RNA–Protein interactions for RNA: ENST00000323347.14

SMARCD2-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 2 BASIC

Gene SMARCD2, Length 1,935 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-202ENST00000323347 PREX1Q8TCU6 1659 aa20.81■□□□□ 0.92
SMARCD2-202ENST00000323347 TMEM131LA2VDJ0 1609 aa20.81■□□□□ 0.92
SMARCD2-202ENST00000323347 TULP4Q9NRJ4 1543 aa20.8■□□□□ 0.92
SMARCD2-202ENST00000323347 SLC12A5Q9H2X9 1139 aa20.79■□□□□ 0.92
SMARCD2-202ENST00000323347 EVC2Q86UK5 1308 aa20.79■□□□□ 0.92
SMARCD2-202ENST00000323347 TCERG1O14776 1098 aaKnown RBP20.78■□□□□ 0.92
SMARCD2-202ENST00000323347 PPP6R1Q9UPN7 881 aa20.78■□□□□ 0.92
SMARCD2-202ENST00000323347 NSD2O96028 1365 aa20.78■□□□□ 0.92
SMARCD2-202ENST00000323347 AGLP35573 1532 aa20.77■□□□□ 0.92
SMARCD2-202ENST00000323347 ANKRD36BQ8N2N9 1353 aa20.77■□□□□ 0.92
SMARCD2-202ENST00000323347 SHPRHQ149N8 1683 aa20.77■□□□□ 0.91
SMARCD2-202ENST00000323347 NINLQ9Y2I6 1382 aa20.76■□□□□ 0.91
SMARCD2-202ENST00000323347 APAF1O14727 1248 aa20.76■□□□□ 0.91
SMARCD2-202ENST00000323347 PLIN1O60240 522 aa20.76■□□□□ 0.91
SMARCD2-202ENST00000323347 CRBNQ96SW2 442 aa20.76■□□□□ 0.91
SMARCD2-202ENST00000323347 MS4A1P11836 297 aa20.75■□□□□ 0.91
SMARCD2-202ENST00000323347 MORC1Q86VD1 984 aa20.75■□□□□ 0.91
SMARCD2-202ENST00000323347 NCBP3Q53F19 620 aaKnown RBP20.74■□□□□ 0.91
SMARCD2-202ENST00000323347 NKTRP30414 1462 aaKnown RBP20.74■□□□□ 0.91
SMARCD2-202ENST00000323347 CGNL1Q0VF96 1302 aa20.74■□□□□ 0.91
SMARCD2-202ENST00000323347 E9PSI1 815 aa20.74■□□□□ 0.91
SMARCD2-202ENST00000323347 CCDC146Q8IYE0 955 aa20.73■□□□□ 0.91
SMARCD2-202ENST00000323347 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.72■□□□□ 0.91
SMARCD2-202ENST00000323347 FBXO41Q8TF61 875 aa20.71■□□□□ 0.91
SMARCD2-202ENST00000323347 PTPRMP28827 1452 aa20.71■□□□□ 0.91
SMARCD2-202ENST00000323347 MYO5BQ9ULV0 1848 aa20.7■□□□□ 0.9
SMARCD2-202ENST00000323347 PHF23Q9BUL5 403 aaPredicted RBP20.7■□□□□ 0.9
SMARCD2-202ENST00000323347 C20orf194Q5TEA3 1177 aa20.69■□□□□ 0.9
SMARCD2-202ENST00000323347 SPINK5Q9NQ38 1064 aaPredicted RBP20.69■□□□□ 0.9
SMARCD2-202ENST00000323347 CLTCQ00610 1675 aaKnown RBP20.69■□□□□ 0.9
SMARCD2-202ENST00000323347 IQSEC2Q5JU85 1478 aa20.69■□□□□ 0.9
SMARCD2-202ENST00000323347 KDM2BQ8NHM5 1336 aa20.68■□□□□ 0.9
SMARCD2-202ENST00000323347 NUTM2DQ5VT03 806 aaPredicted RBP20.67■□□□□ 0.9
SMARCD2-202ENST00000323347 RUNDC1Q96C34 613 aa20.67■□□□□ 0.9
SMARCD2-202ENST00000323347 ABCC11Q96J66 1382 aa20.66■□□□□ 0.9
SMARCD2-202ENST00000323347 YTHDC2Q9H6S0 1430 aaKnown RBP20.66■□□□□ 0.9
SMARCD2-202ENST00000323347 WWC1Q8IX03 1113 aa20.66■□□□□ 0.9
SMARCD2-202ENST00000323347 MED14O60244 1454 aa20.66■□□□□ 0.9
SMARCD2-202ENST00000323347 ATAD2Q6PL18 1390 aa20.65■□□□□ 0.9
SMARCD2-202ENST00000323347 ALKQ9UM73 1620 aa20.65■□□□□ 0.9
SMARCD2-202ENST00000323347 CCDC27Q2M243 656 aa20.65■□□□□ 0.9
SMARCD2-202ENST00000323347 MTHFSP49914 203 aa20.64■□□□□ 0.89
SMARCD2-202ENST00000323347 CFAP53Q96M91 514 aa20.64■□□□□ 0.89
SMARCD2-202ENST00000323347 SPATA31D1Q6ZQQ2 1576 aa20.64■□□□□ 0.89
SMARCD2-202ENST00000323347 CABP2Q9NPB3 220 aa20.63■□□□□ 0.89
SMARCD2-202ENST00000323347 FBXO31Q5XUX0 539 aaPredicted RBP20.63■□□□□ 0.89
SMARCD2-202ENST00000323347 CENPQQ7L2Z9 268 aaPredicted RBP20.62■□□□□ 0.89
SMARCD2-202ENST00000323347 WDR63Q8IWG1 891 aa20.62■□□□□ 0.89
SMARCD2-202ENST00000323347 BACH2Q9BYV9 841 aa20.62■□□□□ 0.89
SMARCD2-202ENST00000323347 DMRT2Q9Y5R5 561 aa20.62■□□□□ 0.89
SMARCD2-202ENST00000323347 DLC1Q96QB1 1528 aa20.62■□□□□ 0.89
SMARCD2-202ENST00000323347 PDE4AP27815 886 aa20.61■□□□□ 0.89
SMARCD2-202ENST00000323347 A0A1W2PP64 1363 aa20.61■□□□□ 0.89
SMARCD2-202ENST00000323347 ANP32AP39687 249 aaKnown RBP20.61■□□□□ 0.89
SMARCD2-202ENST00000323347 ERICH6Q7L0X2 663 aa20.61■□□□□ 0.89
SMARCD2-202ENST00000323347 CD163L1Q9NR16 1453 aa20.6■□□□□ 0.89
SMARCD2-202ENST00000323347 IPO9Q96P70 1041 aaKnown RBP20.6■□□□□ 0.89
SMARCD2-202ENST00000323347 NOP58Q9Y2X3 529 aaKnown RBP20.59■□□□□ 0.89
SMARCD2-202ENST00000323347 ARHGEF40Q8TER5 1519 aa20.59■□□□□ 0.89
SMARCD2-202ENST00000323347 A2ML1A8K2U0 1454 aa20.59■□□□□ 0.89
SMARCD2-202ENST00000323347 PDE3AQ14432 1141 aa20.59■□□□□ 0.89
SMARCD2-202ENST00000323347 ADGRB2O60241 1585 aa20.58■□□□□ 0.89
SMARCD2-202ENST00000323347 ANKRD26Q9UPS8 1709 aa20.58■□□□□ 0.89
SMARCD2-202ENST00000323347 TCP11L2Q8N4U5 519 aa20.58■□□□□ 0.88
SMARCD2-202ENST00000323347 NLRP1Q9C000 1473 aa20.58■□□□□ 0.88
SMARCD2-202ENST00000323347 PRAM1Q96QH2 718 aa20.57■□□□□ 0.88
SMARCD2-202ENST00000323347 TERF2IPQ9NYB0 399 aa20.57■□□□□ 0.88
SMARCD2-202ENST00000323347 STK26Q9P289 416 aa20.57■□□□□ 0.88
SMARCD2-202ENST00000323347 TNNT2P45379 298 aaPredicted RBP20.56■□□□□ 0.88
SMARCD2-202ENST00000323347 COL3A1P02461 1466 aaPredicted RBP20.55■□□□□ 0.88
SMARCD2-202ENST00000323347 SRPK2P78362 688 aaKnown RBP20.55■□□□□ 0.88
SMARCD2-202ENST00000323347 SETD1AO15047 1707 aaKnown RBP20.55■□□□□ 0.88
SMARCD2-202ENST00000323347 BCAR3O75815 825 aa20.55■□□□□ 0.88
SMARCD2-202ENST00000323347 POGKQ9P215 609 aa20.53■□□□□ 0.88
SMARCD2-202ENST00000323347 FYB1O15117 783 aa20.52■□□□□ 0.88
SMARCD2-202ENST00000323347 SAFB2Q14151 953 aaKnown RBP eCLIP20.52■□□□□ 0.88
SMARCD2-202ENST00000323347 RIMS2Q9UQ26 1411 aa20.52■□□□□ 0.87
SMARCD2-202ENST00000323347 MINK1Q8N4C8 1332 aaPredicted RBP20.51■□□□□ 0.87
SMARCD2-202ENST00000323347 PNPLA6Q8IY17 1366 aa20.51■□□□□ 0.87
SMARCD2-202ENST00000323347 AAMPQ13685 434 aa20.51■□□□□ 0.87
SMARCD2-202ENST00000323347 CDK19Q9BWU1 502 aa20.5■□□□□ 0.87
SMARCD2-202ENST00000323347 STAG3Q9UJ98 1225 aa20.49■□□□□ 0.87
SMARCD2-202ENST00000323347 RARSP54136 660 aaKnown RBP20.49■□□□□ 0.87
SMARCD2-202ENST00000323347 PLEKHF1Q96S99 279 aa20.49■□□□□ 0.87
SMARCD2-202ENST00000323347 PAK3O75914 559 aaPredicted RBP20.48■□□□□ 0.87
SMARCD2-202ENST00000323347 HDGFL2Q7Z4V5 671 aaPredicted RBP20.48■□□□□ 0.87
SMARCD2-202ENST00000323347 ATP7BP35670 1465 aa20.48■□□□□ 0.87
SMARCD2-202ENST00000323347 CT47B1P0C2W7 299 aaPredicted RBP20.47■□□□□ 0.87
SMARCD2-202ENST00000323347 U2AF1L5P0DN76 240 aaPredicted RBP20.47■□□□□ 0.87
SMARCD2-202ENST00000323347 U2AF1Q01081 240 aaKnown RBP eCLIP20.47■□□□□ 0.87
SMARCD2-202ENST00000323347 ZBTB47Q9UFB7 747 aaPredicted RBP20.47■□□□□ 0.87
SMARCD2-202ENST00000323347 RRP7AQ9Y3A4 280 aaKnown RBP20.47■□□□□ 0.87
SMARCD2-202ENST00000323347 SIRT1Q96EB6 747 aa20.46■□□□□ 0.87
SMARCD2-202ENST00000323347 GGNBP2Q9H3C7 697 aa20.46■□□□□ 0.87
SMARCD2-202ENST00000323347 MYH16Q9H6N6 1097 aa20.46■□□□□ 0.87
SMARCD2-202ENST00000323347 NRXN3Q9Y4C0 1643 aa20.45■□□□□ 0.86
SMARCD2-202ENST00000323347 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.45■□□□□ 0.86
SMARCD2-202ENST00000323347 CDC42BPGQ6DT37 1551 aa20.45■□□□□ 0.86
SMARCD2-202ENST00000323347 KIF20BQ96Q89 1820 aa20.44■□□□□ 0.86
SMARCD2-202ENST00000323347 NEUROD2Q15784 382 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms