RNA–Protein interactions for RNA: ENST00000323441.10

HIF1A-201, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,555 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-201ENST00000323441 E9PCH4 1651 aa5.06□□□□□ -1.6
HIF1A-201ENST00000323441 ZNF777Q9ULD5 760 aaPredicted RBP5.06□□□□□ -1.6
HIF1A-201ENST00000323441 ADGRL2O95490 1459 aa5.06□□□□□ -1.6
HIF1A-201ENST00000323441 IDI1Q13907 227 aa5.05□□□□□ -1.6
HIF1A-201ENST00000323441 DEFB132Q7Z7B7 95 aa5.05□□□□□ -1.6
HIF1A-201ENST00000323441 ZNF784Q8NCA9 323 aaPredicted RBP5.05□□□□□ -1.6
HIF1A-201ENST00000323441 NRKQ7Z2Y5 1582 aa5.05□□□□□ -1.6
HIF1A-201ENST00000323441 PEAK1Q9H792 1746 aa5.05□□□□□ -1.6
HIF1A-201ENST00000323441 QSER1Q2KHR3 1735 aa5.04□□□□□ -1.6
HIF1A-201ENST00000323441 SBF2Q86WG5 1849 aa5.03□□□□□ -1.6
HIF1A-201ENST00000323441 SLC52A1Q9NWF4 448 aa5.03□□□□□ -1.6
HIF1A-201ENST00000323441 FMN2Q9NZ56 1722 aa5.03□□□□□ -1.6
HIF1A-201ENST00000323441 COL14A1Q05707 1796 aaKnown RBP5.03□□□□□ -1.6
HIF1A-201ENST00000323441 KNDC1Q76NI1 1749 aa5.03□□□□□ -1.6
HIF1A-201ENST00000323441 ATF3P18847 181 aa5.03□□□□□ -1.6
HIF1A-201ENST00000323441 TRPM3Q9HCF6 1732 aaPredicted RBP5.03□□□□□ -1.6
HIF1A-201ENST00000323441 ADRA2BP18089 450 aa5.03□□□□□ -1.6
HIF1A-201ENST00000323441 ALS2Q96Q42 1657 aa5.02□□□□□ -1.61
HIF1A-201ENST00000323441 SENP3-EIF4A1A0A087X0R7 540 aa5.01□□□□□ -1.61
HIF1A-201ENST00000323441 PSDA5PKW4 1024 aaPredicted RBP5.01□□□□□ -1.61
HIF1A-201ENST00000323441 VPS72Q15906 364 aa5.01□□□□□ -1.61
HIF1A-201ENST00000323441 UNC5CLQ8IV45 518 aa5.01□□□□□ -1.61
HIF1A-201ENST00000323441 CAMKK2Q96RR4 588 aa5.01□□□□□ -1.61
HIF1A-201ENST00000323441 MAP3K5Q99683 1374 aa5.01□□□□□ -1.61
HIF1A-201ENST00000323441 PARP4Q9UKK3 1724 aaKnown RBP5.01□□□□□ -1.61
HIF1A-201ENST00000323441 DLC1Q96QB1 1528 aa5.01□□□□□ -1.61
HIF1A-201ENST00000323441 WNK3Q9BYP7 1800 aa5□□□□□ -1.61
HIF1A-201ENST00000323441 IFT172Q9UG01 1749 aa5□□□□□ -1.61
HIF1A-201ENST00000323441 PPP1R15AO75807 674 aaPredicted RBP5□□□□□ -1.61
HIF1A-201ENST00000323441 PAPPAQ13219 1627 aa5□□□□□ -1.61
HIF1A-201ENST00000323441 BAG6P46379 1132 aa5□□□□□ -1.61
HIF1A-201ENST00000323441 ABCC5O15440 1437 aa4.99□□□□□ -1.61
HIF1A-201ENST00000323441 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.99□□□□□ -1.61
HIF1A-201ENST00000323441 PCDH10Q9P2E7 1040 aa4.99□□□□□ -1.61
HIF1A-201ENST00000323441 RRBP1Q9P2E9 1410 aaKnown RBP4.99□□□□□ -1.61
HIF1A-201ENST00000323441 RANGAP1P46060 587 aaPredicted RBP4.99□□□□□ -1.61
HIF1A-201ENST00000323441 MYOM3Q5VTT5 1437 aa4.99□□□□□ -1.61
HIF1A-201ENST00000323441 SEPT12Q8IYM1 358 aa4.99□□□□□ -1.61
HIF1A-201ENST00000323441 DDX17Q92841 729 aaKnown RBP4.99□□□□□ -1.61
HIF1A-201ENST00000323441 ADAMTS2O95450 1211 aa4.98□□□□□ -1.61
HIF1A-201ENST00000323441 R3HDM1Q15032 1099 aaKnown RBP4.98□□□□□ -1.61
HIF1A-201ENST00000323441 ATP1B4Q9UN42 357 aaPredicted RBP4.98□□□□□ -1.61
HIF1A-201ENST00000323441 AMOTL2Q9Y2J4 779 aa4.98□□□□□ -1.61
HIF1A-201ENST00000323441 KIF15Q9NS87 1388 aa4.98□□□□□ -1.61
HIF1A-201ENST00000323441 KRT27Q7Z3Y8 459 aa4.98□□□□□ -1.61
HIF1A-201ENST00000323441 METP08581 1390 aa4.98□□□□□ -1.61
HIF1A-201ENST00000323441 CEP350Q5VT06 3117 aa4.97□□□□□ -1.61
HIF1A-201ENST00000323441 HDGFP51858 240 aaKnown RBP4.97□□□□□ -1.61
HIF1A-201ENST00000323441 SF3B2Q13435 895 aaKnown RBP4.97□□□□□ -1.61
HIF1A-201ENST00000323441 KANK1Q14678 1352 aa4.97□□□□□ -1.61
HIF1A-201ENST00000323441 RGPD8O14715 1765 aaPredicted RBP4.97□□□□□ -1.61
HIF1A-201ENST00000323441 PPLO60437 1756 aa4.97□□□□□ -1.61
HIF1A-201ENST00000323441 KCNQ2O43526 872 aa4.96□□□□□ -1.62
HIF1A-201ENST00000323441 HFM1A2PYH4 1435 aa4.96□□□□□ -1.62
HIF1A-201ENST00000323441 PHRF1Q9P1Y6 1649 aaKnown RBP4.96□□□□□ -1.62
HIF1A-201ENST00000323441 WDR90Q96KV7 1748 aa4.96□□□□□ -1.62
HIF1A-201ENST00000323441 TSPY4P0CV99 314 aa4.96□□□□□ -1.62
HIF1A-201ENST00000323441 TSPY10P0CW01 314 aa4.96□□□□□ -1.62
HIF1A-201ENST00000323441 EN1Q05925 392 aaPredicted RBP4.96□□□□□ -1.62
HIF1A-201ENST00000323441 DAPK1P53355 1430 aa4.96□□□□□ -1.62
HIF1A-201ENST00000323441 LMO7Q8WWI1 1683 aa4.95□□□□□ -1.62
HIF1A-201ENST00000323441 TECPR2O15040 1411 aa4.95□□□□□ -1.62
HIF1A-201ENST00000323441 SGIP1Q9BQI5 828 aa4.95□□□□□ -1.62
HIF1A-201ENST00000323441 PTGER2P43116 358 aa4.95□□□□□ -1.62
HIF1A-201ENST00000323441 EZH2Q15910 746 aaKnown RBP4.95□□□□□ -1.62
HIF1A-201ENST00000323441 SPATA31A3Q5VYP0 1347 aa4.94□□□□□ -1.62
HIF1A-201ENST00000323441 KIF1BO60333 1816 aa4.94□□□□□ -1.62
HIF1A-201ENST00000323441 ADCY9O60503 1353 aa4.94□□□□□ -1.62
HIF1A-201ENST00000323441 ARHGEF28Q8N1W1 1705 aaKnown RBP4.94□□□□□ -1.62
HIF1A-201ENST00000323441 TNS3Q68CZ2 1445 aa4.94□□□□□ -1.62
HIF1A-201ENST00000323441 CLTCL1P53675 1640 aa4.94□□□□□ -1.62
HIF1A-201ENST00000323441 CICQ96RK0 1608 aaPredicted RBP4.94□□□□□ -1.62
HIF1A-201ENST00000323441 SPON1Q9HCB6 807 aa4.94□□□□□ -1.62
HIF1A-201ENST00000323441 QRICH2Q9H0J4 1663 aa4.94□□□□□ -1.62
HIF1A-201ENST00000323441 NPHP3Q7Z494 1330 aa4.94□□□□□ -1.62
HIF1A-201ENST00000323441 SBNO1A3KN83 1393 aa4.93□□□□□ -1.62
HIF1A-201ENST00000323441 ROBO2Q9HCK4 1378 aa4.93□□□□□ -1.62
HIF1A-201ENST00000323441 LRRC37A3O60309 1634 aa4.93□□□□□ -1.62
HIF1A-201ENST00000323441 CCDC144AA2RUR9 1427 aa4.93□□□□□ -1.62
HIF1A-201ENST00000323441 BCL9O00512 1426 aa4.93□□□□□ -1.62
HIF1A-201ENST00000323441 ORAI2Q96SN7 254 aa4.93□□□□□ -1.62
HIF1A-201ENST00000323441 NRXN1Q9ULB1 1477 aa4.93□□□□□ -1.62
HIF1A-201ENST00000323441 TUBGCP6Q96RT7 1819 aa4.93□□□□□ -1.62
HIF1A-201ENST00000323441 STAG3Q9UJ98 1225 aa4.93□□□□□ -1.62
HIF1A-201ENST00000323441 LRPPRCP42704 1394 aaKnown RBP4.92□□□□□ -1.62
HIF1A-201ENST00000323441 KIAA1210Q9ULL0 1709 aa4.92□□□□□ -1.62
HIF1A-201ENST00000323441 PRELPP51888 382 aa4.92□□□□□ -1.62
HIF1A-201ENST00000323441 SPATA31A5Q5VU36 1347 aa4.92□□□□□ -1.62
HIF1A-201ENST00000323441 SPATA31A7Q8IWB4 1347 aa4.92□□□□□ -1.62
HIF1A-201ENST00000323441 TRPM1Q7Z4N2 1603 aa4.92□□□□□ -1.62
HIF1A-201ENST00000323441 C14orf37Q86TY3 774 aa4.92□□□□□ -1.62
HIF1A-201ENST00000323441 UTRNP46939 3433 aa4.92□□□□□ -1.62
HIF1A-201ENST00000323441 AATKQ6ZMQ8 1374 aa4.92□□□□□ -1.62
HIF1A-201ENST00000323441 GIGYF1O75420 1035 aaPredicted RBP4.91□□□□□ -1.62
HIF1A-201ENST00000323441 ATP7BP35670 1465 aa4.91□□□□□ -1.62
HIF1A-201ENST00000323441 AKAP12Q02952 1782 aa4.91□□□□□ -1.62
HIF1A-201ENST00000323441 TOPAZ1Q8N9V7 1692 aa4.91□□□□□ -1.62
HIF1A-201ENST00000323441 DCAF8L1A6NGE4 600 aa4.9□□□□□ -1.62
HIF1A-201ENST00000323441 DNAJC5GQ8N7S2 189 aa4.9□□□□□ -1.62
HIF1A-201ENST00000323441 NHSQ6T4R5 1651 aa4.9□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms