RNA–Protein interactions for RNA: ENST00000332772.4

SIMC1-201, Transcript of SUMO interacting motifs containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SIMC1, Length 1,891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1-201ENST00000332772 PTPRMP28827 1452 aa12.14□□□□□ -0.47
SIMC1-201ENST00000332772 DSG3P32926 999 aa12.14□□□□□ -0.47
SIMC1-201ENST00000332772 PDE3BQ13370 1112 aa12.14□□□□□ -0.47
SIMC1-201ENST00000332772 TMEM132EQ6IEE7 984 aa12.14□□□□□ -0.47
SIMC1-201ENST00000332772 RIMS2Q9UQ26 1411 aa12.14□□□□□ -0.47
SIMC1-201ENST00000332772 TULP4Q9NRJ4 1543 aa12.13□□□□□ -0.47
SIMC1-201ENST00000332772 NLRP1Q9C000 1473 aa12.13□□□□□ -0.47
SIMC1-201ENST00000332772 PPP2R1AP30153 589 aa12.12□□□□□ -0.47
SIMC1-201ENST00000332772 NSD2O96028 1365 aa12.12□□□□□ -0.47
SIMC1-201ENST00000332772 TNRQ92752 1358 aa12.12□□□□□ -0.47
SIMC1-201ENST00000332772 FKBP8Q14318 412 aa12.11□□□□□ -0.47
SIMC1-201ENST00000332772 SIRT1Q96EB6 747 aa12.11□□□□□ -0.47
SIMC1-201ENST00000332772 NUDCQ9Y266 331 aa12.11□□□□□ -0.47
SIMC1-201ENST00000332772 KNDC1Q76NI1 1749 aa12.11□□□□□ -0.47
SIMC1-201ENST00000332772 UBR1Q8IWV7 1749 aa12.11□□□□□ -0.47
SIMC1-201ENST00000332772 ATAD2Q6PL18 1390 aa12.11□□□□□ -0.47
SIMC1-201ENST00000332772 ANKRD36BQ8N2N9 1353 aa12.11□□□□□ -0.47
SIMC1-201ENST00000332772 ABCC11Q96J66 1382 aa12.11□□□□□ -0.47
SIMC1-201ENST00000332772 CARD14Q9BXL6 1004 aa12.1□□□□□ -0.47
SIMC1-201ENST00000332772 CNGB1Q14028 1251 aaPredicted RBP12.09□□□□□ -0.47
SIMC1-201ENST00000332772 MLECQ14165 292 aa12.09□□□□□ -0.47
SIMC1-201ENST00000332772 NRXN3Q9Y4C0 1643 aa12.09□□□□□ -0.47
SIMC1-201ENST00000332772 NGEFQ8N5V2 710 aa12.08□□□□□ -0.48
SIMC1-201ENST00000332772 RNF123Q5XPI4 1314 aa12.08□□□□□ -0.48
SIMC1-201ENST00000332772 NUTM2DQ5VT03 806 aaPredicted RBP12.08□□□□□ -0.48
SIMC1-201ENST00000332772 POLR3AO14802 1390 aaPredicted RBP12.07□□□□□ -0.48
SIMC1-201ENST00000332772 CGNL1Q0VF96 1302 aa12.07□□□□□ -0.48
SIMC1-201ENST00000332772 TECPR2O15040 1411 aa12.07□□□□□ -0.48
SIMC1-201ENST00000332772 U3KPZ7 1027 aaPredicted RBP12.07□□□□□ -0.48
SIMC1-201ENST00000332772 FAM135BQ49AJ0 1406 aa12.07□□□□□ -0.48
SIMC1-201ENST00000332772 NSD3Q9BZ95 1437 aa12.07□□□□□ -0.48
SIMC1-201ENST00000332772 TMEM2Q9UHN6 1383 aa12.06□□□□□ -0.48
SIMC1-201ENST00000332772 MED14O60244 1454 aa12.06□□□□□ -0.48
SIMC1-201ENST00000332772 FER1L4A9Z1Z3 1794 aa12.06□□□□□ -0.48
SIMC1-201ENST00000332772 C3P01024 1663 aa12.05□□□□□ -0.48
SIMC1-201ENST00000332772 WDR43Q15061 677 aaKnown RBP eCLIP12.05□□□□□ -0.48
SIMC1-201ENST00000332772 SLC12A5Q9H2X9 1139 aa12.05□□□□□ -0.48
SIMC1-201ENST00000332772 POGKQ9P215 609 aa12.05□□□□□ -0.48
SIMC1-201ENST00000332772 PRAM1Q96QH2 718 aa12.04□□□□□ -0.48
SIMC1-201ENST00000332772 ANKRD26Q9UPS8 1709 aa12.04□□□□□ -0.48
SIMC1-201ENST00000332772 CPS1P31327 1500 aa12.04□□□□□ -0.48
SIMC1-201ENST00000332772 TERF2IPQ9NYB0 399 aa12.04□□□□□ -0.48
SIMC1-201ENST00000332772 SLIT1O75093 1534 aa12.04□□□□□ -0.48
SIMC1-201ENST00000332772 PLEKHG1Q9ULL1 1385 aa12.03□□□□□ -0.48
SIMC1-201ENST00000332772 ARHGAP23Q9P227 1491 aa12.03□□□□□ -0.48
SIMC1-201ENST00000332772 NPM3O75607 178 aaKnown RBP12.02□□□□□ -0.48
SIMC1-201ENST00000332772 SPINK5Q9NQ38 1064 aaPredicted RBP12.02□□□□□ -0.48
SIMC1-201ENST00000332772 STK26Q9P289 416 aa12.02□□□□□ -0.48
SIMC1-201ENST00000332772 ADAMTS8Q9UP79 889 aa12.02□□□□□ -0.48
SIMC1-201ENST00000332772 ATP7BP35670 1465 aa12.02□□□□□ -0.49
SIMC1-201ENST00000332772 MORC1Q86VD1 984 aa12.02□□□□□ -0.49
SIMC1-201ENST00000332772 SRPK2P78362 688 aaKnown RBP12.01□□□□□ -0.49
SIMC1-201ENST00000332772 CABP2Q9NPB3 220 aa12□□□□□ -0.49
SIMC1-201ENST00000332772 PPP4R2Q9NY27 417 aa12□□□□□ -0.49
SIMC1-201ENST00000332772 DIP2AQ14689 1571 aa12□□□□□ -0.49
SIMC1-201ENST00000332772 A0A1W2PP64 1363 aa11.99□□□□□ -0.49
SIMC1-201ENST00000332772 CD163L1Q9NR16 1453 aa11.99□□□□□ -0.49
SIMC1-201ENST00000332772 ADGRB2O60241 1585 aa11.99□□□□□ -0.49
SIMC1-201ENST00000332772 HDGFL2Q7Z4V5 671 aaPredicted RBP11.99□□□□□ -0.49
SIMC1-201ENST00000332772 CDK19Q9BWU1 502 aa11.99□□□□□ -0.49
SIMC1-201ENST00000332772 ADAMTS13Q76LX8 1427 aa11.99□□□□□ -0.49
SIMC1-201ENST00000332772 SHPRHQ149N8 1683 aa11.98□□□□□ -0.49
SIMC1-201ENST00000332772 MINK1Q8N4C8 1332 aaPredicted RBP11.98□□□□□ -0.49
SIMC1-201ENST00000332772 METP08581 1390 aa11.98□□□□□ -0.49
SIMC1-201ENST00000332772 KIF20BQ96Q89 1820 aa11.98□□□□□ -0.49
SIMC1-201ENST00000332772 CFAP53Q96M91 514 aa11.97□□□□□ -0.49
SIMC1-201ENST00000332772 EID1Q9Y6B2 187 aa11.97□□□□□ -0.49
SIMC1-201ENST00000332772 ZNF521Q96K83 1311 aa11.97□□□□□ -0.49
SIMC1-201ENST00000332772 TRHP20396 242 aaPredicted RBP11.96□□□□□ -0.49
SIMC1-201ENST00000332772 THEMISQ8N1K5 641 aaPredicted RBP11.96□□□□□ -0.49
SIMC1-201ENST00000332772 WASLO00401 505 aaPredicted RBP11.95□□□□□ -0.5
SIMC1-201ENST00000332772 SAFB2Q14151 953 aaKnown RBP eCLIP11.95□□□□□ -0.5
SIMC1-201ENST00000332772 CDC42BPGQ6DT37 1551 aa11.95□□□□□ -0.5
SIMC1-201ENST00000332772 TBX22Q9Y458 520 aa11.95□□□□□ -0.5
SIMC1-201ENST00000332772 CPSF1Q10570 1443 aaKnown RBP11.94□□□□□ -0.5
SIMC1-201ENST00000332772 RCAN3Q9UKA8 241 aa11.94□□□□□ -0.5
SIMC1-201ENST00000332772 PIK3R4Q99570 1358 aa11.94□□□□□ -0.5
SIMC1-201ENST00000332772 PLEKHH1Q9ULM0 1364 aa11.94□□□□□ -0.5
SIMC1-201ENST00000332772 EDC4Q6P2E9 1401 aaKnown RBP11.93□□□□□ -0.5
SIMC1-201ENST00000332772 AKAP12Q02952 1782 aa11.93□□□□□ -0.5
SIMC1-201ENST00000332772 GOLGA2Q08379 1002 aa11.93□□□□□ -0.5
SIMC1-201ENST00000332772 WAPLQ7Z5K2 1190 aa11.93□□□□□ -0.5
SIMC1-201ENST00000332772 TXNDC2Q86VQ3 553 aa11.93□□□□□ -0.5
SIMC1-201ENST00000332772 MON2Q7Z3U7 1717 aa11.93□□□□□ -0.5
SIMC1-201ENST00000332772 ZNF142P52746 1687 aaPredicted RBP11.93□□□□□ -0.5
SIMC1-201ENST00000332772 PTCH1Q13635 1447 aa11.93□□□□□ -0.5
SIMC1-201ENST00000332772 FYB1O15117 783 aa11.92□□□□□ -0.5
SIMC1-201ENST00000332772 LTKP29376 864 aa11.92□□□□□ -0.5
SIMC1-201ENST00000332772 MTHFSP49914 203 aa11.92□□□□□ -0.5
SIMC1-201ENST00000332772 TRMT2AQ8IZ69 625 aaKnown RBP11.92□□□□□ -0.5
SIMC1-201ENST00000332772 BCANQ96GW7 911 aa11.92□□□□□ -0.5
SIMC1-201ENST00000332772 ZNF692Q9BU19 519 aaPredicted RBP11.92□□□□□ -0.5
SIMC1-201ENST00000332772 SETD1BQ9UPS6 1966 aaKnown RBP11.92□□□□□ -0.5
SIMC1-201ENST00000332772 ADAMTSL3P82987 1691 aa11.92□□□□□ -0.5
SIMC1-201ENST00000332772 RUNDC1Q96C34 613 aa11.91□□□□□ -0.5
SIMC1-201ENST00000332772 CABP1Q9NZU7 370 aa11.91□□□□□ -0.5
SIMC1-201ENST00000332772 CCDC61Q9Y6R9 512 aa11.91□□□□□ -0.5
SIMC1-201ENST00000332772 CEP170BQ9Y4F5 1589 aaPredicted RBP11.91□□□□□ -0.5
SIMC1-201ENST00000332772 ITSN1Q15811 1721 aa11.91□□□□□ -0.5
SIMC1-201ENST00000332772 RRP1P56182 461 aaKnown RBP11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms