201ENST00000340437 HDGFL2Q7Z4V5 671 aaPredicted RBP18.09■□□□□ 0.49
CPSF7-201ENST00000340437 NPATQ14207 1427 aa18.09■□□□□ 0.49
CPSF7-201ENST00000340437 A0A1W2PP64 1363 aa18.09■□□□□ 0.49
CPSF7-201ENST00000340437 ESF1Q9H501 851 aaKnown RBP18.08■□□□□ 0.49
CPSF7-201ENST00000340437 ASXL2Q76L83 1435 aa18.08■□□□□ 0.49
CPSF7-201ENST00000340437 ZNF518AQ6AHZ1 1483 aa18.07■□□□□ 0.48
CPSF7-201ENST00000340437 RRAGDQ9NQL2 400 aaPredicted RBP18.07■□□□□ 0.48
CPSF7-201ENST00000340437 XRCC6P12956 609 aaKnown RBP eCLIP18.07■□□□□ 0.48
CPSF7-201ENST00000340437 FBXO31Q5XUX0 539 aaPredicted RBP18.07■□□□□ 0.48
CPSF7-201ENST00000340437 WAPLQ7Z5K2 1190 aa18.07■□□□□ 0.48
CPSF7-201ENST00000340437 ANKRD36BQ8N2N9 1353 aa18.07■□□□□ 0.48
CPSF7-201ENST00000340437 AAMPQ13685 434 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms