RNA–Protein interactions for RNA: ENST00000338748.9

SCNN1A-202, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 3

Gene SCNN1A, Length 2,203 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-202ENST00000338748 ANKRD36BQ8N2N9 1353 aa21.68■■□□□ 1.06
SCNN1A-202ENST00000338748 USP32Q8NFA0 1604 aa21.68■■□□□ 1.06
SCNN1A-202ENST00000338748 PUS7Q96PZ0 661 aaKnown RBP21.68■■□□□ 1.06
SCNN1A-202ENST00000338748 TSHZ2Q9NRE2 1034 aa21.68■■□□□ 1.06
SCNN1A-202ENST00000338748 POGKQ9P215 609 aa21.67■■□□□ 1.06
SCNN1A-202ENST00000338748 TNRQ92752 1358 aa21.67■■□□□ 1.06
SCNN1A-202ENST00000338748 TNNT2P45379 298 aaPredicted RBP21.67■■□□□ 1.06
SCNN1A-202ENST00000338748 SRPK2P78362 688 aaKnown RBP21.67■■□□□ 1.06
SCNN1A-202ENST00000338748 ERICH6BQ5W0A0 696 aa21.66■■□□□ 1.06
SCNN1A-202ENST00000338748 PLEKHH1Q9ULM0 1364 aa21.66■■□□□ 1.06
SCNN1A-202ENST00000338748 A0A1W2PP64 1363 aa21.65■■□□□ 1.06
SCNN1A-202ENST00000338748 PDE3BQ13370 1112 aa21.64■■□□□ 1.06
SCNN1A-202ENST00000338748 MORC1Q86VD1 984 aa21.64■■□□□ 1.05
SCNN1A-202ENST00000338748 PPP4R2Q9NY27 417 aa21.64■■□□□ 1.05
SCNN1A-202ENST00000338748 CCDC146Q8IYE0 955 aa21.63■■□□□ 1.05
SCNN1A-202ENST00000338748 CGNL1Q0VF96 1302 aa21.63■■□□□ 1.05
SCNN1A-202ENST00000338748 METP08581 1390 aa21.63■■□□□ 1.05
SCNN1A-202ENST00000338748 WAPLQ7Z5K2 1190 aa21.63■■□□□ 1.05
SCNN1A-202ENST00000338748 UBR1Q8IWV7 1749 aa21.62■■□□□ 1.05
SCNN1A-202ENST00000338748 CD163L1Q9NR16 1453 aa21.62■■□□□ 1.05
SCNN1A-202ENST00000338748 DLC1Q96QB1 1528 aa21.61■■□□□ 1.05
SCNN1A-202ENST00000338748 CEBPAP49715 358 aaPredicted RBP21.61■■□□□ 1.05
SCNN1A-202ENST00000338748 B4GALNT3Q6L9W6 998 aa21.6■■□□□ 1.05
SCNN1A-202ENST00000338748 SHPRHQ149N8 1683 aa21.6■■□□□ 1.05
SCNN1A-202ENST00000338748 POLR3AO14802 1390 aaPredicted RBP21.6■■□□□ 1.05
SCNN1A-202ENST00000338748 ATAD2Q6PL18 1390 aa21.59■■□□□ 1.05
SCNN1A-202ENST00000338748 CDK19Q9BWU1 502 aa21.59■■□□□ 1.05
SCNN1A-202ENST00000338748 RCAN3Q9UKA8 241 aa21.59■■□□□ 1.05
SCNN1A-202ENST00000338748 ZNF521Q96K83 1311 aa21.58■■□□□ 1.05
SCNN1A-202ENST00000338748 NINLQ9Y2I6 1382 aa21.58■■□□□ 1.04
SCNN1A-202ENST00000338748 ABCC11Q96J66 1382 aa21.57■■□□□ 1.04
SCNN1A-202ENST00000338748 TMEM2Q9UHN6 1383 aa21.57■■□□□ 1.04
SCNN1A-202ENST00000338748 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.57■■□□□ 1.04
SCNN1A-202ENST00000338748 TRHP20396 242 aaPredicted RBP21.56■■□□□ 1.04
SCNN1A-202ENST00000338748 RRP1P56182 461 aaKnown RBP21.55■■□□□ 1.04
SCNN1A-202ENST00000338748 APAF1O14727 1248 aa21.55■■□□□ 1.04
SCNN1A-202ENST00000338748 NSD2O96028 1365 aa21.54■■□□□ 1.04
SCNN1A-202ENST00000338748 MTHFSP49914 203 aa21.54■■□□□ 1.04
SCNN1A-202ENST00000338748 NLRP1Q9C000 1473 aa21.54■■□□□ 1.04
SCNN1A-202ENST00000338748 C3P01024 1663 aa21.53■■□□□ 1.04
SCNN1A-202ENST00000338748 PLPPR3Q6T4P5 718 aa21.52■■□□□ 1.04
SCNN1A-202ENST00000338748 TXNDC2Q86VQ3 553 aa21.52■■□□□ 1.04
SCNN1A-202ENST00000338748 GGNBP2Q9H3C7 697 aa21.52■■□□□ 1.04
SCNN1A-202ENST00000338748 CABP1Q9NZU7 370 aa21.52■■□□□ 1.04
SCNN1A-202ENST00000338748 LTKP29376 864 aa21.51■■□□□ 1.03
SCNN1A-202ENST00000338748 DUSP27Q5VZP5 1158 aa21.5■■□□□ 1.03
SCNN1A-202ENST00000338748 TERF2IPQ9NYB0 399 aa21.5■■□□□ 1.03
SCNN1A-202ENST00000338748 FER1L4A9Z1Z3 1794 aa21.5■■□□□ 1.03
SCNN1A-202ENST00000338748 ADAMTS13Q76LX8 1427 aa21.5■■□□□ 1.03
SCNN1A-202ENST00000338748 KNDC1Q76NI1 1749 aa21.49■■□□□ 1.03
SCNN1A-202ENST00000338748 FYB1O15117 783 aa21.49■■□□□ 1.03
SCNN1A-202ENST00000338748 SPINK5Q9NQ38 1064 aaPredicted RBP21.49■■□□□ 1.03
SCNN1A-202ENST00000338748 TECPR2O15040 1411 aa21.48■■□□□ 1.03
SCNN1A-202ENST00000338748 DMRT2Q9Y5R5 561 aa21.47■■□□□ 1.03
SCNN1A-202ENST00000338748 CPS1P31327 1500 aa21.47■■□□□ 1.03
SCNN1A-202ENST00000338748 GOLGA2Q08379 1002 aa21.47■■□□□ 1.03
SCNN1A-202ENST00000338748 ANKRD26Q9UPS8 1709 aa21.47■■□□□ 1.03
SCNN1A-202ENST00000338748 HDGFP51858 240 aaKnown RBP21.46■■□□□ 1.03
SCNN1A-202ENST00000338748 PLIN1O60240 522 aa21.45■■□□□ 1.03
SCNN1A-202ENST00000338748 ROBO2Q9HCK4 1378 aa21.45■■□□□ 1.02
SCNN1A-202ENST00000338748 FAM135BQ49AJ0 1406 aa21.45■■□□□ 1.02
SCNN1A-202ENST00000338748 WASLO00401 505 aaPredicted RBP21.44■■□□□ 1.02
SCNN1A-202ENST00000338748 HDGFL2Q7Z4V5 671 aaPredicted RBP21.44■■□□□ 1.02
SCNN1A-202ENST00000338748 NCKAP5LQ9HCH0 1330 aa21.44■■□□□ 1.02
SCNN1A-202ENST00000338748 SLFN5Q08AF3 891 aa21.44■■□□□ 1.02
SCNN1A-202ENST00000338748 PLEKHG1Q9ULL1 1385 aa21.44■■□□□ 1.02
SCNN1A-202ENST00000338748 MED14O60244 1454 aa21.43■■□□□ 1.02
SCNN1A-202ENST00000338748 IQSEC2Q5JU85 1478 aa21.43■■□□□ 1.02
SCNN1A-202ENST00000338748 EXOC6Q8TAG9 804 aa21.43■■□□□ 1.02
SCNN1A-202ENST00000338748 ATP7BP35670 1465 aa21.43■■□□□ 1.02
SCNN1A-202ENST00000338748 KIF20BQ96Q89 1820 aa21.43■■□□□ 1.02
SCNN1A-202ENST00000338748 TRMT2AQ8IZ69 625 aaKnown RBP21.41■■□□□ 1.02
SCNN1A-202ENST00000338748 CFAP53Q96M91 514 aa21.41■■□□□ 1.02
SCNN1A-202ENST00000338748 COL3A1P02461 1466 aaPredicted RBP21.41■■□□□ 1.02
SCNN1A-202ENST00000338748 PPIP5K1Q6PFW1 1433 aa21.41■■□□□ 1.02
SCNN1A-202ENST00000338748 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.41■■□□□ 1.02
SCNN1A-202ENST00000338748 CCDC136Q96JN2 1154 aa21.4■■□□□ 1.02
SCNN1A-202ENST00000338748 SLC26A8Q96RN1 970 aa21.4■■□□□ 1.02
SCNN1A-202ENST00000338748 RRP7AQ9Y3A4 280 aaKnown RBP21.4■■□□□ 1.02
SCNN1A-202ENST00000338748 PTPRUQ92729 1446 aa21.39■■□□□ 1.01
SCNN1A-202ENST00000338748 ARHGAP23Q9P227 1491 aa21.39■■□□□ 1.01
SCNN1A-202ENST00000338748 SLIT1O75093 1534 aa21.39■■□□□ 1.01
SCNN1A-202ENST00000338748 CPSF1Q10570 1443 aaKnown RBP21.39■■□□□ 1.01
SCNN1A-202ENST00000338748 NEUROD2Q15784 382 aa21.38■■□□□ 1.01
SCNN1A-202ENST00000338748 WWC1Q8IX03 1113 aa21.38■■□□□ 1.01
SCNN1A-202ENST00000338748 RUNDC1Q96C34 613 aa21.38■■□□□ 1.01
SCNN1A-202ENST00000338748 SIRT1Q96EB6 747 aa21.38■■□□□ 1.01
SCNN1A-202ENST00000338748 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.38■■□□□ 1.01
SCNN1A-202ENST00000338748 FBLN1P23142 703 aa21.37■■□□□ 1.01
SCNN1A-202ENST00000338748 TCP11L2Q8N4U5 519 aa21.37■■□□□ 1.01
SCNN1A-202ENST00000338748 NUDT16Q96DE0 195 aaKnown RBP21.37■■□□□ 1.01
SCNN1A-202ENST00000338748 PRR36Q9H6K5 1346 aa21.37■■□□□ 1.01
SCNN1A-202ENST00000338748 U2AF1L5P0DN76 240 aaPredicted RBP21.36■■□□□ 1.01
SCNN1A-202ENST00000338748 U2AF1Q01081 240 aaKnown RBP eCLIP21.36■■□□□ 1.01
SCNN1A-202ENST00000338748 C20orf194Q5TEA3 1177 aa21.36■■□□□ 1.01
SCNN1A-202ENST00000338748 RBM19Q9Y4C8 960 aaKnown RBP21.35■■□□□ 1.01
SCNN1A-202ENST00000338748 NKTRP30414 1462 aaKnown RBP21.34■■□□□ 1.01
SCNN1A-202ENST00000338748 CDC42BPGQ6DT37 1551 aa21.34■■□□□ 1.01
SCNN1A-202ENST00000338748 E9PSI1 815 aa21.33■■□□□ 1.01
SCNN1A-202ENST00000338748 EID1Q9Y6B2 187 aa21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms