RNA–Protein interactions for RNA: ENST00000332859.10

SUMO3-201, Transcript of small ubiquitin-like modifier 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUMO3, Length 1,807 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3-201ENST00000332859 FAM135BQ49AJ0 1406 aa27.35■■□□□ 1.97
SUMO3-201ENST00000332859 KNSTRNQ9Y448 316 aa27.34■■□□□ 1.97
SUMO3-201ENST00000332859 MINK1Q8N4C8 1332 aaPredicted RBP27.34■■□□□ 1.97
SUMO3-201ENST00000332859 PARD3Q8TEW0 1356 aa27.33■■□□□ 1.97
SUMO3-201ENST00000332859 TBX22Q9Y458 520 aa27.32■■□□□ 1.96
SUMO3-201ENST00000332859 MRS2Q9HD23 443 aa27.32■■□□□ 1.96
SUMO3-201ENST00000332859 MYBBP1AQ9BQG0 1328 aaKnown RBP27.31■■□□□ 1.96
SUMO3-201ENST00000332859 PLEKHH1Q9ULM0 1364 aa27.31■■□□□ 1.96
SUMO3-201ENST00000332859 WAPLQ7Z5K2 1190 aa27.3■■□□□ 1.96
SUMO3-201ENST00000332859 SLC26A8Q96RN1 970 aa27.3■■□□□ 1.96
SUMO3-201ENST00000332859 CCDC184Q52MB2 194 aa27.29■■□□□ 1.96
SUMO3-201ENST00000332859 TMC1Q8TDI8 760 aa27.29■■□□□ 1.96
SUMO3-201ENST00000332859 ATAD2Q6PL18 1390 aa27.29■■□□□ 1.96
SUMO3-201ENST00000332859 NINLQ9Y2I6 1382 aa27.29■■□□□ 1.96
SUMO3-201ENST00000332859 SRPK2P78362 688 aaKnown RBP27.28■■□□□ 1.96
SUMO3-201ENST00000332859 ANKLE2Q86XL3 938 aa27.28■■□□□ 1.96
SUMO3-201ENST00000332859 CABP2Q9NPB3 220 aa27.28■■□□□ 1.96
SUMO3-201ENST00000332859 NPC1L1Q9UHC9 1359 aa27.27■■□□□ 1.96
SUMO3-201ENST00000332859 CC2D1BQ5T0F9 858 aaKnown RBP27.27■■□□□ 1.96
SUMO3-201ENST00000332859 AMER1Q5JTC6 1135 aaPredicted RBP27.25■■□□□ 1.95
SUMO3-201ENST00000332859 SLC12A5Q9H2X9 1139 aa27.25■■□□□ 1.95
SUMO3-201ENST00000332859 PTPRUQ92729 1446 aa27.24■■□□□ 1.95
SUMO3-201ENST00000332859 SUPT16HQ9Y5B9 1047 aaKnown RBP27.24■■□□□ 1.95
SUMO3-201ENST00000332859 ROBO2Q9HCK4 1378 aa27.23■■□□□ 1.95
SUMO3-201ENST00000332859 CDK19Q9BWU1 502 aa27.23■■□□□ 1.95
SUMO3-201ENST00000332859 BRD4O60885 1362 aaPredicted RBP27.23■■□□□ 1.95
SUMO3-201ENST00000332859 ANKRD36BQ8N2N9 1353 aa27.21■■□□□ 1.95
SUMO3-201ENST00000332859 PIK3R4Q99570 1358 aa27.21■■□□□ 1.95
SUMO3-201ENST00000332859 CARD14Q9BXL6 1004 aa27.21■■□□□ 1.95
SUMO3-201ENST00000332859 PTCH1Q13635 1447 aa27.2■■□□□ 1.94
SUMO3-201ENST00000332859 NLRP13Q86W25 1043 aa27.2■■□□□ 1.94
SUMO3-201ENST00000332859 NSD3Q9BZ95 1437 aa27.19■■□□□ 1.94
SUMO3-201ENST00000332859 HNRNPUQ00839 825 aaKnown RBP eCLIP27.18■■□□□ 1.94
SUMO3-201ENST00000332859 AMOTL2Q9Y2J4 779 aa27.18■■□□□ 1.94
SUMO3-201ENST00000332859 USP32Q8NFA0 1604 aa27.18■■□□□ 1.94
SUMO3-201ENST00000332859 XRN1Q8IZH2 1706 aaKnown RBP27.18■■□□□ 1.94
SUMO3-201ENST00000332859 ADGRB2O60241 1585 aa27.18■■□□□ 1.94
SUMO3-201ENST00000332859 WASLO00401 505 aaPredicted RBP27.17■■□□□ 1.94
SUMO3-201ENST00000332859 NPHP4O75161 1426 aaPredicted RBP27.14■■□□□ 1.93
SUMO3-201ENST00000332859 FAM9BQ8IZU0 186 aa27.13■■□□□ 1.93
SUMO3-201ENST00000332859 PELP1Q8IZL8 1130 aaKnown RBP27.13■■□□□ 1.93
SUMO3-201ENST00000332859 TERF2IPQ9NYB0 399 aa27.13■■□□□ 1.93
SUMO3-201ENST00000332859 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.13■■□□□ 1.93
SUMO3-201ENST00000332859 A0A1W2PP64 1363 aa27.11■■□□□ 1.93
SUMO3-201ENST00000332859 CGNL1Q0VF96 1302 aa27.09■■□□□ 1.93
SUMO3-201ENST00000332859 ATP7BP35670 1465 aa27.09■■□□□ 1.93
SUMO3-201ENST00000332859 CD163L1Q9NR16 1453 aa27.08■■□□□ 1.93
SUMO3-201ENST00000332859 HDGFL2Q7Z4V5 671 aaPredicted RBP27.08■■□□□ 1.93
SUMO3-201ENST00000332859 PNISRQ8TF01 805 aaKnown RBP27.08■■□□□ 1.93
SUMO3-201ENST00000332859 NSD2O96028 1365 aa27.07■■□□□ 1.92
SUMO3-201ENST00000332859 PPP2R1AP30153 589 aa27.07■■□□□ 1.92
SUMO3-201ENST00000332859 CABP1Q9NZU7 370 aa27.07■■□□□ 1.92
SUMO3-201ENST00000332859 CHD2O14647 1828 aaKnown RBP27.07■■□□□ 1.92
SUMO3-201ENST00000332859 NEFLP07196 543 aa27.05■■□□□ 1.92
SUMO3-201ENST00000332859 KDM4FA0A1W2PPD8 638 aa27.04■■□□□ 1.92
SUMO3-201ENST00000332859 KCNA6P17658 529 aa27.04■■□□□ 1.92
SUMO3-201ENST00000332859 NUDT16Q96DE0 195 aaKnown RBP27.04■■□□□ 1.92
SUMO3-201ENST00000332859 PPIP5K1Q6PFW1 1433 aa27.04■■□□□ 1.92
SUMO3-201ENST00000332859 NCKAP5LQ9HCH0 1330 aa27.04■■□□□ 1.92
SUMO3-201ENST00000332859 ZBED9Q6R2W3 1325 aa27.03■■□□□ 1.92
SUMO3-201ENST00000332859 CCDC61Q9Y6R9 512 aa27.02■■□□□ 1.92
SUMO3-201ENST00000332859 MORC1Q86VD1 984 aa27■■□□□ 1.91
SUMO3-201ENST00000332859 CDC42BPGQ6DT37 1551 aa26.99■■□□□ 1.91
SUMO3-201ENST00000332859 PRR36Q9H6K5 1346 aa26.98■■□□□ 1.91
SUMO3-201ENST00000332859 TOPAZ1Q8N9V7 1692 aa26.98■■□□□ 1.91
SUMO3-201ENST00000332859 FKBP8Q14318 412 aa26.97■■□□□ 1.91
SUMO3-201ENST00000332859 CPSF1Q10570 1443 aaKnown RBP26.97■■□□□ 1.91
SUMO3-201ENST00000332859 NWD1Q149M9 1564 aa26.95■■□□□ 1.9
SUMO3-201ENST00000332859 ANKRD26Q9UPS8 1709 aa26.94■■□□□ 1.9
SUMO3-201ENST00000332859 ITSN1Q15811 1721 aa26.94■■□□□ 1.9
SUMO3-201ENST00000332859 EDC4Q6P2E9 1401 aaKnown RBP26.93■■□□□ 1.9
SUMO3-201ENST00000332859 KIF20BQ96Q89 1820 aa26.93■■□□□ 1.9
SUMO3-201ENST00000332859 AKAP12Q02952 1782 aa26.92■■□□□ 1.9
SUMO3-201ENST00000332859 MON2Q7Z3U7 1717 aa26.92■■□□□ 1.9
SUMO3-201ENST00000332859 INSRP06213 1382 aa26.92■■□□□ 1.9
SUMO3-201ENST00000332859 ANKARQ7Z5J8 1434 aa26.9■■□□□ 1.9
SUMO3-201ENST00000332859 ZNF692Q9BU19 519 aaPredicted RBP26.9■■□□□ 1.9
SUMO3-201ENST00000332859 PLEKHG3A1L390 1219 aa26.89■■□□□ 1.9
SUMO3-201ENST00000332859 FYB1O15117 783 aa26.89■■□□□ 1.9
SUMO3-201ENST00000332859 NALCNQ8IZF0 1738 aa26.89■■□□□ 1.89
SUMO3-201ENST00000332859 FMN2Q9NZ56 1722 aa26.88■■□□□ 1.89
SUMO3-201ENST00000332859 LMTK3Q96Q04 1460 aa26.88■■□□□ 1.89
SUMO3-201ENST00000332859 GGNBP2Q9H3C7 697 aa26.88■■□□□ 1.89
SUMO3-201ENST00000332859 POLR3AO14802 1390 aaPredicted RBP26.87■■□□□ 1.89
SUMO3-201ENST00000332859 NUTM2FA1L443 756 aa26.86■■□□□ 1.89
SUMO3-201ENST00000332859 TNNT2P45379 298 aaPredicted RBP26.86■■□□□ 1.89
SUMO3-201ENST00000332859 HSPA2P54652 639 aa26.86■■□□□ 1.89
SUMO3-201ENST00000332859 ADGRL3Q9HAR2 1447 aa26.85■■□□□ 1.89
SUMO3-201ENST00000332859 NKTRP30414 1462 aaKnown RBP26.85■■□□□ 1.89
SUMO3-201ENST00000332859 WDR43Q15061 677 aaKnown RBP eCLIP26.85■■□□□ 1.89
SUMO3-201ENST00000332859 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.84■■□□□ 1.89
SUMO3-201ENST00000332859 BLMP54132 1417 aaPredicted RBP26.84■■□□□ 1.89
SUMO3-201ENST00000332859 ACEP12821 1306 aa26.82■■□□□ 1.88
SUMO3-201ENST00000332859 NRKQ7Z2Y5 1582 aa26.81■■□□□ 1.88
SUMO3-201ENST00000332859 USP6P35125 1406 aa26.79■■□□□ 1.88
SUMO3-201ENST00000332859 RGPD8O14715 1765 aaPredicted RBP26.79■■□□□ 1.88
SUMO3-201ENST00000332859 CFAP53Q96M91 514 aa26.79■■□□□ 1.88
SUMO3-201ENST00000332859 SMG6Q86US8 1419 aaKnown RBP26.78■■□□□ 1.88
SUMO3-201ENST00000332859 MTHFSP49914 203 aa26.78■■□□□ 1.88
SUMO3-201ENST00000332859 ADAMTS8Q9UP79 889 aa26.78■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms