RNA–Protein interactions for RNA: ENST00000333617.8

LSAMP-201, Transcript of limbic system associated membrane protein, humanhuman

TSL 2

Gene LSAMP, Length 1,561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-201ENST00000333617 CNTLNQ9NXG0 1405 aa12.13□□□□□ -0.47
LSAMP-201ENST00000333617 HECW2Q9P2P5 1572 aa12.13□□□□□ -0.47
LSAMP-201ENST00000333617 PRDM15P57071 1507 aaPredicted RBP12.13□□□□□ -0.47
LSAMP-201ENST00000333617 MICALL2Q8IY33 904 aa12.13□□□□□ -0.47
LSAMP-201ENST00000333617 KIF1BO60333 1816 aa12.13□□□□□ -0.47
LSAMP-201ENST00000333617 MROH1Q8NDA8 1641 aa12.13□□□□□ -0.47
LSAMP-201ENST00000333617 MAP3K4Q9Y6R4 1608 aa12.13□□□□□ -0.47
LSAMP-201ENST00000333617 KANK1Q14678 1352 aa12.12□□□□□ -0.47
LSAMP-201ENST00000333617 TRPM2O94759 1503 aa12.12□□□□□ -0.47
LSAMP-201ENST00000333617 LAMC1P11047 1609 aa12.12□□□□□ -0.47
LSAMP-201ENST00000333617 KDM2AQ9Y2K7 1162 aa12.12□□□□□ -0.47
LSAMP-201ENST00000333617 GTF3C3Q9Y5Q9 886 aa12.12□□□□□ -0.47
LSAMP-201ENST00000333617 DHX29Q7Z478 1369 aaKnown RBP12.12□□□□□ -0.47
LSAMP-201ENST00000333617 RNF17Q9BXT8 1623 aaKnown RBP12.11□□□□□ -0.47
LSAMP-201ENST00000333617 C11orf95C9JLR9 678 aaPredicted RBP12.11□□□□□ -0.47
LSAMP-201ENST00000333617 POGZQ7Z3K3 1410 aa12.11□□□□□ -0.47
LSAMP-201ENST00000333617 FBXO22Q8NEZ5 403 aa12.11□□□□□ -0.47
LSAMP-201ENST00000333617 A2MP01023 1474 aa12.11□□□□□ -0.47
LSAMP-201ENST00000333617 NEO1Q92859 1461 aa12.11□□□□□ -0.47
LSAMP-201ENST00000333617 RICTORQ6R327 1708 aa12.1□□□□□ -0.47
LSAMP-201ENST00000333617 PRAG1Q86YV5 1406 aa12.1□□□□□ -0.47
LSAMP-201ENST00000333617 CARD11Q9BXL7 1154 aa12.09□□□□□ -0.47
LSAMP-201ENST00000333617 MFRPQ9BY79 579 aa12.09□□□□□ -0.47
LSAMP-201ENST00000333617 CLTCL1P53675 1640 aa12.09□□□□□ -0.47
LSAMP-201ENST00000333617 MLH3Q9UHC1 1453 aa12.09□□□□□ -0.47
LSAMP-201ENST00000333617 ABCA6Q8N139 1617 aa12.09□□□□□ -0.47
LSAMP-201ENST00000333617 KIF3BO15066 747 aa12.09□□□□□ -0.47
LSAMP-201ENST00000333617 GLI2P10070 1586 aa12.08□□□□□ -0.47
LSAMP-201ENST00000333617 KIF7Q2M1P5 1343 aa12.08□□□□□ -0.48
LSAMP-201ENST00000333617 RGL3Q3MIN7 710 aa12.08□□□□□ -0.48
LSAMP-201ENST00000333617 TSPOAP1O95153 1857 aa12.08□□□□□ -0.48
LSAMP-201ENST00000333617 PTPRTO14522 1441 aa12.07□□□□□ -0.48
LSAMP-201ENST00000333617 PPRC1Q5VV67 1664 aaKnown RBP12.07□□□□□ -0.48
LSAMP-201ENST00000333617 ROCK2O75116 1388 aaKnown RBP12.07□□□□□ -0.48
LSAMP-201ENST00000333617 EFCAB6Q5THR3 1501 aa12.07□□□□□ -0.48
LSAMP-201ENST00000333617 CYB5RLQ6IPT4 315 aa12.06□□□□□ -0.48
LSAMP-201ENST00000333617 ARID4BQ4LE39 1312 aaPredicted RBP12.06□□□□□ -0.48
LSAMP-201ENST00000333617 FRMPD1Q5SYB0 1578 aa12.05□□□□□ -0.48
LSAMP-201ENST00000333617 MADDQ8WXG6 1647 aa12.05□□□□□ -0.48
LSAMP-201ENST00000333617 LMTK2Q8IWU2 1503 aa12.05□□□□□ -0.48
LSAMP-201ENST00000333617 NEURL4Q96JN8 1562 aa12.04□□□□□ -0.48
LSAMP-201ENST00000333617 IFT172Q9UG01 1749 aa12.04□□□□□ -0.48
LSAMP-201ENST00000333617 GPRASP1Q5JY77 1395 aa12.03□□□□□ -0.48
LSAMP-201ENST00000333617 KIAA1210Q9ULL0 1709 aa12.03□□□□□ -0.48
LSAMP-201ENST00000333617 DIP2BQ9P265 1576 aa12.03□□□□□ -0.48
LSAMP-201ENST00000333617 HS6ST3Q8IZP7 471 aa12.03□□□□□ -0.48
LSAMP-201ENST00000333617 DIP2CQ9Y2E4 1556 aa12.03□□□□□ -0.48
LSAMP-201ENST00000333617 IQGAP1P46940 1657 aa12.02□□□□□ -0.49
LSAMP-201ENST00000333617 ST20-MTHFSA0A0A6YYL1 179 aa12.01□□□□□ -0.49
LSAMP-201ENST00000333617 MROH2AA6NES4 1674 aa12.01□□□□□ -0.49
LSAMP-201ENST00000333617 CAMSAP1Q5T5Y3 1602 aa12□□□□□ -0.49
LSAMP-201ENST00000333617 ZC3H13Q5T200 1668 aaKnown RBP12□□□□□ -0.49
LSAMP-201ENST00000333617 TMEM92Q6UXU6 159 aa12□□□□□ -0.49
LSAMP-201ENST00000333617 POLR3GLQ9BT43 218 aa12□□□□□ -0.49
LSAMP-201ENST00000333617 PRKRIP1Q9H875 184 aaPredicted RBP12□□□□□ -0.49
LSAMP-201ENST00000333617 NBPF1Q3BBV0 1214 aa11.99□□□□□ -0.49
LSAMP-201ENST00000333617 STAC3Q96MF2 364 aa11.99□□□□□ -0.49
LSAMP-201ENST00000333617 KRTAP3-3Q9BYR6 98 aa11.99□□□□□ -0.49
LSAMP-201ENST00000333617 KRTAP3-2Q9BYR7 98 aa11.99□□□□□ -0.49
LSAMP-201ENST00000333617 KIF13AQ9H1H9 1805 aa11.98□□□□□ -0.49
LSAMP-201ENST00000333617 RAPGEF3O95398 923 aa11.98□□□□□ -0.49
LSAMP-201ENST00000333617 CHGAP10645 457 aaKnown RBP11.98□□□□□ -0.49
LSAMP-201ENST00000333617 HOXB3P14651 431 aaPredicted RBP11.98□□□□□ -0.49
LSAMP-201ENST00000333617 DOK7Q18PE1 504 aa11.98□□□□□ -0.49
LSAMP-201ENST00000333617 MARVELD3Q96A59 401 aa11.98□□□□□ -0.49
LSAMP-201ENST00000333617 UGGT1Q9NYU2 1555 aa11.98□□□□□ -0.49
LSAMP-201ENST00000333617 PPLO60437 1756 aa11.98□□□□□ -0.49
LSAMP-201ENST00000333617 ABCC3O15438 1527 aa11.97□□□□□ -0.49
LSAMP-201ENST00000333617 SIGLEC1Q9BZZ2 1709 aa11.97□□□□□ -0.49
LSAMP-201ENST00000333617 ZMYM4Q5VZL5 1548 aa11.96□□□□□ -0.49
LSAMP-201ENST00000333617 GGT6Q6P531 493 aa11.96□□□□□ -0.5
LSAMP-201ENST00000333617 ZNF710Q8N1W2 664 aa11.96□□□□□ -0.5
LSAMP-201ENST00000333617 EMP3P54852 163 aa11.95□□□□□ -0.5
LSAMP-201ENST00000333617 FAM69CQ0P6D2 419 aa11.95□□□□□ -0.5
LSAMP-201ENST00000333617 ADGRB3O60242 1522 aa11.95□□□□□ -0.5
LSAMP-201ENST00000333617 MYOM2P54296 1465 aa11.94□□□□□ -0.5
LSAMP-201ENST00000333617 COL17A1Q9UMD9 1497 aaPredicted RBP11.94□□□□□ -0.5
LSAMP-201ENST00000333617 NPATQ14207 1427 aa11.94□□□□□ -0.5
LSAMP-201ENST00000333617 WASHC2CQ9Y4E1 1318 aa11.93□□□□□ -0.5
LSAMP-201ENST00000333617 MYO5BQ9ULV0 1848 aa11.93□□□□□ -0.5
LSAMP-201ENST00000333617 RIMBP2O15034 1052 aa11.93□□□□□ -0.5
LSAMP-201ENST00000333617 YEATS2Q9ULM3 1422 aa11.92□□□□□ -0.5
LSAMP-201ENST00000333617 PIK3C2BO00750 1634 aa11.92□□□□□ -0.5
LSAMP-201ENST00000333617 SCAF11Q99590 1463 aaKnown RBP11.91□□□□□ -0.5
LSAMP-201ENST00000333617 CCDC184Q52MB2 194 aa11.91□□□□□ -0.5
LSAMP-201ENST00000333617 TESK2Q96S53 571 aa11.91□□□□□ -0.5
LSAMP-201ENST00000333617 MRS2Q9HD23 443 aa11.91□□□□□ -0.5
LSAMP-201ENST00000333617 PREX1Q8TCU6 1659 aa11.91□□□□□ -0.5
LSAMP-201ENST00000333617 SYNMO15061 1565 aa11.9□□□□□ -0.5
LSAMP-201ENST00000333617 KDM5AP29375 1690 aaKnown RBP11.89□□□□□ -0.51
LSAMP-201ENST00000333617 HOXB1P14653 301 aaPredicted RBP11.89□□□□□ -0.51
LSAMP-201ENST00000333617 TMF1P82094 1093 aa11.89□□□□□ -0.51
LSAMP-201ENST00000333617 HNRNPUQ00839 825 aaKnown RBP eCLIP11.89□□□□□ -0.51
LSAMP-201ENST00000333617 DISP3Q9P2K9 1392 aa11.89□□□□□ -0.51
LSAMP-201ENST00000333617 NRXN1Q9ULB1 1477 aa11.89□□□□□ -0.51
LSAMP-201ENST00000333617 REREQ9P2R6 1566 aa11.89□□□□□ -0.51
LSAMP-201ENST00000333617 PPP1R37O75864 691 aa11.88□□□□□ -0.51
LSAMP-201ENST00000333617 KTN1Q86UP2 1357 aaKnown RBP11.88□□□□□ -0.51
LSAMP-201ENST00000333617 NOS1P29475 1434 aa11.88□□□□□ -0.51
LSAMP-201ENST00000333617 ARHGAP31Q2M1Z3 1444 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms