RNA–Protein interactions for RNA: ENST00000335922.9

FGFR1-202, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 1 (best) BASIC

Gene FGFR1, Length 4,157 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-202ENST00000335922 SYCP2Q9BX26 1530 aa18.26■□□□□ 0.51
FGFR1-202ENST00000335922 FOXD4L6Q3SYB3 417 aaPredicted RBP18.26■□□□□ 0.51
FGFR1-202ENST00000335922 FOXD4L3Q6VB84 417 aaPredicted RBP18.26■□□□□ 0.51
FGFR1-202ENST00000335922 STK31Q9BXU1 1019 aa18.26■□□□□ 0.51
FGFR1-202ENST00000335922 TARBP1Q13395 1621 aaKnown RBP18.26■□□□□ 0.51
FGFR1-202ENST00000335922 IPO8O15397 1037 aaKnown RBP18.25■□□□□ 0.51
FGFR1-202ENST00000335922 DZIP1LQ8IYY4 767 aaKnown RBP18.25■□□□□ 0.51
FGFR1-202ENST00000335922 ABCC2Q92887 1545 aa18.25■□□□□ 0.51
FGFR1-202ENST00000335922 TEFQ10587 303 aa18.25■□□□□ 0.51
FGFR1-202ENST00000335922 DUSP27Q5VZP5 1158 aa18.25■□□□□ 0.51
FGFR1-202ENST00000335922 NECTIN2Q92692 538 aa18.25■□□□□ 0.51
FGFR1-202ENST00000335922 CEP170Q5SW79 1584 aa18.25■□□□□ 0.51
FGFR1-202ENST00000335922 PBRM1Q86U86 1689 aa18.24■□□□□ 0.51
FGFR1-202ENST00000335922 NGEFQ8N5V2 710 aa18.24■□□□□ 0.51
FGFR1-202ENST00000335922 SLFN5Q08AF3 891 aa18.23■□□□□ 0.51
FGFR1-202ENST00000335922 RPGRIP1LQ68CZ1 1315 aa18.23■□□□□ 0.51
FGFR1-202ENST00000335922 C1orf141Q5JVX7 400 aa18.23■□□□□ 0.51
FGFR1-202ENST00000335922 MEX3CQ5U5Q3 659 aaKnown RBP18.23■□□□□ 0.51
FGFR1-202ENST00000335922 RUNDC1Q96C34 613 aa18.23■□□□□ 0.51
FGFR1-202ENST00000335922 NUTM2BA6NNL0 878 aaPredicted RBP18.23■□□□□ 0.51
FGFR1-202ENST00000335922 NUTM2EB1AL46 878 aaPredicted RBP18.23■□□□□ 0.51
FGFR1-202ENST00000335922 AMER1Q5JTC6 1135 aaPredicted RBP18.23■□□□□ 0.51
FGFR1-202ENST00000335922 NUTM2AQ8IVF1 878 aaPredicted RBP18.23■□□□□ 0.51
FGFR1-202ENST00000335922 AMOTL2Q9Y2J4 779 aa18.22■□□□□ 0.51
FGFR1-202ENST00000335922 IGHDP01880 384 aa18.22■□□□□ 0.51
FGFR1-202ENST00000335922 MSNP26038 577 aaKnown RBP18.22■□□□□ 0.51
FGFR1-202ENST00000335922 HSPA2P54652 639 aa18.22■□□□□ 0.51
FGFR1-202ENST00000335922 GPRASP1Q5JY77 1395 aa18.22■□□□□ 0.51
FGFR1-202ENST00000335922 RIPK4P57078 832 aa18.22■□□□□ 0.51
FGFR1-202ENST00000335922 C22orf23Q9BZE7 217 aa18.21■□□□□ 0.51
FGFR1-202ENST00000335922 C1orf115Q9H7X2 142 aa18.21■□□□□ 0.51
FGFR1-202ENST00000335922 STRN4Q9NRL3 753 aa18.21■□□□□ 0.51
FGFR1-202ENST00000335922 EXOSC9Q06265 439 aaKnown RBP18.2■□□□□ 0.5
FGFR1-202ENST00000335922 RTEL1-TNFRSF6BF6WH68 1400 aa18.2■□□□□ 0.5
FGFR1-202ENST00000335922 LMOD3Q0VAK6 560 aa18.2■□□□□ 0.5
FGFR1-202ENST00000335922 EIF2S2P20042 333 aaKnown RBP18.2■□□□□ 0.5
FGFR1-202ENST00000335922 GBP4Q96PP9 640 aa18.19■□□□□ 0.5
FGFR1-202ENST00000335922 TAOK2Q9UL54 1235 aa18.19■□□□□ 0.5
FGFR1-202ENST00000335922 CFAP43Q8NDM7 1665 aa18.19■□□□□ 0.5
FGFR1-202ENST00000335922 KDM5BQ9UGL1 1544 aa18.19■□□□□ 0.5
FGFR1-202ENST00000335922 FOXO3O43524 673 aa18.19■□□□□ 0.5
FGFR1-202ENST00000335922 CASC1Q6TDU7 716 aa18.18■□□□□ 0.5
FGFR1-202ENST00000335922 RAPGEF4Q8WZA2 1011 aa18.18■□□□□ 0.5
FGFR1-202ENST00000335922 NUDT16Q96DE0 195 aaKnown RBP18.18■□□□□ 0.5
FGFR1-202ENST00000335922 TNNQ9UQP3 1299 aa18.18■□□□□ 0.5
FGFR1-202ENST00000335922 A2MP01023 1474 aa18.18■□□□□ 0.5
FGFR1-202ENST00000335922 CHMP3Q9Y3E7 222 aa18.18■□□□□ 0.5
FGFR1-202ENST00000335922 CCDC61Q9Y6R9 512 aa18.18■□□□□ 0.5
FGFR1-202ENST00000335922 ZC3H6P61129 1189 aaKnown RBP18.17■□□□□ 0.5
FGFR1-202ENST00000335922 WWC1Q8IX03 1113 aa18.17■□□□□ 0.5
FGFR1-202ENST00000335922 SPINK5Q9NQ38 1064 aaPredicted RBP18.17■□□□□ 0.5
FGFR1-202ENST00000335922 VSIG10Q8N0Z9 540 aa18.17■□□□□ 0.5
FGFR1-202ENST00000335922 RRS1Q15050 365 aaKnown RBP18.16■□□□□ 0.5
FGFR1-202ENST00000335922 NOS1P29475 1434 aa18.16■□□□□ 0.5
FGFR1-202ENST00000335922 TEX14Q8IWB6 1497 aa18.16■□□□□ 0.5
FGFR1-202ENST00000335922 KDM6BO15054 1643 aa18.16■□□□□ 0.5
FGFR1-202ENST00000335922 CHMP4BQ9H444 224 aaKnown RBP18.16■□□□□ 0.5
FGFR1-202ENST00000335922 ZNF518AQ6AHZ1 1483 aa18.15■□□□□ 0.5
FGFR1-202ENST00000335922 MAGI3Q5TCQ9 1506 aa18.15■□□□□ 0.5
FGFR1-202ENST00000335922 DDX49Q9Y6V7 483 aaKnown RBP18.13■□□□□ 0.49
FGFR1-202ENST00000335922 PER1O15534 1290 aaPredicted RBP18.13■□□□□ 0.49
FGFR1-202ENST00000335922 CHMP5Q9NZZ3 219 aa18.12■□□□□ 0.49
FGFR1-202ENST00000335922 SEC24BO95487 1268 aa18.12■□□□□ 0.49
FGFR1-202ENST00000335922 TNRQ92752 1358 aa18.12■□□□□ 0.49
FGFR1-202ENST00000335922 PDE3AQ14432 1141 aa18.12■□□□□ 0.49
FGFR1-202ENST00000335922 PLEKHH1Q9ULM0 1364 aa18.12■□□□□ 0.49
FGFR1-202ENST00000335922 TESK2Q96S53 571 aa18.11■□□□□ 0.49
FGFR1-202ENST00000335922 DDX19BQ9UMR2 479 aa18.11■□□□□ 0.49
FGFR1-202ENST00000335922 TRAK2O60296 914 aa18.11■□□□□ 0.49
FGFR1-202ENST00000335922 GTF2E1P29083 439 aaPredicted RBP18.11■□□□□ 0.49
FGFR1-202ENST00000335922 PRKAR2BP31323 418 aa18.11■□□□□ 0.49
FGFR1-202ENST00000335922 PRDM11Q9NQV5 511 aa18.1■□□□□ 0.49
FGFR1-202ENST00000335922 C8orf34Q49A92 452 aa18.1■□□□□ 0.49
FGFR1-202ENST00000335922 TTC5Q8N0Z6 440 aa18.1■□□□□ 0.49
FGFR1-202ENST00000335922 NOB1Q9ULX3 412 aaKnown RBP18.1■□□□□ 0.49
FGFR1-202ENST00000335922 HSP90AA2PQ14568 343 aaPredicted RBP18.09■□□□□ 0.49
FGFR1-202ENST00000335922 ZNF692Q9BU19 519 aaPredicted RBP18.09■□□□□ 0.49
FGFR1-202ENST00000335922 SULT6B1Q6IMI4 303 aa18.09■□□□□ 0.49
FGFR1-202ENST00000335922 DMRT2Q9Y5R5 561 aa18.09■□□□□ 0.49
FGFR1-202ENST00000335922 THUMPD2Q9BTF0 503 aaKnown RBP18.09■□□□□ 0.49
FGFR1-202ENST00000335922 PPP6R1Q9UPN7 881 aa18.09■□□□□ 0.49
FGFR1-202ENST00000335922 PZPP20742 1482 aa18.08■□□□□ 0.48
FGFR1-202ENST00000335922 TRIM6-TRIM34B2RNG4 842 aa18.08■□□□□ 0.48
FGFR1-202ENST00000335922 ABCC10Q5T3U5 1492 aa18.07■□□□□ 0.48
FGFR1-202ENST00000335922 KCNJ4P48050 445 aa18.07■□□□□ 0.48
FGFR1-202ENST00000335922 RARSP54136 660 aaKnown RBP18.07■□□□□ 0.48
FGFR1-202ENST00000335922 RSPH6AQ9H0K4 717 aa18.07■□□□□ 0.48
FGFR1-202ENST00000335922 PRKCSHP14314 528 aaPredicted RBP18.06■□□□□ 0.48
FGFR1-202ENST00000335922 RNF123Q5XPI4 1314 aa18.06■□□□□ 0.48
FGFR1-202ENST00000335922 PARD3Q8TEW0 1356 aa18.06■□□□□ 0.48
FGFR1-202ENST00000335922 NME9Q86XW9 330 aa18.06■□□□□ 0.48
FGFR1-202ENST00000335922 PCDHB15Q9Y5E8 787 aa18.06■□□□□ 0.48
FGFR1-202ENST00000335922 SPATA31E1Q6ZUB1 1445 aa18.06■□□□□ 0.48
FGFR1-202ENST00000335922 FBLN1P23142 703 aa18.05■□□□□ 0.48
FGFR1-202ENST00000335922 C14orf93Q9H972 538 aaKnown RBP18.05■□□□□ 0.48
FGFR1-202ENST00000335922 TSPYL4Q9UJ04 414 aa18.05■□□□□ 0.48
FGFR1-202ENST00000335922 DDX11L8A8MPP1 907 aa18.05■□□□□ 0.48
FGFR1-202ENST00000335922 TOM1L2Q6ZVM7 507 aa18.05■□□□□ 0.48
FGFR1-202ENST00000335922 TBC1D2Q9BYX2 928 aa18.04■□□□□ 0.48
FGFR1-202ENST00000335922 TCOF1Q13428 1488 aaKnown RBP18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms