RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 SPINK5Q9NQ38 1064 aaPredicted RBP16.69■□□□□ 0.26
LIMK1-201ENST00000336180 MYOM1P52179 1685 aa16.69■□□□□ 0.26
LIMK1-201ENST00000336180 KDM5AP29375 1690 aaKnown RBP16.68■□□□□ 0.26
LIMK1-201ENST00000336180 PPM1GO15355 546 aaPredicted RBP16.68■□□□□ 0.26
LIMK1-201ENST00000336180 MTHFSP49914 203 aa16.68■□□□□ 0.26
LIMK1-201ENST00000336180 SKAP1Q86WV1 359 aa16.68■□□□□ 0.26
LIMK1-201ENST00000336180 CCDC136Q96JN2 1154 aa16.68■□□□□ 0.26
LIMK1-201ENST00000336180 CLTCQ00610 1675 aaKnown RBP16.67■□□□□ 0.26
LIMK1-201ENST00000336180 CABP1Q9NZU7 370 aa16.67■□□□□ 0.26
LIMK1-201ENST00000336180 CDK19Q9BWU1 502 aa16.66■□□□□ 0.26
LIMK1-201ENST00000336180 ZMYM3Q14202 1370 aa16.66■□□□□ 0.26
LIMK1-201ENST00000336180 C20orf194Q5TEA3 1177 aa16.66■□□□□ 0.26
LIMK1-201ENST00000336180 PREX1Q8TCU6 1659 aa16.65■□□□□ 0.26
LIMK1-201ENST00000336180 RRP1P56182 461 aaKnown RBP16.65■□□□□ 0.26
LIMK1-201ENST00000336180 RBM19Q9Y4C8 960 aaKnown RBP16.65■□□□□ 0.26
LIMK1-201ENST00000336180 ARHGAP31Q2M1Z3 1444 aa16.65■□□□□ 0.26
LIMK1-201ENST00000336180 SLC26A8Q96RN1 970 aa16.65■□□□□ 0.26
LIMK1-201ENST00000336180 QRICH2Q9H0J4 1663 aa16.64■□□□□ 0.26
LIMK1-201ENST00000336180 U2SURPO15042 1029 aaKnown RBP16.63■□□□□ 0.25
LIMK1-201ENST00000336180 KIAA1210Q9ULL0 1709 aa16.63■□□□□ 0.25
LIMK1-201ENST00000336180 TULP4Q9NRJ4 1543 aa16.62■□□□□ 0.25
LIMK1-201ENST00000336180 YTHDC2Q9H6S0 1430 aaKnown RBP16.62■□□□□ 0.25
LIMK1-201ENST00000336180 ZRANB1Q9UGI0 708 aa16.62■□□□□ 0.25
LIMK1-201ENST00000336180 RIMS2Q9UQ26 1411 aa16.61■□□□□ 0.25
LIMK1-201ENST00000336180 TMEM131LA2VDJ0 1609 aa16.61■□□□□ 0.25
LIMK1-201ENST00000336180 KIF13AQ9H1H9 1805 aa16.61■□□□□ 0.25
LIMK1-201ENST00000336180 A0A1W2PP64 1363 aa16.61■□□□□ 0.25
LIMK1-201ENST00000336180 ZMYM4Q5VZL5 1548 aa16.61■□□□□ 0.25
LIMK1-201ENST00000336180 CGNL1Q0VF96 1302 aa16.61■□□□□ 0.25
LIMK1-201ENST00000336180 SOX12O15370 315 aa16.6■□□□□ 0.25
LIMK1-201ENST00000336180 U2AF1L5P0DN76 240 aaPredicted RBP16.6■□□□□ 0.25
LIMK1-201ENST00000336180 U2AF1Q01081 240 aaKnown RBP eCLIP16.6■□□□□ 0.25
LIMK1-201ENST00000336180 METP08581 1390 aa16.6■□□□□ 0.25
LIMK1-201ENST00000336180 BLMP54132 1417 aaPredicted RBP16.6■□□□□ 0.25
LIMK1-201ENST00000336180 RBM33Q96EV2 1170 aaKnown RBP16.58■□□□□ 0.25
LIMK1-201ENST00000336180 CRBNQ96SW2 442 aa16.58■□□□□ 0.25
LIMK1-201ENST00000336180 A2ML1A8K2U0 1454 aa16.58■□□□□ 0.24
LIMK1-201ENST00000336180 GOLGA2Q08379 1002 aa16.58■□□□□ 0.24
LIMK1-201ENST00000336180 NEURL4Q96JN8 1562 aa16.58■□□□□ 0.24
LIMK1-201ENST00000336180 SETBP1Q9Y6X0 1596 aa16.58■□□□□ 0.24
LIMK1-201ENST00000336180 SBNO2Q9Y2G9 1366 aa16.57■□□□□ 0.24
LIMK1-201ENST00000336180 LTKP29376 864 aa16.57■□□□□ 0.24
LIMK1-201ENST00000336180 DUSP27Q5VZP5 1158 aa16.57■□□□□ 0.24
LIMK1-201ENST00000336180 BCL2L13Q9BXK5 485 aa16.56■□□□□ 0.24
LIMK1-201ENST00000336180 FYB1O15117 783 aa16.56■□□□□ 0.24
LIMK1-201ENST00000336180 BCAR3O75815 825 aa16.56■□□□□ 0.24
LIMK1-201ENST00000336180 ALKQ9UM73 1620 aa16.55■□□□□ 0.24
LIMK1-201ENST00000336180 ARHGEF28Q8N1W1 1705 aaKnown RBP16.55■□□□□ 0.24
LIMK1-201ENST00000336180 PTPRMP28827 1452 aa16.55■□□□□ 0.24
LIMK1-201ENST00000336180 TCP11L2Q8N4U5 519 aa16.55■□□□□ 0.24
LIMK1-201ENST00000336180 RNF123Q5XPI4 1314 aa16.54■□□□□ 0.24
LIMK1-201ENST00000336180 PDE3BQ13370 1112 aa16.54■□□□□ 0.24
LIMK1-201ENST00000336180 TNRQ92752 1358 aa16.54■□□□□ 0.24
LIMK1-201ENST00000336180 ZC3H13Q5T200 1668 aaKnown RBP16.54■□□□□ 0.24
LIMK1-201ENST00000336180 ANKRD36BQ8N2N9 1353 aa16.53■□□□□ 0.24
LIMK1-201ENST00000336180 NME9Q86XW9 330 aa16.53■□□□□ 0.24
LIMK1-201ENST00000336180 TERF2IPQ9NYB0 399 aa16.52■□□□□ 0.24
LIMK1-201ENST00000336180 HDGFL2Q7Z4V5 671 aaPredicted RBP16.51■□□□□ 0.23
LIMK1-201ENST00000336180 UBE2Q2Q8WVN8 375 aa16.51■□□□□ 0.23
LIMK1-201ENST00000336180 MYO3AQ8NEV4 1616 aa16.51■□□□□ 0.23
LIMK1-201ENST00000336180 SLFN5Q08AF3 891 aa16.51■□□□□ 0.23
LIMK1-201ENST00000336180 NPC1L1Q9UHC9 1359 aa16.5■□□□□ 0.23
LIMK1-201ENST00000336180 ARHGEF40Q8TER5 1519 aa16.5■□□□□ 0.23
LIMK1-201ENST00000336180 CFAP53Q96M91 514 aa16.5■□□□□ 0.23
LIMK1-201ENST00000336180 FRAT1Q92837 279 aaPredicted RBP16.5■□□□□ 0.23
LIMK1-201ENST00000336180 WWC1Q8IX03 1113 aa16.49■□□□□ 0.23
LIMK1-201ENST00000336180 HMOX1P09601 288 aa16.49■□□□□ 0.23
LIMK1-201ENST00000336180 RRS1Q15050 365 aaKnown RBP16.49■□□□□ 0.23
LIMK1-201ENST00000336180 TNNQ9UQP3 1299 aa16.48■□□□□ 0.23
LIMK1-201ENST00000336180 AGLP35573 1532 aa16.48■□□□□ 0.23
LIMK1-201ENST00000336180 ZFYVE9O95405 1425 aa16.48■□□□□ 0.23
LIMK1-201ENST00000336180 ZNF521Q96K83 1311 aa16.48■□□□□ 0.23
LIMK1-201ENST00000336180 EMILIN1Q9Y6C2 1016 aa16.48■□□□□ 0.23
LIMK1-201ENST00000336180 ERICH6BQ5W0A0 696 aa16.47■□□□□ 0.23
LIMK1-201ENST00000336180 PMFBP1Q8TBY8 1022 aa16.47■□□□□ 0.23
LIMK1-201ENST00000336180 TSR2Q969E8 191 aaKnown RBP16.47■□□□□ 0.23
LIMK1-201ENST00000336180 NUDT16Q96DE0 195 aaKnown RBP16.47■□□□□ 0.23
LIMK1-201ENST00000336180 PPP6R1Q9UPN7 881 aa16.47■□□□□ 0.23
LIMK1-201ENST00000336180 WASLO00401 505 aaPredicted RBP16.47■□□□□ 0.23
LIMK1-201ENST00000336180 RUNDC1Q96C34 613 aa16.46■□□□□ 0.23
LIMK1-201ENST00000336180 POLR3AO14802 1390 aaPredicted RBP16.45■□□□□ 0.22
LIMK1-201ENST00000336180 SPATA31D1Q6ZQQ2 1576 aa16.45■□□□□ 0.22
LIMK1-201ENST00000336180 CLUAP1Q96AJ1 413 aa16.45■□□□□ 0.22
LIMK1-201ENST00000336180 ATAD2Q6PL18 1390 aa16.45■□□□□ 0.22
LIMK1-201ENST00000336180 CANXP27824 592 aaKnown RBP16.44■□□□□ 0.22
LIMK1-201ENST00000336180 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.44■□□□□ 0.22
LIMK1-201ENST00000336180 LAS1LQ9Y4W2 734 aaKnown RBP16.44■□□□□ 0.22
LIMK1-201ENST00000336180 ROBO2Q9HCK4 1378 aa16.44■□□□□ 0.22
LIMK1-201ENST00000336180 CD163L1Q9NR16 1453 aa16.44■□□□□ 0.22
LIMK1-201ENST00000336180 PRR36Q9H6K5 1346 aa16.43■□□□□ 0.22
LIMK1-201ENST00000336180 TMEM2Q9UHN6 1383 aa16.43■□□□□ 0.22
LIMK1-201ENST00000336180 PANK1Q8TE04 598 aa16.43■□□□□ 0.22
LIMK1-201ENST00000336180 THUMPD2Q9BTF0 503 aaKnown RBP16.43■□□□□ 0.22
LIMK1-201ENST00000336180 NUTM2GQ5VZR2 741 aa16.43■□□□□ 0.22
LIMK1-201ENST00000336180 ABCC11Q96J66 1382 aa16.42■□□□□ 0.22
LIMK1-201ENST00000336180 NPM2Q86SE8 214 aaKnown RBP16.42■□□□□ 0.22
LIMK1-201ENST00000336180 PPIP5K1Q6PFW1 1433 aa16.42■□□□□ 0.22
LIMK1-201ENST00000336180 AMOTL2Q9Y2J4 779 aa16.41■□□□□ 0.22
LIMK1-201ENST00000336180 E9PSI1 815 aa16.4■□□□□ 0.22
LIMK1-201ENST00000336180 COG6Q9Y2V7 657 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms