RNA–Protein interactions for RNA: ENST00000329629.8

FNDC1-202, Transcript of fibronectin type III domain containing 1, humanhuman

TSL 1 (best)

Gene FNDC1, Length 6,034 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC1-202ENST00000329629 MAP7D2Q96T17 732 aa17.08■□□□□ 0.33
FNDC1-202ENST00000329629 CFTRP13569 1480 aa17.08■□□□□ 0.33
FNDC1-202ENST00000329629 NUCB2P80303 420 aa17.08■□□□□ 0.33
FNDC1-202ENST00000329629 PRKRIP1Q9H875 184 aaPredicted RBP17.08■□□□□ 0.33
FNDC1-202ENST00000329629 NASPP49321 788 aaPredicted RBP17.08■□□□□ 0.32
FNDC1-202ENST00000329629 CDR1P51861 262 aa17.08■□□□□ 0.32
FNDC1-202ENST00000329629 USP47Q96K76 1375 aa17.08■□□□□ 0.32
FNDC1-202ENST00000329629 RNF214Q8ND24 703 aa17.07■□□□□ 0.32
FNDC1-202ENST00000329629 AMOTL1Q8IY63 956 aa17.07■□□□□ 0.32
FNDC1-202ENST00000329629 FGD6Q6ZV73 1430 aa17.07■□□□□ 0.32
FNDC1-202ENST00000329629 LRRFIP1Q32MZ4 808 aaKnown RBP17.07■□□□□ 0.32
FNDC1-202ENST00000329629 DZIP1LQ8IYY4 767 aaKnown RBP17.07■□□□□ 0.32
FNDC1-202ENST00000329629 INTS3Q68E01 1043 aaKnown RBP17.07■□□□□ 0.32
FNDC1-202ENST00000329629 AFAP1Q8N556 730 aa17.07■□□□□ 0.32
FNDC1-202ENST00000329629 TTLL5Q6EMB2 1281 aa17.06■□□□□ 0.32
FNDC1-202ENST00000329629 CCDC73Q6ZRK6 1079 aa17.06■□□□□ 0.32
FNDC1-202ENST00000329629 C22orf23Q9BZE7 217 aa17.06■□□□□ 0.32
FNDC1-202ENST00000329629 RNF20Q5VTR2 975 aa17.06■□□□□ 0.32
FNDC1-202ENST00000329629 SKIDA1Q1XH10 827 aa17.06■□□□□ 0.32
FNDC1-202ENST00000329629 NOL10Q9BSC4 688 aaKnown RBP17.06■□□□□ 0.32
FNDC1-202ENST00000329629 TRIM34Q9BYJ4 488 aa17.05■□□□□ 0.32
FNDC1-202ENST00000329629 CAGE1Q8TC20 777 aa17.05■□□□□ 0.32
FNDC1-202ENST00000329629 TRDNQ13061 729 aa17.05■□□□□ 0.32
FNDC1-202ENST00000329629 H0YHG0 523 aa17.05■□□□□ 0.32
FNDC1-202ENST00000329629 NEXNQ0ZGT2 675 aa17.05■□□□□ 0.32
FNDC1-202ENST00000329629 SNAPC4Q5SXM2 1469 aa17.04■□□□□ 0.32
FNDC1-202ENST00000329629 LNPKQ9C0E8 428 aa17.04■□□□□ 0.32
FNDC1-202ENST00000329629 MRE11P49959 708 aa17.04■□□□□ 0.32
FNDC1-202ENST00000329629 DIAPH1O60610 1272 aaKnown RBP17.04■□□□□ 0.32
FNDC1-202ENST00000329629 CASKIN1Q8WXD9 1431 aa17.04■□□□□ 0.32
FNDC1-202ENST00000329629 FYCO1Q9BQS8 1478 aa17.04■□□□□ 0.32
FNDC1-202ENST00000329629 RBM10P98175 930 aaKnown RBP17.04■□□□□ 0.32
FNDC1-202ENST00000329629 CTDP1Q9Y5B0 961 aaPredicted RBP17.04■□□□□ 0.32
FNDC1-202ENST00000329629 KDM4AO75164 1064 aa17.03■□□□□ 0.32
FNDC1-202ENST00000329629 CT47A1Q5JQC4 288 aaPredicted RBP17.03■□□□□ 0.32
FNDC1-202ENST00000329629 ANKRD50Q9ULJ7 1429 aa17.03■□□□□ 0.32
FNDC1-202ENST00000329629 PHF23Q9BUL5 403 aaPredicted RBP17.03■□□□□ 0.32
FNDC1-202ENST00000329629 CWC15Q9P013 229 aaKnown RBP17.02■□□□□ 0.32
FNDC1-202ENST00000329629 ERICH2A1L162 156 aa17.02■□□□□ 0.32
FNDC1-202ENST00000329629 TXNDC2Q86VQ3 553 aa17.02■□□□□ 0.32
FNDC1-202ENST00000329629 OLFM4Q6UX06 510 aa17.02■□□□□ 0.31
FNDC1-202ENST00000329629 STAC3Q96MF2 364 aa17.02■□□□□ 0.31
FNDC1-202ENST00000329629 TOPBP1Q92547 1522 aa17.01■□□□□ 0.31
FNDC1-202ENST00000329629 NCOA2Q15596 1464 aa17.01■□□□□ 0.31
FNDC1-202ENST00000329629 RIPK4P57078 832 aa17.01■□□□□ 0.31
FNDC1-202ENST00000329629 CCDC27Q2M243 656 aa17.01■□□□□ 0.31
FNDC1-202ENST00000329629 G3BP1Q13283 466 aaKnown RBP eCLIP17.01■□□□□ 0.31
FNDC1-202ENST00000329629 BRPF3Q9ULD4 1205 aa17.01■□□□□ 0.31
FNDC1-202ENST00000329629 PROSER2Q86WR7 435 aaPredicted RBP17■□□□□ 0.31
FNDC1-202ENST00000329629 HSP90AB2PQ58FF8 381 aa17■□□□□ 0.31
FNDC1-202ENST00000329629 CAVIN1Q6NZI2 390 aaKnown RBP17■□□□□ 0.31
FNDC1-202ENST00000329629 RAPGEF4Q8WZA2 1011 aa17■□□□□ 0.31
FNDC1-202ENST00000329629 HMGXB3Q12766 1538 aa17■□□□□ 0.31
FNDC1-202ENST00000329629 RDXP35241 583 aaKnown RBP17■□□□□ 0.31
FNDC1-202ENST00000329629 API5Q9BZZ5 524 aaKnown RBP17■□□□□ 0.31
FNDC1-202ENST00000329629 NAT10Q9H0A0 1025 aaKnown RBP17■□□□□ 0.31
FNDC1-202ENST00000329629 CCDC191Q8NCU4 936 aa16.99■□□□□ 0.31
FNDC1-202ENST00000329629 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.99■□□□□ 0.312e-6■■■■■ 149.1
FNDC1-202ENST00000329629 LRRC9Q6ZRR7 1453 aa16.99■□□□□ 0.31
FNDC1-202ENST00000329629 ODF2Q5BJF6 829 aa16.99■□□□□ 0.31
FNDC1-202ENST00000329629 MIA2Q96PC5 1412 aa16.99■□□□□ 0.31
FNDC1-202ENST00000329629 FKBP5Q13451 457 aaPredicted RBP16.99■□□□□ 0.31
FNDC1-202ENST00000329629 SAFBQ15424 915 aaKnown RBP eCLIP16.99■□□□□ 0.31
FNDC1-202ENST00000329629 NUTM2GQ5VZR2 741 aa16.99■□□□□ 0.31
FNDC1-202ENST00000329629 VPS37DQ86XT2 251 aa16.99■□□□□ 0.31
FNDC1-202ENST00000329629 ROCK1Q13464 1354 aa16.98■□□□□ 0.31
FNDC1-202ENST00000329629 TRAK2O60296 914 aa16.98■□□□□ 0.31
FNDC1-202ENST00000329629 CCDC43Q96MW1 224 aaKnown RBP16.98■□□□□ 0.31
FNDC1-202ENST00000329629 PLCD4Q9BRC7 762 aa16.98■□□□□ 0.31
FNDC1-202ENST00000329629 SMC2O95347 1197 aa16.98■□□□□ 0.31
FNDC1-202ENST00000329629 TRIM5Q9C035 493 aa16.98■□□□□ 0.31
FNDC1-202ENST00000329629 KIF21BO75037 1637 aa16.97■□□□□ 0.31
FNDC1-202ENST00000329629 EPS15P42566 896 aa16.97■□□□□ 0.31
FNDC1-202ENST00000329629 MTERF4Q7Z6M4 381 aaKnown RBP16.97■□□□□ 0.31
FNDC1-202ENST00000329629 DCTN1Q14203 1278 aa16.97■□□□□ 0.31
FNDC1-202ENST00000329629 TMEM132EQ6IEE7 984 aa16.97■□□□□ 0.31
FNDC1-202ENST00000329629 NLRP2Q9NX02 1062 aa16.97■□□□□ 0.31
FNDC1-202ENST00000329629 CCDC66A2RUB6 948 aa16.97■□□□□ 0.31
FNDC1-202ENST00000329629 ZFYVE27Q5T4F4 411 aa16.97■□□□□ 0.31
FNDC1-202ENST00000329629 PANK1Q8TE04 598 aa16.97■□□□□ 0.31
FNDC1-202ENST00000329629 GPRASP1Q5JY77 1395 aa16.97■□□□□ 0.31
FNDC1-202ENST00000329629 SAMD1Q6SPF0 538 aaPredicted RBP16.97■□□□□ 0.31
FNDC1-202ENST00000329629 ERCC4Q92889 916 aaPredicted RBP16.97■□□□□ 0.31
FNDC1-202ENST00000329629 THEMISQ8N1K5 641 aaPredicted RBP16.96■□□□□ 0.31
FNDC1-202ENST00000329629 CABP2Q9NPB3 220 aa16.96■□□□□ 0.31
FNDC1-202ENST00000329629 PKNOX2Q96KN3 472 aa16.96■□□□□ 0.31
FNDC1-202ENST00000329629 ESCO1Q5FWF5 840 aa16.96■□□□□ 0.31
FNDC1-202ENST00000329629 TSPY26PQ9H489 355 aa16.96■□□□□ 0.31
FNDC1-202ENST00000329629 SDF4Q9BRK5 362 aa16.95■□□□□ 0.3
FNDC1-202ENST00000329629 CDC45O75419 566 aa16.95■□□□□ 0.3
FNDC1-202ENST00000329629 FYB1O15117 783 aa16.95■□□□□ 0.3
FNDC1-202ENST00000329629 CNKSR2Q8WXI2 1034 aa16.95■□□□□ 0.3
FNDC1-202ENST00000329629 OFD1O75665 1012 aa16.95■□□□□ 0.3
FNDC1-202ENST00000329629 KLHL34Q8N239 644 aa16.95■□□□□ 0.3
FNDC1-202ENST00000329629 ERC2O15083 957 aa16.94■□□□□ 0.3
FNDC1-202ENST00000329629 CCDC173Q0VFZ6 552 aa16.94■□□□□ 0.3
FNDC1-202ENST00000329629 SPC24Q8NBT2 197 aa16.94■□□□□ 0.3
FNDC1-202ENST00000329629 IL27Q8NEV9 243 aa16.94■□□□□ 0.3
FNDC1-202ENST00000329629 POLA1P09884 1462 aaPredicted RBP16.94■□□□□ 0.3
FNDC1-202ENST00000329629 PLEKHH2Q8IVE3 1493 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms