RNA–Protein interactions for RNA: ENST00000336916.8

FN1-202, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,435 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-202ENST00000336916 PSMA5P28066 241 aa14.86□□□□□ -0.03
FN1-202ENST00000336916 MYO6Q9UM54 1294 aa14.86□□□□□ -0.03
FN1-202ENST00000336916 CCDC141Q6ZP82 1450 aa14.86□□□□□ -0.03
FN1-202ENST00000336916 DHX8Q14562 1220 aaKnown RBP14.86□□□□□ -0.03
FN1-202ENST00000336916 NCOA2Q15596 1464 aa14.85□□□□□ -0.03
FN1-202ENST00000336916 ERC1Q8IUD2 1116 aa14.85□□□□□ -0.03
FN1-202ENST00000336916 SLC52A1Q9NWF4 448 aa14.85□□□□□ -0.03
FN1-202ENST00000336916 KIF7Q2M1P5 1343 aa14.85□□□□□ -0.03
FN1-202ENST00000336916 GNL3LQ9NVN8 582 aaKnown RBP14.85□□□□□ -0.03
FN1-202ENST00000336916 CDR1P51861 262 aa14.84□□□□□ -0.03
FN1-202ENST00000336916 CFTRP13569 1480 aa14.84□□□□□ -0.03
FN1-202ENST00000336916 DHX16O60231 1041 aaKnown RBP14.84□□□□□ -0.03
FN1-202ENST00000336916 TBC1D2BQ9UPU7 963 aa14.84□□□□□ -0.03
FN1-202ENST00000336916 NUTM2FA1L443 756 aa14.83□□□□□ -0.03
FN1-202ENST00000336916 SLKQ9H2G2 1235 aaPredicted RBP14.83□□□□□ -0.03
FN1-202ENST00000336916 ODF2Q5BJF6 829 aa14.83□□□□□ -0.04
FN1-202ENST00000336916 NFXL1Q6ZNB6 911 aa14.83□□□□□ -0.04
FN1-202ENST00000336916 EPS15P42566 896 aa14.83□□□□□ -0.04
FN1-202ENST00000336916 MCTP1Q6DN14 999 aa14.83□□□□□ -0.04
FN1-202ENST00000336916 FKBP5Q13451 457 aaPredicted RBP14.83□□□□□ -0.04
FN1-202ENST00000336916 ZNF692Q9BU19 519 aaPredicted RBP14.83□□□□□ -0.04
FN1-202ENST00000336916 RIPK4P57078 832 aa14.82□□□□□ -0.04
FN1-202ENST00000336916 CCDC30Q5VVM6 783 aa14.82□□□□□ -0.04
FN1-202ENST00000336916 PDCP20941 246 aa14.82□□□□□ -0.04
FN1-202ENST00000336916 PDIA4P13667 645 aaKnown RBP14.82□□□□□ -0.04
FN1-202ENST00000336916 RIC3Q7Z5B4 369 aa14.82□□□□□ -0.04
FN1-202ENST00000336916 TSPYL4Q9UJ04 414 aa14.82□□□□□ -0.04
FN1-202ENST00000336916 FAM135AQ9P2D6 1515 aa14.82□□□□□ -0.04
FN1-202ENST00000336916 MCM2P49736 904 aa14.82□□□□□ -0.04
FN1-202ENST00000336916 NUCB2P80303 420 aa14.82□□□□□ -0.04
FN1-202ENST00000336916 TIAM1Q13009 1591 aa14.82□□□□□ -0.04
FN1-202ENST00000336916 NUTM2DQ5VT03 806 aaPredicted RBP14.82□□□□□ -0.04
FN1-202ENST00000336916 C9orf84Q5VXU9 1444 aa14.82□□□□□ -0.04
FN1-202ENST00000336916 DZIP1LQ8IYY4 767 aaKnown RBP14.81□□□□□ -0.04
FN1-202ENST00000336916 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.81□□□□□ -0.04
FN1-202ENST00000336916 PLEKHO1Q53GL0 409 aaPredicted RBP14.81□□□□□ -0.04
FN1-202ENST00000336916 CCDC173Q0VFZ6 552 aa14.81□□□□□ -0.04
FN1-202ENST00000336916 PNISRQ8TF01 805 aaKnown RBP14.81□□□□□ -0.04
FN1-202ENST00000336916 CLUAP1Q96AJ1 413 aa14.81□□□□□ -0.04
FN1-202ENST00000336916 CT47B1P0C2W7 299 aaPredicted RBP14.81□□□□□ -0.04
FN1-202ENST00000336916 CNTROBQ8N137 903 aa14.8□□□□□ -0.04
FN1-202ENST00000336916 BRD4O60885 1362 aaPredicted RBP14.8□□□□□ -0.04
FN1-202ENST00000336916 TOPBP1Q92547 1522 aa14.8□□□□□ -0.04
FN1-202ENST00000336916 TXLNAP40222 546 aa14.79□□□□□ -0.04
FN1-202ENST00000336916 RAD54L2Q9Y4B4 1467 aa14.79□□□□□ -0.04
FN1-202ENST00000336916 PTPN23Q9H3S7 1636 aa14.79□□□□□ -0.04
FN1-202ENST00000336916 EIF2S2P20042 333 aaKnown RBP14.79□□□□□ -0.04
FN1-202ENST00000336916 GNAI3P08754 354 aa14.79□□□□□ -0.04
FN1-202ENST00000336916 CCAR1Q8IX12 1150 aaKnown RBP14.79□□□□□ -0.04
FN1-202ENST00000336916 RBM19Q9Y4C8 960 aaKnown RBP14.79□□□□□ -0.04
FN1-202ENST00000336916 TNNT3P45378 269 aaPredicted RBP14.79□□□□□ -0.04
FN1-202ENST00000336916 PCMTD1Q96MG8 357 aaPredicted RBP14.79□□□□□ -0.04
FN1-202ENST00000336916 ANO2Q9NQ90 1003 aa14.78□□□□□ -0.04
FN1-202ENST00000336916 PRG4Q92954 1404 aaPredicted RBP14.78□□□□□ -0.04
FN1-202ENST00000336916 RRP1P56182 461 aaKnown RBP14.78□□□□□ -0.04
FN1-202ENST00000336916 TXLNBQ8N3L3 684 aa14.78□□□□□ -0.04
FN1-202ENST00000336916 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.78□□□□□ -0.04
FN1-202ENST00000336916 CT47A1Q5JQC4 288 aaPredicted RBP14.78□□□□□ -0.04
FN1-202ENST00000336916 GZF1Q9H116 711 aaPredicted RBP14.78□□□□□ -0.04
FN1-202ENST00000336916 ABTB2Q8N961 1025 aa14.77□□□□□ -0.04
FN1-202ENST00000336916 ACBD3Q9H3P7 528 aa14.77□□□□□ -0.04
FN1-202ENST00000336916 RPGRIP1LQ68CZ1 1315 aa14.77□□□□□ -0.04
FN1-202ENST00000336916 UBTFL1P0CB47 393 aaPredicted RBP14.77□□□□□ -0.04
FN1-202ENST00000336916 LETM1O95202 739 aaPredicted RBP14.77□□□□□ -0.05
FN1-202ENST00000336916 PIP4K2AP48426 406 aaPredicted RBP14.77□□□□□ -0.05
FN1-202ENST00000336916 IGF1RP08069 1367 aa14.77□□□□□ -0.05
FN1-202ENST00000336916 MAGI1Q96QZ7 1491 aaPredicted RBP14.76□□□□□ -0.05
FN1-202ENST00000336916 RAD21O60216 631 aa14.76□□□□□ -0.05
FN1-202ENST00000336916 OLFM4Q6UX06 510 aa14.76□□□□□ -0.05
FN1-202ENST00000336916 PHF23Q9BUL5 403 aaPredicted RBP14.76□□□□□ -0.05
FN1-202ENST00000336916 ANKRD30BQ9BXX2 1392 aa14.76□□□□□ -0.05
FN1-202ENST00000336916 TRIM21P19474 475 aaKnown RBP14.76□□□□□ -0.05
FN1-202ENST00000336916 FBXW7Q969H0 707 aa14.76□□□□□ -0.05
FN1-202ENST00000336916 DNAI2Q9GZS0 605 aa14.76□□□□□ -0.05
FN1-202ENST00000336916 SASS6Q6UVJ0 657 aa14.75□□□□□ -0.05
FN1-202ENST00000336916 CLASRPQ8N2M8 674 aaKnown RBP14.75□□□□□ -0.05
FN1-202ENST00000336916 DDX49Q9Y6V7 483 aaKnown RBP14.75□□□□□ -0.05
FN1-202ENST00000336916 CCDC73Q6ZRK6 1079 aa14.75□□□□□ -0.05
FN1-202ENST00000336916 PRKRIP1Q9H875 184 aaPredicted RBP14.75□□□□□ -0.05
FN1-202ENST00000336916 SMC3Q9UQE7 1217 aa14.75□□□□□ -0.05
FN1-202ENST00000336916 TEX35Q5T0J7 233 aa14.74□□□□□ -0.05
FN1-202ENST00000336916 LUC7LQ9NQ29 371 aaKnown RBP14.74□□□□□ -0.05
FN1-202ENST00000336916 AK7Q96M32 723 aa14.74□□□□□ -0.05
FN1-202ENST00000336916 ZSCAN25Q6NSZ9 544 aa14.74□□□□□ -0.05
FN1-202ENST00000336916 TATP17735 454 aaPredicted RBP14.73□□□□□ -0.05
FN1-202ENST00000336916 TROQ12816 1431 aaPredicted RBP14.73□□□□□ -0.05
FN1-202ENST00000336916 ANKRD1Q15327 319 aa14.73□□□□□ -0.05
FN1-202ENST00000336916 NLRP2Q9NX02 1062 aa14.73□□□□□ -0.05
FN1-202ENST00000336916 CCP110O43303 1012 aa14.73□□□□□ -0.05
FN1-202ENST00000336916 SPG7Q9UQ90 795 aa14.73□□□□□ -0.05
FN1-202ENST00000336916 DEKP35659 375 aaKnown RBP14.72□□□□□ -0.05
FN1-202ENST00000336916 ANKLE2Q86XL3 938 aa14.72□□□□□ -0.05
FN1-202ENST00000336916 JMYQ8N9B5 988 aa14.72□□□□□ -0.05
FN1-202ENST00000336916 RRP7AQ9Y3A4 280 aaKnown RBP14.72□□□□□ -0.05
FN1-202ENST00000336916 ZNF428Q96B54 188 aa14.72□□□□□ -0.05
FN1-202ENST00000336916 AQRO60306 1485 aaKnown RBP eCLIP14.72□□□□□ -0.059e-12■■■■■ 26.9
FN1-202ENST00000336916 ATAD2Q6PL18 1390 aa14.72□□□□□ -0.05
FN1-202ENST00000336916 NLRP6P59044 892 aa14.72□□□□□ -0.05
FN1-202ENST00000336916 RUFY1Q96T51 708 aa14.72□□□□□ -0.05
FN1-202ENST00000336916 BICD2Q8TD16 824 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms