RNA–Protein interactions for RNA: ENST00000327351.6

CCDC107-201, Transcript of coiled-coil domain containing 107, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC107, Length 804 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107-201ENST00000327351 CCDC7Q96M83 1385 aa23.86■■□□□ 1.41
CCDC107-201ENST00000327351 ROBO2Q9HCK4 1378 aa23.86■■□□□ 1.41
CCDC107-201ENST00000327351 SLAIN2Q9P270 581 aa23.85■■□□□ 1.41
CCDC107-201ENST00000327351 YTHDC2Q9H6S0 1430 aaKnown RBP23.84■■□□□ 1.41
CCDC107-201ENST00000327351 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.84■■□□□ 1.41
CCDC107-201ENST00000327351 ABCC11Q96J66 1382 aa23.84■■□□□ 1.41
CCDC107-201ENST00000327351 DDX10Q13206 875 aaKnown RBP23.84■■□□□ 1.41
CCDC107-201ENST00000327351 ASXL1Q8IXJ9 1541 aa23.84■■□□□ 1.41
CCDC107-201ENST00000327351 DCCP43146 1447 aa23.84■■□□□ 1.41
CCDC107-201ENST00000327351 ADGRL3Q9HAR2 1447 aa23.84■■□□□ 1.41
CCDC107-201ENST00000327351 TESK2Q96S53 571 aa23.83■■□□□ 1.41
CCDC107-201ENST00000327351 TECPR2O15040 1411 aa23.83■■□□□ 1.4
CCDC107-201ENST00000327351 FAM135BQ49AJ0 1406 aa23.83■■□□□ 1.4
CCDC107-201ENST00000327351 KIF7Q2M1P5 1343 aa23.83■■□□□ 1.4
CCDC107-201ENST00000327351 EIF3AQ14152 1382 aaKnown RBP23.82■■□□□ 1.4
CCDC107-201ENST00000327351 HSPA1LP34931 641 aa23.81■■□□□ 1.4
CCDC107-201ENST00000327351 KNDC1Q76NI1 1749 aa23.8■■□□□ 1.4
CCDC107-201ENST00000327351 SIRT1Q96EB6 747 aa23.78■■□□□ 1.4
CCDC107-201ENST00000327351 TRAK1Q9UPV9 953 aa23.78■■□□□ 1.4
CCDC107-201ENST00000327351 NALCNQ8IZF0 1738 aa23.77■■□□□ 1.4
CCDC107-201ENST00000327351 WAPLQ7Z5K2 1190 aa23.76■■□□□ 1.39
CCDC107-201ENST00000327351 ROBO1Q9Y6N7 1651 aa23.76■■□□□ 1.39
CCDC107-201ENST00000327351 TMF1P82094 1093 aa23.74■■□□□ 1.39
CCDC107-201ENST00000327351 POGKQ9P215 609 aa23.73■■□□□ 1.39
CCDC107-201ENST00000327351 CENPJQ9HC77 1338 aaPredicted RBP23.73■■□□□ 1.39
CCDC107-201ENST00000327351 SLC24A1O60721 1099 aa23.72■■□□□ 1.39
CCDC107-201ENST00000327351 DLC1Q96QB1 1528 aa23.71■■□□□ 1.39
CCDC107-201ENST00000327351 MST1RQ04912 1400 aa23.71■■□□□ 1.39
CCDC107-201ENST00000327351 DISP3Q9P2K9 1392 aa23.71■■□□□ 1.39
CCDC107-201ENST00000327351 PRAM1Q96QH2 718 aa23.71■■□□□ 1.39
CCDC107-201ENST00000327351 PLEKHH1Q9ULM0 1364 aa23.7■■□□□ 1.38
CCDC107-201ENST00000327351 SBNO2Q9Y2G9 1366 aa23.69■■□□□ 1.38
CCDC107-201ENST00000327351 POLR3GLQ9BT43 218 aa23.69■■□□□ 1.38
CCDC107-201ENST00000327351 ARHGEF28Q8N1W1 1705 aaKnown RBP23.68■■□□□ 1.38
CCDC107-201ENST00000327351 CDC42BPGQ6DT37 1551 aa23.68■■□□□ 1.38
CCDC107-201ENST00000327351 SAFB2Q14151 953 aaKnown RBP eCLIP23.67■■□□□ 1.38
CCDC107-201ENST00000327351 BRINP3Q76B58 766 aa23.67■■□□□ 1.38
CCDC107-201ENST00000327351 C1orf167Q5SNV9 1468 aa23.65■■□□□ 1.38
CCDC107-201ENST00000327351 CDCA8Q53HL2 280 aa23.65■■□□□ 1.38
CCDC107-201ENST00000327351 MIER1Q8N108 512 aa23.65■■□□□ 1.38
CCDC107-201ENST00000327351 QRICH2Q9H0J4 1663 aa23.64■■□□□ 1.37
CCDC107-201ENST00000327351 PHLPP1O60346 1717 aa23.63■■□□□ 1.37
CCDC107-201ENST00000327351 AHDC1Q5TGY3 1603 aaPredicted RBP23.6■■□□□ 1.37
CCDC107-201ENST00000327351 NUTM2FA1L443 756 aa23.58■■□□□ 1.37
CCDC107-201ENST00000327351 ESCO1Q5FWF5 840 aa23.58■■□□□ 1.37
CCDC107-201ENST00000327351 ORAI2Q96SN7 254 aa23.58■■□□□ 1.37
CCDC107-201ENST00000327351 MINK1Q8N4C8 1332 aaPredicted RBP23.58■■□□□ 1.36
CCDC107-201ENST00000327351 FMN2Q9NZ56 1722 aa23.56■■□□□ 1.36
CCDC107-201ENST00000327351 PUS7Q96PZ0 661 aaKnown RBP23.55■■□□□ 1.36
CCDC107-201ENST00000327351 ADGRB2O60241 1585 aa23.55■■□□□ 1.36
CCDC107-201ENST00000327351 EVC2Q86UK5 1308 aa23.55■■□□□ 1.36
CCDC107-201ENST00000327351 JCADQ9P266 1359 aa23.54■■□□□ 1.36
CCDC107-201ENST00000327351 COL16A1Q07092 1604 aaPredicted RBP23.54■■□□□ 1.36
CCDC107-201ENST00000327351 NHSL1Q5SYE7 1610 aa23.53■■□□□ 1.36
CCDC107-201ENST00000327351 ANP32CO43423 234 aa23.52■■□□□ 1.36
CCDC107-201ENST00000327351 TULP4Q9NRJ4 1543 aa23.52■■□□□ 1.36
CCDC107-201ENST00000327351 WASLO00401 505 aaPredicted RBP23.51■■□□□ 1.35
CCDC107-201ENST00000327351 LRRC59Q96AG4 307 aaKnown RBP23.51■■□□□ 1.35
CCDC107-201ENST00000327351 DDX17Q92841 729 aaKnown RBP23.5■■□□□ 1.35
CCDC107-201ENST00000327351 NPHP3Q7Z494 1330 aa23.5■■□□□ 1.35
CCDC107-201ENST00000327351 ANKARQ7Z5J8 1434 aa23.5■■□□□ 1.35
CCDC107-201ENST00000327351 PANK3Q9H999 370 aa23.49■■□□□ 1.35
CCDC107-201ENST00000327351 MED1Q15648 1581 aaPredicted RBP23.48■■□□□ 1.35
CCDC107-201ENST00000327351 PHF8Q9UPP1 1060 aa23.47■■□□□ 1.35
CCDC107-201ENST00000327351 FOXO3O43524 673 aa23.46■■□□□ 1.35
CCDC107-201ENST00000327351 KIF1AQ12756 1690 aa23.46■■□□□ 1.35
CCDC107-201ENST00000327351 CABP2Q9NPB3 220 aa23.46■■□□□ 1.35
CCDC107-201ENST00000327351 SOS2Q07890 1332 aaPredicted RBP23.45■■□□□ 1.34
CCDC107-201ENST00000327351 PER1O15534 1290 aaPredicted RBP23.45■■□□□ 1.34
CCDC107-201ENST00000327351 CDK19Q9BWU1 502 aa23.45■■□□□ 1.34
CCDC107-201ENST00000327351 MYOM1P52179 1685 aa23.44■■□□□ 1.34
CCDC107-201ENST00000327351 SPATA31A6Q5VVP1 1343 aa23.44■■□□□ 1.34
CCDC107-201ENST00000327351 SRPK2P78362 688 aaKnown RBP23.43■■□□□ 1.34
CCDC107-201ENST00000327351 PHF23Q9BUL5 403 aaPredicted RBP23.43■■□□□ 1.34
CCDC107-201ENST00000327351 SHPRHQ149N8 1683 aa23.42■■□□□ 1.34
CCDC107-201ENST00000327351 RGPD8O14715 1765 aaPredicted RBP23.41■■□□□ 1.34
CCDC107-201ENST00000327351 USP32Q8NFA0 1604 aa23.41■■□□□ 1.34
CCDC107-201ENST00000327351 PMFBP1Q8TBY8 1022 aa23.4■■□□□ 1.34
CCDC107-201ENST00000327351 NUDT16Q96DE0 195 aaKnown RBP23.4■■□□□ 1.34
CCDC107-201ENST00000327351 PRKRIP1Q9H875 184 aaPredicted RBP23.4■■□□□ 1.34
CCDC107-201ENST00000327351 ATAD2Q6PL18 1390 aa23.4■■□□□ 1.34
CCDC107-201ENST00000327351 PRR36Q9H6K5 1346 aa23.39■■□□□ 1.34
CCDC107-201ENST00000327351 XPCQ01831 940 aaPredicted RBP23.39■■□□□ 1.33
CCDC107-201ENST00000327351 PSME1Q06323 249 aa23.39■■□□□ 1.33
CCDC107-201ENST00000327351 KRT28Q7Z3Y7 464 aa23.39■■□□□ 1.33
CCDC107-201ENST00000327351 TMC1Q8TDI8 760 aa23.39■■□□□ 1.33
CCDC107-201ENST00000327351 SLC12A5Q9H2X9 1139 aa23.39■■□□□ 1.33
CCDC107-201ENST00000327351 PXDNQ92626 1479 aa23.38■■□□□ 1.33
CCDC107-201ENST00000327351 CCER2I3L3R5 266 aa23.38■■□□□ 1.33
CCDC107-201ENST00000327351 PNPLA6Q8IY17 1366 aa23.38■■□□□ 1.33
CCDC107-201ENST00000327351 NUTM2BA6NNL0 878 aaPredicted RBP23.36■■□□□ 1.33
CCDC107-201ENST00000327351 NUTM2EB1AL46 878 aaPredicted RBP23.36■■□□□ 1.33
CCDC107-201ENST00000327351 MEX3CQ5U5Q3 659 aaKnown RBP23.36■■□□□ 1.33
CCDC107-201ENST00000327351 NUTM2AQ8IVF1 878 aaPredicted RBP23.36■■□□□ 1.33
CCDC107-201ENST00000327351 NGDNQ8NEJ9 315 aaKnown RBP23.36■■□□□ 1.33
CCDC107-201ENST00000327351 NINLQ9Y2I6 1382 aa23.36■■□□□ 1.33
CCDC107-201ENST00000327351 ITSN1Q15811 1721 aa23.36■■□□□ 1.33
CCDC107-201ENST00000327351 ATP7BP35670 1465 aa23.36■■□□□ 1.33
CCDC107-201ENST00000327351 CCDC61Q9Y6R9 512 aa23.35■■□□□ 1.33
CCDC107-201ENST00000327351 CARD14Q9BXL6 1004 aa23.34■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 130.3 ms