RNA–Protein interactions for RNA: ENST00000330943.8

SNX20-202, Transcript of sorting nexin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX20, Length 2,904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-202ENST00000330943 PANK2Q9BZ23 570 aa18.36■□□□□ 0.53
SNX20-202ENST00000330943 RUNDC1Q96C34 613 aa18.35■□□□□ 0.53
SNX20-202ENST00000330943 FSD2A1L4K1 749 aa18.33■□□□□ 0.53
SNX20-202ENST00000330943 CHGAP10645 457 aaKnown RBP18.33■□□□□ 0.53
SNX20-202ENST00000330943 MORC1Q86VD1 984 aa18.33■□□□□ 0.52
SNX20-202ENST00000330943 PTPRTO14522 1441 aa18.33■□□□□ 0.52
SNX20-202ENST00000330943 MFAP1P55081 439 aaKnown RBP18.33■□□□□ 0.52
SNX20-202ENST00000330943 SHPRHQ149N8 1683 aa18.32■□□□□ 0.52
SNX20-202ENST00000330943 SLC24A1O60721 1099 aa18.31■□□□□ 0.52
SNX20-202ENST00000330943 C22orf23Q9BZE7 217 aa18.31■□□□□ 0.52
SNX20-202ENST00000330943 CHMP5Q9NZZ3 219 aa18.31■□□□□ 0.52
SNX20-202ENST00000330943 ZCCHC11Q5TAX3 1644 aaKnown RBP18.31■□□□□ 0.52
SNX20-202ENST00000330943 KIAA1210Q9ULL0 1709 aa18.31■□□□□ 0.52
SNX20-202ENST00000330943 NAP1L5Q96NT1 182 aaPredicted RBP18.31■□□□□ 0.52
SNX20-202ENST00000330943 IQSEC2Q5JU85 1478 aa18.3■□□□□ 0.52
SNX20-202ENST00000330943 PLCH2O75038 1416 aa18.3■□□□□ 0.52
SNX20-202ENST00000330943 NSD3Q9BZ95 1437 aa18.3■□□□□ 0.52
SNX20-202ENST00000330943 TRAK2O60296 914 aa18.3■□□□□ 0.52
SNX20-202ENST00000330943 NUTM2DQ5VT03 806 aaPredicted RBP18.3■□□□□ 0.52
SNX20-202ENST00000330943 WDR63Q8IWG1 891 aa18.3■□□□□ 0.52
SNX20-202ENST00000330943 PNNQ9H307 717 aaKnown RBP18.3■□□□□ 0.52
SNX20-202ENST00000330943 SHROOM2Q13796 1616 aa18.29■□□□□ 0.52
SNX20-202ENST00000330943 ADGRF5Q8IZF2 1346 aa18.29■□□□□ 0.52
SNX20-202ENST00000330943 MVPQ14764 893 aaKnown RBP18.29■□□□□ 0.52
SNX20-202ENST00000330943 PHF23Q9BUL5 403 aaPredicted RBP18.29■□□□□ 0.52
SNX20-202ENST00000330943 ABCA6Q8N139 1617 aa18.28■□□□□ 0.52
SNX20-202ENST00000330943 GGT6Q6P531 493 aa18.28■□□□□ 0.52
SNX20-202ENST00000330943 FTSJ3Q8IY81 847 aaKnown RBP18.28■□□□□ 0.52
SNX20-202ENST00000330943 ABCC1P33527 1531 aa18.28■□□□□ 0.52
SNX20-202ENST00000330943 RTEL1-TNFRSF6BF6WH68 1400 aa18.28■□□□□ 0.52
SNX20-202ENST00000330943 MAP3K4Q9Y6R4 1608 aa18.26■□□□□ 0.51
SNX20-202ENST00000330943 CLCN1P35523 988 aa18.26■□□□□ 0.51
SNX20-202ENST00000330943 ZKSCAN2Q63HK3 967 aa18.26■□□□□ 0.51
SNX20-202ENST00000330943 MYH16Q9H6N6 1097 aa18.26■□□□□ 0.51
SNX20-202ENST00000330943 TET3O43151 1660 aa18.25■□□□□ 0.51
SNX20-202ENST00000330943 UGGT1Q9NYU2 1555 aa18.25■□□□□ 0.51
SNX20-202ENST00000330943 HSCBQ8IWL3 235 aa18.25■□□□□ 0.51
SNX20-202ENST00000330943 DZIP1LQ8IYY4 767 aaKnown RBP18.25■□□□□ 0.51
SNX20-202ENST00000330943 MTHFSP49914 203 aa18.24■□□□□ 0.51
SNX20-202ENST00000330943 MRE11P49959 708 aa18.24■□□□□ 0.51
SNX20-202ENST00000330943 SLC12A5Q9H2X9 1139 aa18.24■□□□□ 0.51
SNX20-202ENST00000330943 NPM1P06748 294 aaKnown RBP eCLIP18.23■□□□□ 0.51
SNX20-202ENST00000330943 KANK1Q14678 1352 aa18.23■□□□□ 0.51
SNX20-202ENST00000330943 RAPGEF3O95398 923 aa18.22■□□□□ 0.51
SNX20-202ENST00000330943 CCDC27Q2M243 656 aa18.22■□□□□ 0.51
SNX20-202ENST00000330943 OSCARQ8IYS5 282 aa18.22■□□□□ 0.51
SNX20-202ENST00000330943 CFAP65Q6ZU64 1925 aaKnown RBP18.22■□□□□ 0.51
SNX20-202ENST00000330943 MYOM2P54296 1465 aa18.22■□□□□ 0.51
SNX20-202ENST00000330943 CFAP53Q96M91 514 aa18.22■□□□□ 0.51
SNX20-202ENST00000330943 DDX11L8A8MPP1 907 aa18.22■□□□□ 0.51
SNX20-202ENST00000330943 TSR2Q969E8 191 aaKnown RBP18.21■□□□□ 0.51
SNX20-202ENST00000330943 GRPEL1Q9HAV7 217 aa18.21■□□□□ 0.51
SNX20-202ENST00000330943 ZFYVE16Q7Z3T8 1539 aa18.21■□□□□ 0.51
SNX20-202ENST00000330943 DEPDC5O75140 1603 aa18.21■□□□□ 0.51
SNX20-202ENST00000330943 SMC4Q9NTJ3 1288 aa18.21■□□□□ 0.51
SNX20-202ENST00000330943 FANCAO15360 1455 aa18.2■□□□□ 0.5
SNX20-202ENST00000330943 ZNF518AQ6AHZ1 1483 aa18.2■□□□□ 0.5
SNX20-202ENST00000330943 SBNO2Q9Y2G9 1366 aa18.2■□□□□ 0.5
SNX20-202ENST00000330943 U2AF1L5P0DN76 240 aaPredicted RBP18.2■□□□□ 0.5
SNX20-202ENST00000330943 U2AF1Q01081 240 aaKnown RBP eCLIP18.2■□□□□ 0.5
SNX20-202ENST00000330943 ITPRIPQ8IWB1 547 aa18.2■□□□□ 0.5
SNX20-202ENST00000330943 TRAK1Q9UPV9 953 aa18.2■□□□□ 0.5
SNX20-202ENST00000330943 ZNF692Q9BU19 519 aaPredicted RBP18.19■□□□□ 0.5
SNX20-202ENST00000330943 MYO3AQ8NEV4 1616 aa18.19■□□□□ 0.5
SNX20-202ENST00000330943 ASXL2Q76L83 1435 aa18.18■□□□□ 0.5
SNX20-202ENST00000330943 TRIM27P14373 513 aa18.18■□□□□ 0.5
SNX20-202ENST00000330943 CYB5RLQ6IPT4 315 aa18.18■□□□□ 0.5
SNX20-202ENST00000330943 HDAC1Q13547 482 aaPredicted RBP18.17■□□□□ 0.5
SNX20-202ENST00000330943 HSP90AA1P07900 732 aaKnown RBP18.16■□□□□ 0.5
SNX20-202ENST00000330943 EXOSC9Q06265 439 aaKnown RBP18.16■□□□□ 0.5
SNX20-202ENST00000330943 GLIPR1L2Q4G1C9 344 aa18.16■□□□□ 0.5
SNX20-202ENST00000330943 DDX19BQ9UMR2 479 aa18.16■□□□□ 0.5
SNX20-202ENST00000330943 KIF1BO60333 1816 aa18.16■□□□□ 0.5
SNX20-202ENST00000330943 NEURL4Q96JN8 1562 aa18.16■□□□□ 0.5
SNX20-202ENST00000330943 ESPNB1AK53 854 aa18.15■□□□□ 0.5
SNX20-202ENST00000330943 ADGRL1O94910 1474 aa18.15■□□□□ 0.5
SNX20-202ENST00000330943 NCOA3Q9Y6Q9 1424 aa18.14■□□□□ 0.5
SNX20-202ENST00000330943 SSH1Q8WYL5 1049 aa18.14■□□□□ 0.49
SNX20-202ENST00000330943 SMC5Q8IY18 1101 aa18.14■□□□□ 0.49
SNX20-202ENST00000330943 TNPO1Q92973 898 aaKnown RBP18.14■□□□□ 0.49
SNX20-202ENST00000330943 VWDEQ8N2E2 1590 aa18.14■□□□□ 0.49
SNX20-202ENST00000330943 ERBB4Q15303 1308 aa18.14■□□□□ 0.49
SNX20-202ENST00000330943 MROH2AA6NES4 1674 aa18.14■□□□□ 0.49
SNX20-202ENST00000330943 IFT172Q9UG01 1749 aa18.14■□□□□ 0.49
SNX20-202ENST00000330943 HSP90AA2PQ14568 343 aaPredicted RBP18.13■□□□□ 0.49
SNX20-202ENST00000330943 ATF7IPQ6VMQ6 1270 aa18.13■□□□□ 0.49
SNX20-202ENST00000330943 NOS1P29475 1434 aa18.13■□□□□ 0.49
SNX20-202ENST00000330943 HSP90AB1P08238 724 aaKnown RBP18.13■□□□□ 0.49
SNX20-202ENST00000330943 CT47B1P0C2W7 299 aaPredicted RBP18.13■□□□□ 0.49
SNX20-202ENST00000330943 DDIT3P35638 169 aa18.13■□□□□ 0.49
SNX20-202ENST00000330943 ISY1Q9ULR0 285 aaKnown RBP18.13■□□□□ 0.49
SNX20-202ENST00000330943 TRIM44Q96DX7 344 aaPredicted RBP18.12■□□□□ 0.49
SNX20-202ENST00000330943 QRICH2Q9H0J4 1663 aa18.12■□□□□ 0.49
SNX20-202ENST00000330943 NOB1Q9ULX3 412 aaKnown RBP18.12■□□□□ 0.49
SNX20-202ENST00000330943 RBM25P49756 843 aaKnown RBP18.12■□□□□ 0.49
SNX20-202ENST00000330943 TMEM57Q8N5G2 664 aa18.12■□□□□ 0.49
SNX20-202ENST00000330943 SAFB2Q14151 953 aaKnown RBP eCLIP18.11■□□□□ 0.49
SNX20-202ENST00000330943 TMEM132EQ6IEE7 984 aa18.11■□□□□ 0.49
SNX20-202ENST00000330943 LNPKQ9C0E8 428 aa18.11■□□□□ 0.49
SNX20-202ENST00000330943 ADGRB2O60241 1585 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms