RNA–Protein interactions for RNA: ENST00000334082.10

HOMER1-202, Transcript of homer scaffold protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOMER1, Length 5,881 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER1-202ENST00000334082 PANK3Q9H999 370 aa26.27■■□□□ 1.8
HOMER1-202ENST00000334082 CCDC112Q8NEF3 446 aa26.27■■□□□ 1.8
HOMER1-202ENST00000334082 SPC24Q8NBT2 197 aa26.27■■□□□ 1.8
HOMER1-202ENST00000334082 CCDC43Q96MW1 224 aaKnown RBP26.27■■□□□ 1.8
HOMER1-202ENST00000334082 C9orf78Q9NZ63 289 aaPredicted RBP26.26■■□□□ 1.79
HOMER1-202ENST00000334082 ROCK1Q13464 1354 aa26.26■■□□□ 1.79
HOMER1-202ENST00000334082 FMN1Q68DA7 1419 aa26.25■■□□□ 1.79
HOMER1-202ENST00000334082 VPS8Q8N3P4 1428 aa26.25■■□□□ 1.79
HOMER1-202ENST00000334082 EIF3JO75822 258 aaKnown RBP26.25■■□□□ 1.79
HOMER1-202ENST00000334082 INCENPQ9NQS7 918 aa26.25■■□□□ 1.79
HOMER1-202ENST00000334082 API5Q9BZZ5 524 aaKnown RBP26.24■■□□□ 1.79
HOMER1-202ENST00000334082 PRPF40AO75400 957 aaKnown RBP26.24■■□□□ 1.79
HOMER1-202ENST00000334082 CTDP1Q9Y5B0 961 aaPredicted RBP26.24■■□□□ 1.79
HOMER1-202ENST00000334082 ERLIN2O94905 339 aa26.24■■□□□ 1.79
HOMER1-202ENST00000334082 FILIP1LQ4L180 1135 aa26.24■■□□□ 1.79
HOMER1-202ENST00000334082 DHX37Q8IY37 1157 aaKnown RBP26.24■■□□□ 1.79
HOMER1-202ENST00000334082 CDC45O75419 566 aa26.23■■□□□ 1.79
HOMER1-202ENST00000334082 LNPKQ9C0E8 428 aa26.23■■□□□ 1.79
HOMER1-202ENST00000334082 CCDC27Q2M243 656 aa26.23■■□□□ 1.79
HOMER1-202ENST00000334082 TRIM34Q9BYJ4 488 aa26.23■■□□□ 1.79
HOMER1-202ENST00000334082 NEFHP12036 1026 aa26.23■■□□□ 1.79
HOMER1-202ENST00000334082 ERICH4A6NGS2 130 aa26.23■■□□□ 1.79
HOMER1-202ENST00000334082 DYDC1Q8WWB3 177 aa26.22■■□□□ 1.79
HOMER1-202ENST00000334082 ERLIN1O75477 346 aa26.22■■□□□ 1.79
HOMER1-202ENST00000334082 EFCAB2Q5VUJ9 269 aa26.22■■□□□ 1.79
HOMER1-202ENST00000334082 KINO60870 393 aaKnown RBP26.21■■□□□ 1.79
HOMER1-202ENST00000334082 APAF1O14727 1248 aa26.2■■□□□ 1.79
HOMER1-202ENST00000334082 NGDNQ8NEJ9 315 aaKnown RBP26.2■■□□□ 1.79
HOMER1-202ENST00000334082 CNKSR2Q8WXI2 1034 aa26.2■■□□□ 1.78
HOMER1-202ENST00000334082 TDRD9Q8NDG6 1382 aaKnown RBP26.19■■□□□ 1.78
HOMER1-202ENST00000334082 FMNL2Q96PY5 1086 aa26.19■■□□□ 1.78
HOMER1-202ENST00000334082 G3BP1Q13283 466 aaKnown RBP eCLIP26.19■■□□□ 1.78
HOMER1-202ENST00000334082 BRMS1Q9HCU9 246 aa26.19■■□□□ 1.78
HOMER1-202ENST00000334082 ERC2O15083 957 aa26.18■■□□□ 1.78
HOMER1-202ENST00000334082 GIMAP7Q8NHV1 300 aa26.18■■□□□ 1.78
HOMER1-202ENST00000334082 ENOX2Q16206 610 aaKnown RBP26.18■■□□□ 1.78
HOMER1-202ENST00000334082 ANKRD30AQ9BXX3 1397 aa26.18■■□□□ 1.78
HOMER1-202ENST00000334082 STK11IPQ8N1F8 1099 aa26.17■■□□□ 1.78
HOMER1-202ENST00000334082 CENPHQ9H3R5 247 aa26.17■■□□□ 1.78
HOMER1-202ENST00000334082 DHX8Q14562 1220 aaKnown RBP26.17■■□□□ 1.78
HOMER1-202ENST00000334082 KIF7Q2M1P5 1343 aa26.16■■□□□ 1.78
HOMER1-202ENST00000334082 RALYLQ86SE5 291 aaKnown RBP26.16■■□□□ 1.78
HOMER1-202ENST00000334082 BRPF1P55201 1214 aaPredicted RBP26.16■■□□□ 1.78
HOMER1-202ENST00000334082 GRPEL1Q9HAV7 217 aa26.16■■□□□ 1.78
HOMER1-202ENST00000334082 MAGEC2Q9UBF1 373 aaPredicted RBP26.16■■□□□ 1.78
HOMER1-202ENST00000334082 CCDC88BA6NC98 1476 aa26.16■■□□□ 1.78
HOMER1-202ENST00000334082 EIF2S2P20042 333 aaKnown RBP26.15■■□□□ 1.78
HOMER1-202ENST00000334082 PSMA5P28066 241 aa26.15■■□□□ 1.78
HOMER1-202ENST00000334082 C1orf141Q5JVX7 400 aa26.15■■□□□ 1.78
HOMER1-202ENST00000334082 KRI1Q8N9T8 703 aaKnown RBP26.15■■□□□ 1.78
HOMER1-202ENST00000334082 PDS5BQ9NTI5 1447 aa26.15■■□□□ 1.78
HOMER1-202ENST00000334082 ANKRD62A6NC57 917 aa26.15■■□□□ 1.78
HOMER1-202ENST00000334082 SEPT7Q16181 437 aaKnown RBP26.15■■□□□ 1.78
HOMER1-202ENST00000334082 ST20-MTHFSA0A0A6YYL1 179 aa26.13■■□□□ 1.77
HOMER1-202ENST00000334082 CCDC181Q5TID7 509 aa26.13■■□□□ 1.77
HOMER1-202ENST00000334082 ABCC8Q09428 1581 aa26.12■■□□□ 1.77
HOMER1-202ENST00000334082 HSP90AB4PQ58FF6 505 aa26.12■■□□□ 1.77
HOMER1-202ENST00000334082 NGEFQ8N5V2 710 aa26.12■■□□□ 1.77
HOMER1-202ENST00000334082 XBP1P17861 261 aa26.12■■□□□ 1.77
HOMER1-202ENST00000334082 ANKRD18AQ8IVF6 992 aa26.12■■□□□ 1.77
HOMER1-202ENST00000334082 FAM193AP78312 1265 aa26.12■■□□□ 1.77
HOMER1-202ENST00000334082 AAMPQ13685 434 aa26.11■■□□□ 1.77
HOMER1-202ENST00000334082 SERPINC1P01008 464 aa26.11■■□□□ 1.77
HOMER1-202ENST00000334082 KIF3BO15066 747 aa26.1■■□□□ 1.77
HOMER1-202ENST00000334082 RABEP1Q15276 862 aa26.1■■□□□ 1.77
HOMER1-202ENST00000334082 ZNHIT6Q9NWK9 470 aaKnown RBP26.1■■□□□ 1.77
HOMER1-202ENST00000334082 TEFQ10587 303 aa26.1■■□□□ 1.77
HOMER1-202ENST00000334082 CCDC192P0DO97 292 aa26.1■■□□□ 1.77
HOMER1-202ENST00000334082 NINLQ9Y2I6 1382 aa26.1■■□□□ 1.77
HOMER1-202ENST00000334082 TAX1BP1Q86VP1 789 aa26.1■■□□□ 1.77
HOMER1-202ENST00000334082 FIBPO43427 364 aa26.09■■□□□ 1.77
HOMER1-202ENST00000334082 PDCL2Q8N4E4 241 aa26.09■■□□□ 1.77
HOMER1-202ENST00000334082 PIP4K2AP48426 406 aaPredicted RBP26.09■■□□□ 1.77
HOMER1-202ENST00000334082 NECTIN2Q92692 538 aa26.09■■□□□ 1.77
HOMER1-202ENST00000334082 CCDC102AQ96A19 550 aa26.08■■□□□ 1.77
HOMER1-202ENST00000334082 MPNDQ8N594 471 aa26.08■■□□□ 1.77
HOMER1-202ENST00000334082 VPS37DQ86XT2 251 aa26.08■■□□□ 1.76
HOMER1-202ENST00000334082 FKBP5Q13451 457 aaPredicted RBP26.07■■□□□ 1.76
HOMER1-202ENST00000334082 LRRCC1Q9C099 1032 aa26.07■■□□□ 1.76
HOMER1-202ENST00000334082 PPFIBP1Q86W92 1011 aa26.07■■□□□ 1.76
HOMER1-202ENST00000334082 ZNF396Q96N95 335 aaPredicted RBP26.07■■□□□ 1.76
HOMER1-202ENST00000334082 TRAK1Q9UPV9 953 aa26.07■■□□□ 1.76
HOMER1-202ENST00000334082 ESPNB1AK53 854 aa26.06■■□□□ 1.76
HOMER1-202ENST00000334082 MCM2P49736 904 aa26.06■■□□□ 1.76
HOMER1-202ENST00000334082 AEBP1Q8IUX7 1158 aa26.06■■□□□ 1.76
HOMER1-202ENST00000334082 NUTM2DQ5VT03 806 aaPredicted RBP26.06■■□□□ 1.76
HOMER1-202ENST00000334082 COG3Q96JB2 828 aa26.06■■□□□ 1.76
HOMER1-202ENST00000334082 MROH2BQ7Z745 1585 aa26.06■■□□□ 1.76
HOMER1-202ENST00000334082 FAM177A1Q8N128 213 aaPredicted RBP26.06■■□□□ 1.76
HOMER1-202ENST00000334082 RIPK4P57078 832 aa26.05■■□□□ 1.76
HOMER1-202ENST00000334082 SYCP1Q15431 976 aa26.05■■□□□ 1.76
HOMER1-202ENST00000334082 PDCP20941 246 aa26.05■■□□□ 1.76
HOMER1-202ENST00000334082 KDM4AO75164 1064 aa26.05■■□□□ 1.76
HOMER1-202ENST00000334082 DDX58O95786 925 aaKnown RBP26.05■■□□□ 1.76
HOMER1-202ENST00000334082 HNRNPMP52272 730 aaKnown RBP eCLIP26.04■■□□□ 1.76
HOMER1-202ENST00000334082 TTC5Q8N0Z6 440 aa26.04■■□□□ 1.76
HOMER1-202ENST00000334082 NEK4P51957 841 aa26.04■■□□□ 1.76
HOMER1-202ENST00000334082 EZRP15311 586 aaKnown RBP26.04■■□□□ 1.76
HOMER1-202ENST00000334082 PANK1Q8TE04 598 aa26.04■■□□□ 1.76
HOMER1-202ENST00000334082 PRDM10Q9NQV6 1147 aa26.04■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms