RNA–Protein interactions for RNA: ENST00000329553.2

RIPPLY3-201, Transcript of ripply transcriptional repressor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPPLY3, Length 2,235 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-201ENST00000329553 NPC1L1Q9UHC9 1359 aa27.4■■□□□ 1.98
RIPPLY3-201ENST00000329553 TXNDC2Q86VQ3 553 aa27.4■■□□□ 1.98
RIPPLY3-201ENST00000329553 DLC1Q96QB1 1528 aa27.39■■□□□ 1.98
RIPPLY3-201ENST00000329553 WAPLQ7Z5K2 1190 aa27.39■■□□□ 1.97
RIPPLY3-201ENST00000329553 RIMS1Q86UR5 1692 aaKnown RBP27.38■■□□□ 1.97
RIPPLY3-201ENST00000329553 SRPK2P78362 688 aaKnown RBP27.36■■□□□ 1.97
RIPPLY3-201ENST00000329553 PLEKHG1Q9ULL1 1385 aa27.35■■□□□ 1.97
RIPPLY3-201ENST00000329553 THEMISQ8N1K5 641 aaPredicted RBP27.35■■□□□ 1.97
RIPPLY3-201ENST00000329553 EID1Q9Y6B2 187 aa27.35■■□□□ 1.97
RIPPLY3-201ENST00000329553 PLEKHH1Q9ULM0 1364 aa27.35■■□□□ 1.97
RIPPLY3-201ENST00000329553 ADAMTS13Q76LX8 1427 aa27.35■■□□□ 1.97
RIPPLY3-201ENST00000329553 ARHGAP23Q9P227 1491 aa27.34■■□□□ 1.97
RIPPLY3-201ENST00000329553 SLIT1O75093 1534 aa27.34■■□□□ 1.97
RIPPLY3-201ENST00000329553 ADAMTSL3P82987 1691 aa27.33■■□□□ 1.97
RIPPLY3-201ENST00000329553 PPP2R1AP30153 589 aa27.32■■□□□ 1.96
RIPPLY3-201ENST00000329553 FKBP8Q14318 412 aa27.32■■□□□ 1.96
RIPPLY3-201ENST00000329553 CDK19Q9BWU1 502 aa27.31■■□□□ 1.96
RIPPLY3-201ENST00000329553 NSD3Q9BZ95 1437 aa27.3■■□□□ 1.96
RIPPLY3-201ENST00000329553 MYT1Q01538 1121 aa27.29■■□□□ 1.96
RIPPLY3-201ENST00000329553 TSHZ2Q9NRE2 1034 aa27.29■■□□□ 1.96
RIPPLY3-201ENST00000329553 ZBED9Q6R2W3 1325 aa27.28■■□□□ 1.96
RIPPLY3-201ENST00000329553 SIRT1Q96EB6 747 aa27.28■■□□□ 1.96
RIPPLY3-201ENST00000329553 TECPR2O15040 1411 aa27.28■■□□□ 1.96
RIPPLY3-201ENST00000329553 ATAD2Q6PL18 1390 aa27.27■■□□□ 1.96
RIPPLY3-201ENST00000329553 ANKRD36BQ8N2N9 1353 aa27.27■■□□□ 1.96
RIPPLY3-201ENST00000329553 SLC26A8Q96RN1 970 aa27.27■■□□□ 1.96
RIPPLY3-201ENST00000329553 MED14O60244 1454 aa27.27■■□□□ 1.96
RIPPLY3-201ENST00000329553 KNDC1Q76NI1 1749 aa27.26■■□□□ 1.95
RIPPLY3-201ENST00000329553 NINLQ9Y2I6 1382 aa27.25■■□□□ 1.95
RIPPLY3-201ENST00000329553 FAM135BQ49AJ0 1406 aa27.25■■□□□ 1.95
RIPPLY3-201ENST00000329553 CEP170BQ9Y4F5 1589 aaPredicted RBP27.24■■□□□ 1.95
RIPPLY3-201ENST00000329553 NEFLP07196 543 aa27.22■■□□□ 1.95
RIPPLY3-201ENST00000329553 CPS1P31327 1500 aa27.22■■□□□ 1.95
RIPPLY3-201ENST00000329553 TBX22Q9Y458 520 aa27.21■■□□□ 1.95
RIPPLY3-201ENST00000329553 ROBO2Q9HCK4 1378 aa27.21■■□□□ 1.95
RIPPLY3-201ENST00000329553 A0A1W2PP64 1363 aa27.2■■□□□ 1.94
RIPPLY3-201ENST00000329553 CGNL1Q0VF96 1302 aa27.19■■□□□ 1.94
RIPPLY3-201ENST00000329553 USP32Q8NFA0 1604 aa27.19■■□□□ 1.94
RIPPLY3-201ENST00000329553 WASLO00401 505 aaPredicted RBP27.18■■□□□ 1.94
RIPPLY3-201ENST00000329553 PTPRUQ92729 1446 aa27.18■■□□□ 1.94
RIPPLY3-201ENST00000329553 SENP3-EIF4A1A0A087X0R7 540 aa27.18■■□□□ 1.94
RIPPLY3-201ENST00000329553 CABP1Q9NZU7 370 aa27.18■■□□□ 1.94
RIPPLY3-201ENST00000329553 CD163L1Q9NR16 1453 aa27.17■■□□□ 1.94
RIPPLY3-201ENST00000329553 SETD1BQ9UPS6 1966 aaKnown RBP27.17■■□□□ 1.94
RIPPLY3-201ENST00000329553 MORC1Q86VD1 984 aa27.17■■□□□ 1.94
RIPPLY3-201ENST00000329553 TERF2IPQ9NYB0 399 aa27.17■■□□□ 1.94
RIPPLY3-201ENST00000329553 AMOTL2Q9Y2J4 779 aa27.13■■□□□ 1.93
RIPPLY3-201ENST00000329553 ADAMTS8Q9UP79 889 aa27.12■■□□□ 1.93
RIPPLY3-201ENST00000329553 ZNF142P52746 1687 aaPredicted RBP27.11■■□□□ 1.93
RIPPLY3-201ENST00000329553 HDGFL2Q7Z4V5 671 aaPredicted RBP27.11■■□□□ 1.93
RIPPLY3-201ENST00000329553 INSRP06213 1382 aa27.1■■□□□ 1.93
RIPPLY3-201ENST00000329553 TNNT2P45379 298 aaPredicted RBP27.1■■□□□ 1.93
RIPPLY3-201ENST00000329553 NSD2O96028 1365 aa27.1■■□□□ 1.93
RIPPLY3-201ENST00000329553 DIP2AQ14689 1571 aa27.1■■□□□ 1.93
RIPPLY3-201ENST00000329553 ANKLE2Q86XL3 938 aa27.09■■□□□ 1.93
RIPPLY3-201ENST00000329553 NUDT16Q96DE0 195 aaKnown RBP27.08■■□□□ 1.93
RIPPLY3-201ENST00000329553 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.08■■□□□ 1.93
RIPPLY3-201ENST00000329553 BLMP54132 1417 aaPredicted RBP27.07■■□□□ 1.92
RIPPLY3-201ENST00000329553 WDR43Q15061 677 aaKnown RBP eCLIP27.07■■□□□ 1.92
RIPPLY3-201ENST00000329553 FYB1O15117 783 aa27.05■■□□□ 1.92
RIPPLY3-201ENST00000329553 ATP7BP35670 1465 aa27.05■■□□□ 1.92
RIPPLY3-201ENST00000329553 NCKAP5LQ9HCH0 1330 aa27.05■■□□□ 1.92
RIPPLY3-201ENST00000329553 GGNBP2Q9H3C7 697 aa27.04■■□□□ 1.92
RIPPLY3-201ENST00000329553 CCDC61Q9Y6R9 512 aa27.04■■□□□ 1.92
RIPPLY3-201ENST00000329553 PPIP5K1Q6PFW1 1433 aa27.04■■□□□ 1.92
RIPPLY3-201ENST00000329553 POLR3AO14802 1390 aaPredicted RBP27.03■■□□□ 1.92
RIPPLY3-201ENST00000329553 PRR36Q9H6K5 1346 aa27.02■■□□□ 1.92
RIPPLY3-201ENST00000329553 SALL2Q9Y467 1007 aaPredicted RBP27.02■■□□□ 1.92
RIPPLY3-201ENST00000329553 PTCH1Q13635 1447 aa27.02■■□□□ 1.92
RIPPLY3-201ENST00000329553 ADGRB2O60241 1585 aa27.02■■□□□ 1.92
RIPPLY3-201ENST00000329553 MTHFSP49914 203 aa27■■□□□ 1.91
RIPPLY3-201ENST00000329553 CPSF1Q10570 1443 aaKnown RBP27■■□□□ 1.91
RIPPLY3-201ENST00000329553 PIK3R4Q99570 1358 aa27■■□□□ 1.91
RIPPLY3-201ENST00000329553 KCNA6P17658 529 aa26.98■■□□□ 1.91
RIPPLY3-201ENST00000329553 XRN1Q8IZH2 1706 aaKnown RBP26.98■■□□□ 1.91
RIPPLY3-201ENST00000329553 SMG6Q86US8 1419 aaKnown RBP26.98■■□□□ 1.91
RIPPLY3-201ENST00000329553 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.97■■□□□ 1.91
RIPPLY3-201ENST00000329553 NUDCQ9Y266 331 aa26.96■■□□□ 1.91
RIPPLY3-201ENST00000329553 NUTM2FA1L443 756 aa26.95■■□□□ 1.9
RIPPLY3-201ENST00000329553 ANKRD26Q9UPS8 1709 aa26.95■■□□□ 1.9
RIPPLY3-201ENST00000329553 CDC42BPGQ6DT37 1551 aa26.94■■□□□ 1.9
RIPPLY3-201ENST00000329553 KIF20BQ96Q89 1820 aa26.92■■□□□ 1.9
RIPPLY3-201ENST00000329553 EDC4Q6P2E9 1401 aaKnown RBP26.92■■□□□ 1.9
RIPPLY3-201ENST00000329553 ZNF692Q9BU19 519 aaPredicted RBP26.9■■□□□ 1.9
RIPPLY3-201ENST00000329553 CCDC146Q8IYE0 955 aa26.9■■□□□ 1.9
RIPPLY3-201ENST00000329553 CFAP53Q96M91 514 aa26.9■■□□□ 1.9
RIPPLY3-201ENST00000329553 CHD2O14647 1828 aaKnown RBP26.89■■□□□ 1.9
RIPPLY3-201ENST00000329553 PLEKHG3A1L390 1219 aa26.89■■□□□ 1.89
RIPPLY3-201ENST00000329553 NPHP4O75161 1426 aaPredicted RBP26.89■■□□□ 1.89
RIPPLY3-201ENST00000329553 PDE3BQ13370 1112 aa26.89■■□□□ 1.89
RIPPLY3-201ENST00000329553 SHPRHQ149N8 1683 aa26.89■■□□□ 1.89
RIPPLY3-201ENST00000329553 AKAP12Q02952 1782 aa26.88■■□□□ 1.89
RIPPLY3-201ENST00000329553 MON2Q7Z3U7 1717 aa26.87■■□□□ 1.89
RIPPLY3-201ENST00000329553 TOPAZ1Q8N9V7 1692 aa26.87■■□□□ 1.89
RIPPLY3-201ENST00000329553 NME9Q86XW9 330 aa26.86■■□□□ 1.89
RIPPLY3-201ENST00000329553 ITSN1Q15811 1721 aa26.86■■□□□ 1.89
RIPPLY3-201ENST00000329553 ACEP12821 1306 aa26.86■■□□□ 1.89
RIPPLY3-201ENST00000329553 ERICH6BQ5W0A0 696 aa26.85■■□□□ 1.89
RIPPLY3-201ENST00000329553 CDCA7LQ96GN5 454 aa26.85■■□□□ 1.89
RIPPLY3-201ENST00000329553 ZRANB1Q9UGI0 708 aa26.84■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms