RNA–Protein interactions for RNA: ENST00000337392.9

CLPTM1-201, Transcript of CLPTM1, transmembrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPTM1, Length 2,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-201ENST00000337392 PDE3BQ13370 1112 aa30.62■■■□□ 2.49
CLPTM1-201ENST00000337392 NPC1L1Q9UHC9 1359 aa30.62■■■□□ 2.49
CLPTM1-201ENST00000337392 CLTCQ00610 1675 aaKnown RBP30.62■■■□□ 2.49
CLPTM1-201ENST00000337392 PRKCSHP14314 528 aaPredicted RBP30.62■■■□□ 2.49
CLPTM1-201ENST00000337392 EVC2Q86UK5 1308 aa30.61■■■□□ 2.49
CLPTM1-201ENST00000337392 SLC24A1O60721 1099 aa30.6■■■□□ 2.49
CLPTM1-201ENST00000337392 NEUROD2Q15784 382 aa30.6■■■□□ 2.49
CLPTM1-201ENST00000337392 C20orf194Q5TEA3 1177 aa30.59■■■□□ 2.49
CLPTM1-201ENST00000337392 PLPPR3Q6T4P5 718 aa30.59■■■□□ 2.49
CLPTM1-201ENST00000337392 POGKQ9P215 609 aa30.59■■■□□ 2.49
CLPTM1-201ENST00000337392 WAPLQ7Z5K2 1190 aa30.58■■■□□ 2.49
CLPTM1-201ENST00000337392 RRP7AQ9Y3A4 280 aaKnown RBP30.57■■■□□ 2.48
CLPTM1-201ENST00000337392 DUSP27Q5VZP5 1158 aa30.56■■■□□ 2.48
CLPTM1-201ENST00000337392 KIF13AQ9H1H9 1805 aa30.55■■■□□ 2.48
CLPTM1-201ENST00000337392 MTHFSP49914 203 aa30.54■■■□□ 2.48
CLPTM1-201ENST00000337392 GGNBP2Q9H3C7 697 aa30.53■■■□□ 2.48
CLPTM1-201ENST00000337392 SKAP1Q86WV1 359 aa30.53■■■□□ 2.48
CLPTM1-201ENST00000337392 ZNF521Q96K83 1311 aa30.52■■■□□ 2.48
CLPTM1-201ENST00000337392 YTHDC2Q9H6S0 1430 aaKnown RBP30.52■■■□□ 2.48
CLPTM1-201ENST00000337392 GOLGA2Q08379 1002 aa30.51■■■□□ 2.47
CLPTM1-201ENST00000337392 PTPRMP28827 1452 aa30.5■■■□□ 2.47
CLPTM1-201ENST00000337392 A0A1W2PP64 1363 aa30.5■■■□□ 2.47
CLPTM1-201ENST00000337392 CGNL1Q0VF96 1302 aa30.49■■■□□ 2.47
CLPTM1-201ENST00000337392 CRBNQ96SW2 442 aa30.48■■■□□ 2.47
CLPTM1-201ENST00000337392 FBLN1P23142 703 aa30.48■■■□□ 2.47
CLPTM1-201ENST00000337392 ZFYVE9O95405 1425 aa30.47■■■□□ 2.47
CLPTM1-201ENST00000337392 INSRP06213 1382 aa30.47■■■□□ 2.47
CLPTM1-201ENST00000337392 ESF1Q9H501 851 aaKnown RBP30.46■■■□□ 2.47
CLPTM1-201ENST00000337392 ALKQ9UM73 1620 aa30.46■■■□□ 2.47
CLPTM1-201ENST00000337392 A2ML1A8K2U0 1454 aa30.46■■■□□ 2.47
CLPTM1-201ENST00000337392 ANKRD36BQ8N2N9 1353 aa30.45■■■□□ 2.46
CLPTM1-201ENST00000337392 CDK19Q9BWU1 502 aa30.44■■■□□ 2.46
CLPTM1-201ENST00000337392 SLFN5Q08AF3 891 aa30.43■■■□□ 2.46
CLPTM1-201ENST00000337392 CABP1Q9NZU7 370 aa30.43■■■□□ 2.46
CLPTM1-201ENST00000337392 ZMYM3Q14202 1370 aa30.42■■■□□ 2.46
CLPTM1-201ENST00000337392 RIMS2Q9UQ26 1411 aa30.42■■■□□ 2.46
CLPTM1-201ENST00000337392 CEBPAP49715 358 aaPredicted RBP30.42■■■□□ 2.46
CLPTM1-201ENST00000337392 AGLP35573 1532 aa30.41■■■□□ 2.46
CLPTM1-201ENST00000337392 POLR3AO14802 1390 aaPredicted RBP30.4■■■□□ 2.46
CLPTM1-201ENST00000337392 MSH5O43196 834 aa30.4■■■□□ 2.46
CLPTM1-201ENST00000337392 NCKAP5LQ9HCH0 1330 aa30.4■■■□□ 2.46
CLPTM1-201ENST00000337392 TXNDC2Q86VQ3 553 aa30.39■■■□□ 2.45
CLPTM1-201ENST00000337392 BCAR3O75815 825 aa30.38■■■□□ 2.45
CLPTM1-201ENST00000337392 SUGP2Q8IX01 1082 aaKnown RBP eCLIP30.38■■■□□ 2.45
CLPTM1-201ENST00000337392 ARHGEF40Q8TER5 1519 aa30.36■■■□□ 2.45
CLPTM1-201ENST00000337392 SHPRHQ149N8 1683 aa30.36■■■□□ 2.45
CLPTM1-201ENST00000337392 METP08581 1390 aa30.35■■■□□ 2.45
CLPTM1-201ENST00000337392 FYB1O15117 783 aa30.35■■■□□ 2.45
CLPTM1-201ENST00000337392 SPATA31D1Q6ZQQ2 1576 aa30.34■■■□□ 2.45
CLPTM1-201ENST00000337392 REREQ9P2R6 1566 aa30.34■■■□□ 2.45
CLPTM1-201ENST00000337392 WWC1Q8IX03 1113 aa30.34■■■□□ 2.45
CLPTM1-201ENST00000337392 TCP11L2Q8N4U5 519 aa30.34■■■□□ 2.45
CLPTM1-201ENST00000337392 U2AF1L5P0DN76 240 aaPredicted RBP30.34■■■□□ 2.45
CLPTM1-201ENST00000337392 U2AF1Q01081 240 aaKnown RBP eCLIP30.34■■■□□ 2.45
CLPTM1-201ENST00000337392 CD163L1Q9NR16 1453 aa30.33■■■□□ 2.45
CLPTM1-201ENST00000337392 U2SURPO15042 1029 aaKnown RBP30.3■■■□□ 2.44
CLPTM1-201ENST00000337392 PPP6R1Q9UPN7 881 aa30.3■■■□□ 2.44
CLPTM1-201ENST00000337392 TRMT2AQ8IZ69 625 aaKnown RBP30.29■■■□□ 2.44
CLPTM1-201ENST00000337392 ABCC11Q96J66 1382 aa30.28■■■□□ 2.44
CLPTM1-201ENST00000337392 NUTM2FA1L443 756 aa30.28■■■□□ 2.44
CLPTM1-201ENST00000337392 PPM1GO15355 546 aaPredicted RBP30.28■■■□□ 2.44
CLPTM1-201ENST00000337392 TERF2IPQ9NYB0 399 aa30.26■■■□□ 2.44
CLPTM1-201ENST00000337392 RUNDC1Q96C34 613 aa30.26■■■□□ 2.43
CLPTM1-201ENST00000337392 PUS7Q96PZ0 661 aaKnown RBP30.26■■■□□ 2.43
CLPTM1-201ENST00000337392 CFAP53Q96M91 514 aa30.25■■■□□ 2.43
CLPTM1-201ENST00000337392 ZRANB1Q9UGI0 708 aa30.25■■■□□ 2.43
CLPTM1-201ENST00000337392 ATAD2Q6PL18 1390 aa30.24■■■□□ 2.43
CLPTM1-201ENST00000337392 E9PSI1 815 aa30.23■■■□□ 2.43
CLPTM1-201ENST00000337392 BCL2L13Q9BXK5 485 aa30.23■■■□□ 2.43
CLPTM1-201ENST00000337392 USP32Q8NFA0 1604 aa30.22■■■□□ 2.43
CLPTM1-201ENST00000337392 NKTRP30414 1462 aaKnown RBP30.21■■■□□ 2.43
CLPTM1-201ENST00000337392 TNRQ92752 1358 aa30.21■■■□□ 2.43
CLPTM1-201ENST00000337392 NRXN3Q9Y4C0 1643 aa30.21■■■□□ 2.43
CLPTM1-201ENST00000337392 HDGFL2Q7Z4V5 671 aaPredicted RBP30.2■■■□□ 2.43
CLPTM1-201ENST00000337392 LTKP29376 864 aa30.19■■■□□ 2.42
CLPTM1-201ENST00000337392 SETD1AO15047 1707 aaKnown RBP30.19■■■□□ 2.42
CLPTM1-201ENST00000337392 NLRP1Q9C000 1473 aa30.18■■■□□ 2.42
CLPTM1-201ENST00000337392 SLC26A8Q96RN1 970 aa30.18■■■□□ 2.42
CLPTM1-201ENST00000337392 TNNQ9UQP3 1299 aa30.17■■■□□ 2.42
CLPTM1-201ENST00000337392 NSD2O96028 1365 aa30.15■■■□□ 2.42
CLPTM1-201ENST00000337392 NME9Q86XW9 330 aa30.15■■■□□ 2.42
CLPTM1-201ENST00000337392 FRAT1Q92837 279 aaPredicted RBP30.15■■■□□ 2.42
CLPTM1-201ENST00000337392 IQSEC2Q5JU85 1478 aa30.14■■■□□ 2.42
CLPTM1-201ENST00000337392 WASLO00401 505 aaPredicted RBP30.13■■■□□ 2.41
CLPTM1-201ENST00000337392 TRHP20396 242 aaPredicted RBP30.13■■■□□ 2.41
CLPTM1-201ENST00000337392 TSR2Q969E8 191 aaKnown RBP30.13■■■□□ 2.41
CLPTM1-201ENST00000337392 PANK1Q8TE04 598 aa30.12■■■□□ 2.41
CLPTM1-201ENST00000337392 FANCIQ9NVI1 1328 aa30.12■■■□□ 2.41
CLPTM1-201ENST00000337392 NINLQ9Y2I6 1382 aa30.11■■■□□ 2.41
CLPTM1-201ENST00000337392 EMILIN1Q9Y6C2 1016 aa30.1■■■□□ 2.41
CLPTM1-201ENST00000337392 NUDT16Q96DE0 195 aaKnown RBP30.09■■■□□ 2.41
CLPTM1-201ENST00000337392 TMEM2Q9UHN6 1383 aa30.09■■■□□ 2.41
CLPTM1-201ENST00000337392 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.09■■■□□ 2.41
CLPTM1-201ENST00000337392 PPIP5K1Q6PFW1 1433 aa30.08■■■□□ 2.41
CLPTM1-201ENST00000337392 ROBO2Q9HCK4 1378 aa30.08■■■□□ 2.41
CLPTM1-201ENST00000337392 PLEKHF1Q96S99 279 aa30.07■■■□□ 2.4
CLPTM1-201ENST00000337392 PHF23Q9BUL5 403 aaPredicted RBP30.07■■■□□ 2.4
CLPTM1-201ENST00000337392 COG6Q9Y2V7 657 aa30.07■■■□□ 2.4
CLPTM1-201ENST00000337392 PRR36Q9H6K5 1346 aa30.06■■■□□ 2.4
CLPTM1-201ENST00000337392 HMOX1P09601 288 aa30.06■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms