RNA–Protein interactions for RNA: ENST00000336714.7

SEC23B-202, Transcript of Sec23 homolog B, coat complex II component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC23B, Length 3,411 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23B-202ENST00000336714 KIAA0586Q9BVV6 1533 aa13.71□□□□□ -0.21
SEC23B-202ENST00000336714 ZNF500O60304 480 aaPredicted RBP13.71□□□□□ -0.22
SEC23B-202ENST00000336714 SMC4Q9NTJ3 1288 aa13.7□□□□□ -0.22
SEC23B-202ENST00000336714 U2AF2P26368 475 aaKnown RBP eCLIP13.7□□□□□ -0.227e-8■■□□□ 12.2
SEC23B-202ENST00000336714 NOL8Q76FK4 1167 aaKnown RBP13.7□□□□□ -0.22
SEC23B-202ENST00000336714 ZNF608Q9ULD9 1512 aaPredicted RBP13.69□□□□□ -0.22
SEC23B-202ENST00000336714 TERF1P54274 439 aa13.69□□□□□ -0.22
SEC23B-202ENST00000336714 PAXIP1Q6ZW49 1069 aaPredicted RBP13.69□□□□□ -0.22
SEC23B-202ENST00000336714 ZNF710Q8N1W2 664 aa13.69□□□□□ -0.22
SEC23B-202ENST00000336714 TTC12Q9H892 705 aaPredicted RBP13.69□□□□□ -0.22
SEC23B-202ENST00000336714 NSFL1CQ9UNZ2 370 aaKnown RBP13.69□□□□□ -0.22
SEC23B-202ENST00000336714 ROCK1Q13464 1354 aa13.69□□□□□ -0.22
SEC23B-202ENST00000336714 RTEL1-TNFRSF6BF6WH68 1400 aa13.69□□□□□ -0.22
SEC23B-202ENST00000336714 DDIT3P35638 169 aa13.68□□□□□ -0.22
SEC23B-202ENST00000336714 DZIP1LQ8IYY4 767 aaKnown RBP13.68□□□□□ -0.22
SEC23B-202ENST00000336714 C1orf115Q9H7X2 142 aa13.68□□□□□ -0.22
SEC23B-202ENST00000336714 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.68□□□□□ -0.22
SEC23B-202ENST00000336714 ERBINQ96RT1 1412 aa13.68□□□□□ -0.22
SEC23B-202ENST00000336714 KIAA2012Q0VF49 1180 aa13.68□□□□□ -0.22
SEC23B-202ENST00000336714 MVPQ14764 893 aaKnown RBP13.68□□□□□ -0.22
SEC23B-202ENST00000336714 TRERF1Q96PN7 1200 aa13.68□□□□□ -0.22
SEC23B-202ENST00000336714 ANKRD45Q5TZF3 282 aa13.68□□□□□ -0.22
SEC23B-202ENST00000336714 CIZ1Q9ULV3 898 aaPredicted RBP13.68□□□□□ -0.22
SEC23B-202ENST00000336714 ANKRD50Q9ULJ7 1429 aa13.68□□□□□ -0.22
SEC23B-202ENST00000336714 TCP11L2Q8N4U5 519 aa13.67□□□□□ -0.22
SEC23B-202ENST00000336714 CCDC39Q9UFE4 941 aa13.67□□□□□ -0.22
SEC23B-202ENST00000336714 AK9Q5TCS8 1911 aa13.67□□□□□ -0.22
SEC23B-202ENST00000336714 EPRSP07814 1512 aaKnown RBP13.67□□□□□ -0.22
SEC23B-202ENST00000336714 TMEM51Q9NW97 253 aa13.67□□□□□ -0.22
SEC23B-202ENST00000336714 UTP14CQ5TAP6 766 aaKnown RBP13.66□□□□□ -0.22
SEC23B-202ENST00000336714 ZGPATQ8N5A5 531 aaKnown RBP13.66□□□□□ -0.22
SEC23B-202ENST00000336714 ZKSCAN2Q63HK3 967 aa13.65□□□□□ -0.22
SEC23B-202ENST00000336714 TMEM63CQ9P1W3 806 aa13.65□□□□□ -0.22
SEC23B-202ENST00000336714 TSPY4P0CV99 314 aa13.65□□□□□ -0.22
SEC23B-202ENST00000336714 TSPY10P0CW01 314 aa13.65□□□□□ -0.22
SEC23B-202ENST00000336714 GPT2Q8TD30 523 aa13.65□□□□□ -0.22
SEC23B-202ENST00000336714 UHRF1BP1Q6BDS2 1440 aa13.65□□□□□ -0.22
SEC23B-202ENST00000336714 APBB1O00213 710 aa13.65□□□□□ -0.22
SEC23B-202ENST00000336714 HNRNPMP52272 730 aaKnown RBP eCLIP13.64□□□□□ -0.23
SEC23B-202ENST00000336714 PDCL2Q8N4E4 241 aa13.64□□□□□ -0.23
SEC23B-202ENST00000336714 KIF2CQ99661 725 aa13.64□□□□□ -0.23
SEC23B-202ENST00000336714 LMBRD1Q9NUN5 540 aa13.64□□□□□ -0.23
SEC23B-202ENST00000336714 GDPD2Q9HCC8 539 aa13.64□□□□□ -0.23
SEC23B-202ENST00000336714 ANKRD30AQ9BXX3 1397 aa13.64□□□□□ -0.23
SEC23B-202ENST00000336714 PTMSP20962 102 aa13.64□□□□□ -0.23
SEC23B-202ENST00000336714 CERS3Q8IU89 383 aa13.64□□□□□ -0.23
SEC23B-202ENST00000336714 MYRIPQ8NFW9 859 aa13.64□□□□□ -0.23
SEC23B-202ENST00000336714 SNX21Q969T3 373 aa13.64□□□□□ -0.23
SEC23B-202ENST00000336714 KIF3AQ9Y496 699 aa13.64□□□□□ -0.23
SEC23B-202ENST00000336714 MAGI2Q86UL8 1455 aa13.63□□□□□ -0.23
SEC23B-202ENST00000336714 ZNF445P59923 1031 aa13.63□□□□□ -0.23
SEC23B-202ENST00000336714 USP25Q9UHP3 1055 aa13.63□□□□□ -0.23
SEC23B-202ENST00000336714 RBM25P49756 843 aaKnown RBP13.62□□□□□ -0.23
SEC23B-202ENST00000336714 PDLIM2Q96JY6 352 aa13.62□□□□□ -0.23
SEC23B-202ENST00000336714 BCL2L12Q9HB09 334 aa13.62□□□□□ -0.23
SEC23B-202ENST00000336714 TRIM27P14373 513 aa13.62□□□□□ -0.23
SEC23B-202ENST00000336714 KCNJ4P48050 445 aa13.62□□□□□ -0.23
SEC23B-202ENST00000336714 TBC1D9Q6ZT07 1266 aa13.62□□□□□ -0.23
SEC23B-202ENST00000336714 ARHGEF11O15085 1522 aa13.62□□□□□ -0.23
SEC23B-202ENST00000336714 ERICH4A6NGS2 130 aa13.61□□□□□ -0.23
SEC23B-202ENST00000336714 TMEM57Q8N5G2 664 aa13.61□□□□□ -0.23
SEC23B-202ENST00000336714 CADPSQ9ULU8 1353 aa13.61□□□□□ -0.23
SEC23B-202ENST00000336714 GTPBP4Q9BZE4 634 aaKnown RBP13.61□□□□□ -0.23
SEC23B-202ENST00000336714 SENP3Q9H4L4 574 aaPredicted RBP13.61□□□□□ -0.23
SEC23B-202ENST00000336714 KIF16BQ96L93 1317 aa13.61□□□□□ -0.23
SEC23B-202ENST00000336714 CCDC144AA2RUR9 1427 aa13.61□□□□□ -0.23
SEC23B-202ENST00000336714 HS1BP3Q53T59 392 aa13.61□□□□□ -0.23
SEC23B-202ENST00000336714 AEBP1Q8IUX7 1158 aa13.61□□□□□ -0.23
SEC23B-202ENST00000336714 COL17A1Q9UMD9 1497 aaPredicted RBP13.61□□□□□ -0.23
SEC23B-202ENST00000336714 LETM1O95202 739 aaPredicted RBP13.6□□□□□ -0.23
SEC23B-202ENST00000336714 KIF20AO95235 890 aa13.6□□□□□ -0.23
SEC23B-202ENST00000336714 EXOSC9Q06265 439 aaKnown RBP13.6□□□□□ -0.23
SEC23B-202ENST00000336714 NOLC1Q14978 699 aaKnown RBP eCLIP13.6□□□□□ -0.23
SEC23B-202ENST00000336714 VIRMAQ69YN4 1812 aaKnown RBP13.6□□□□□ -0.23
SEC23B-202ENST00000336714 NOB1Q9ULX3 412 aaKnown RBP13.6□□□□□ -0.23
SEC23B-202ENST00000336714 INSRP06213 1382 aa13.59□□□□□ -0.23
SEC23B-202ENST00000336714 PRG4Q92954 1404 aaPredicted RBP13.59□□□□□ -0.23
SEC23B-202ENST00000336714 CHD1LQ86WJ1 897 aa13.59□□□□□ -0.23
SEC23B-202ENST00000336714 SPC24Q8NBT2 197 aa13.59□□□□□ -0.23
SEC23B-202ENST00000336714 ZBTB9Q96C00 473 aa13.59□□□□□ -0.23
SEC23B-202ENST00000336714 PRAG1Q86YV5 1406 aa13.59□□□□□ -0.23
SEC23B-202ENST00000336714 U2AF1L5P0DN76 240 aaPredicted RBP13.58□□□□□ -0.23
SEC23B-202ENST00000336714 U2AF1Q01081 240 aaKnown RBP eCLIP13.58□□□□□ -0.23
SEC23B-202ENST00000336714 LRSAM1Q6UWE0 723 aa13.58□□□□□ -0.23
SEC23B-202ENST00000336714 SSH1Q8WYL5 1049 aa13.58□□□□□ -0.24
SEC23B-202ENST00000336714 NCOA3Q9Y6Q9 1424 aa13.58□□□□□ -0.24
SEC23B-202ENST00000336714 POLA1P09884 1462 aaPredicted RBP13.57□□□□□ -0.24
SEC23B-202ENST00000336714 DTNBO60941 627 aa13.57□□□□□ -0.24
SEC23B-202ENST00000336714 MORC1Q86VD1 984 aa13.57□□□□□ -0.24
SEC23B-202ENST00000336714 E9PCH4 1651 aa13.56□□□□□ -0.24
SEC23B-202ENST00000336714 U2SURPO15042 1029 aaKnown RBP13.56□□□□□ -0.24
SEC23B-202ENST00000336714 NUCB2P80303 420 aa13.56□□□□□ -0.24
SEC23B-202ENST00000336714 ELL2O00472 640 aaPredicted RBP13.56□□□□□ -0.24
SEC23B-202ENST00000336714 NAA30Q147X3 362 aaPredicted RBP13.56□□□□□ -0.24
SEC23B-202ENST00000336714 TSPY26PQ9H489 355 aa13.55□□□□□ -0.24
SEC23B-202ENST00000336714 DDX19BQ9UMR2 479 aa13.55□□□□□ -0.24
SEC23B-202ENST00000336714 CTTNBP2Q8WZ74 1663 aa13.55□□□□□ -0.24
SEC23B-202ENST00000336714 RIOK3O14730 519 aaKnown RBP13.55□□□□□ -0.24
SEC23B-202ENST00000336714 IPO4Q8TEX9 1081 aaKnown RBP13.55□□□□□ -0.24
SEC23B-202ENST00000336714 NESP48681 1621 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 169.2 ms