RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 SPINK5Q9NQ38 1064 aaPredicted RBP20.03■□□□□ 0.8
BRCC3-201ENST00000330045 ARHGAP31Q2M1Z3 1444 aa20.02■□□□□ 0.8
BRCC3-201ENST00000330045 NKTRP30414 1462 aaKnown RBP20.02■□□□□ 0.8
BRCC3-201ENST00000330045 E9PSI1 815 aa20.01■□□□□ 0.79
BRCC3-201ENST00000330045 ZC3H13Q5T200 1668 aaKnown RBP20.01■□□□□ 0.79
BRCC3-201ENST00000330045 NGEFQ8N5V2 710 aa20.01■□□□□ 0.79
BRCC3-201ENST00000330045 DDRGK1Q96HY6 314 aa20.01■□□□□ 0.79
BRCC3-201ENST00000330045 PIK3C2BO00750 1634 aa20.01■□□□□ 0.79
BRCC3-201ENST00000330045 ARHGEF40Q8TER5 1519 aa19.99■□□□□ 0.79
BRCC3-201ENST00000330045 TMEM132EQ6IEE7 984 aa19.99■□□□□ 0.79
BRCC3-201ENST00000330045 PREX1Q8TCU6 1659 aa19.99■□□□□ 0.79
BRCC3-201ENST00000330045 PPLO60437 1756 aa19.99■□□□□ 0.79
BRCC3-201ENST00000330045 LAS1LQ9Y4W2 734 aaKnown RBP19.98■□□□□ 0.79
BRCC3-201ENST00000330045 CLTCQ00610 1675 aaKnown RBP19.98■□□□□ 0.79
BRCC3-201ENST00000330045 CENPJQ9HC77 1338 aaPredicted RBP19.98■□□□□ 0.79
BRCC3-201ENST00000330045 REREQ9P2R6 1566 aa19.98■□□□□ 0.79
BRCC3-201ENST00000330045 TRHP20396 242 aaPredicted RBP19.97■□□□□ 0.79
BRCC3-201ENST00000330045 AGLP35573 1532 aa19.97■□□□□ 0.79
BRCC3-201ENST00000330045 BCAR3O75815 825 aa19.97■□□□□ 0.79
BRCC3-201ENST00000330045 POLR3AO14802 1390 aaPredicted RBP19.96■□□□□ 0.79
BRCC3-201ENST00000330045 MYO5BQ9ULV0 1848 aa19.96■□□□□ 0.79
BRCC3-201ENST00000330045 PPM1GO15355 546 aaPredicted RBP19.95■□□□□ 0.78
BRCC3-201ENST00000330045 FAM161AQ3B820 660 aa19.95■□□□□ 0.78
BRCC3-201ENST00000330045 ADGRB1O14514 1584 aa19.95■□□□□ 0.78
BRCC3-201ENST00000330045 USP35Q9P2H5 1018 aa19.95■□□□□ 0.78
BRCC3-201ENST00000330045 NEFMP07197 916 aa19.94■□□□□ 0.78
BRCC3-201ENST00000330045 DMRT2Q9Y5R5 561 aa19.94■□□□□ 0.78
BRCC3-201ENST00000330045 QRICH2Q9H0J4 1663 aa19.94■□□□□ 0.78
BRCC3-201ENST00000330045 NEXMIFQ5QGS0 1516 aa19.93■□□□□ 0.78
BRCC3-201ENST00000330045 TRAK1Q9UPV9 953 aa19.93■□□□□ 0.78
BRCC3-201ENST00000330045 SHPRHQ149N8 1683 aa19.92■□□□□ 0.78
BRCC3-201ENST00000330045 C8orf34Q49A92 452 aa19.92■□□□□ 0.78
BRCC3-201ENST00000330045 NSD3Q9BZ95 1437 aa19.92■□□□□ 0.78
BRCC3-201ENST00000330045 MORC1Q86VD1 984 aa19.92■□□□□ 0.78
BRCC3-201ENST00000330045 WWC1Q8IX03 1113 aa19.92■□□□□ 0.78
BRCC3-201ENST00000330045 C14orf93Q9H972 538 aaKnown RBP19.92■□□□□ 0.78
BRCC3-201ENST00000330045 SLC52A1Q9NWF4 448 aa19.92■□□□□ 0.78
BRCC3-201ENST00000330045 USP32Q8NFA0 1604 aa19.91■□□□□ 0.78
BRCC3-201ENST00000330045 SLC12A5Q9H2X9 1139 aa19.9■□□□□ 0.78
BRCC3-201ENST00000330045 RGS3P49796 1198 aa19.9■□□□□ 0.78
BRCC3-201ENST00000330045 TMEM131LA2VDJ0 1609 aa19.89■□□□□ 0.77
BRCC3-201ENST00000330045 PDE3AQ14432 1141 aa19.89■□□□□ 0.77
BRCC3-201ENST00000330045 RPGRIP1LQ68CZ1 1315 aa19.88■□□□□ 0.77
BRCC3-201ENST00000330045 CGNL1Q0VF96 1302 aa19.88■□□□□ 0.77
BRCC3-201ENST00000330045 TNNT2P45379 298 aaPredicted RBP19.87■□□□□ 0.77
BRCC3-201ENST00000330045 RUNDC1Q96C34 613 aa19.86■□□□□ 0.77
BRCC3-201ENST00000330045 NINLQ9Y2I6 1382 aa19.86■□□□□ 0.77
BRCC3-201ENST00000330045 DAXXQ9UER7 740 aaPredicted RBP19.85■□□□□ 0.77
BRCC3-201ENST00000330045 VGFO15240 615 aaPredicted RBP19.85■□□□□ 0.77
BRCC3-201ENST00000330045 CANXP27824 592 aaKnown RBP19.85■□□□□ 0.77
BRCC3-201ENST00000330045 ZMYM3Q14202 1370 aa19.85■□□□□ 0.77
BRCC3-201ENST00000330045 IQSEC2Q5JU85 1478 aa19.85■□□□□ 0.77
BRCC3-201ENST00000330045 IGHDP01880 384 aa19.84■□□□□ 0.77
BRCC3-201ENST00000330045 STAG3Q9UJ98 1225 aa19.84■□□□□ 0.77
BRCC3-201ENST00000330045 NEUROD2Q15784 382 aa19.84■□□□□ 0.77
BRCC3-201ENST00000330045 PPP6R1Q9UPN7 881 aa19.84■□□□□ 0.77
BRCC3-201ENST00000330045 SLC4A3P48751 1232 aa19.83■□□□□ 0.76
BRCC3-201ENST00000330045 PLPPR3Q6T4P5 718 aa19.83■□□□□ 0.76
BRCC3-201ENST00000330045 TCP11L2Q8N4U5 519 aa19.82■□□□□ 0.76
BRCC3-201ENST00000330045 CLUAP1Q96AJ1 413 aa19.82■□□□□ 0.76
BRCC3-201ENST00000330045 ESF1Q9H501 851 aaKnown RBP19.82■□□□□ 0.76
BRCC3-201ENST00000330045 ARHGEF28Q8N1W1 1705 aaKnown RBP19.82■□□□□ 0.76
BRCC3-201ENST00000330045 STK26Q9P289 416 aa19.82■□□□□ 0.76
BRCC3-201ENST00000330045 RRP7AQ9Y3A4 280 aaKnown RBP19.82■□□□□ 0.76
BRCC3-201ENST00000330045 SPATA31D1Q6ZQQ2 1576 aa19.81■□□□□ 0.76
BRCC3-201ENST00000330045 CEBPAP49715 358 aaPredicted RBP19.81■□□□□ 0.76
BRCC3-201ENST00000330045 SAFB2Q14151 953 aaKnown RBP eCLIP19.81■□□□□ 0.765e-6■□□□□ 11
BRCC3-201ENST00000330045 PANK1Q8TE04 598 aa19.81■□□□□ 0.76
BRCC3-201ENST00000330045 COG6Q9Y2V7 657 aa19.81■□□□□ 0.76
BRCC3-201ENST00000330045 MTHFSP49914 203 aa19.81■□□□□ 0.76
BRCC3-201ENST00000330045 PUS7Q96PZ0 661 aaKnown RBP19.81■□□□□ 0.76
BRCC3-201ENST00000330045 PHF23Q9BUL5 403 aaPredicted RBP19.81■□□□□ 0.76
BRCC3-201ENST00000330045 WDR63Q8IWG1 891 aa19.8■□□□□ 0.76
BRCC3-201ENST00000330045 CFAP53Q96M91 514 aa19.8■□□□□ 0.76
BRCC3-201ENST00000330045 TULP4Q9NRJ4 1543 aa19.8■□□□□ 0.76
BRCC3-201ENST00000330045 RARSP54136 660 aaKnown RBP19.79■□□□□ 0.76
BRCC3-201ENST00000330045 FRAT1Q92837 279 aaPredicted RBP19.79■□□□□ 0.76
BRCC3-201ENST00000330045 A2ML1A8K2U0 1454 aa19.78■□□□□ 0.76
BRCC3-201ENST00000330045 EVC2Q86UK5 1308 aa19.78■□□□□ 0.76
BRCC3-201ENST00000330045 CCDC27Q2M243 656 aa19.77■□□□□ 0.75
BRCC3-201ENST00000330045 VIRMAQ69YN4 1812 aaKnown RBP19.77■□□□□ 0.75
BRCC3-201ENST00000330045 NSD2O96028 1365 aa19.76■□□□□ 0.75
BRCC3-201ENST00000330045 ANKRD36BQ8N2N9 1353 aa19.76■□□□□ 0.75
BRCC3-201ENST00000330045 MAPK8IP3Q9UPT6 1336 aa19.76■□□□□ 0.75
BRCC3-201ENST00000330045 NFKBIBQ15653 356 aa19.76■□□□□ 0.75
BRCC3-201ENST00000330045 ZFYVE9O95405 1425 aa19.75■□□□□ 0.75
BRCC3-201ENST00000330045 AAMPQ13685 434 aa19.75■□□□□ 0.75
BRCC3-201ENST00000330045 NCBP3Q53F19 620 aaKnown RBP19.73■□□□□ 0.75
BRCC3-201ENST00000330045 PMFBP1Q8TBY8 1022 aa19.73■□□□□ 0.75
BRCC3-201ENST00000330045 RIMS2Q9UQ26 1411 aa19.72■□□□□ 0.75
BRCC3-201ENST00000330045 ADGRB2O60241 1585 aa19.71■□□□□ 0.75
BRCC3-201ENST00000330045 U2AF1L5P0DN76 240 aaPredicted RBP19.71■□□□□ 0.75
BRCC3-201ENST00000330045 U2AF1Q01081 240 aaKnown RBP eCLIP19.71■□□□□ 0.75
BRCC3-201ENST00000330045 MYH16Q9H6N6 1097 aa19.71■□□□□ 0.75
BRCC3-201ENST00000330045 TNRQ92752 1358 aa19.7■□□□□ 0.74
BRCC3-201ENST00000330045 CABP2Q9NPB3 220 aa19.7■□□□□ 0.74
BRCC3-201ENST00000330045 RLBP1P12271 317 aa19.7■□□□□ 0.74
BRCC3-201ENST00000330045 BCL2L13Q9BXK5 485 aa19.7■□□□□ 0.74
BRCC3-201ENST00000330045 ALKQ9UM73 1620 aa19.7■□□□□ 0.74
BRCC3-201ENST00000330045 USP19O94966 1318 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms