RNA–Protein interactions for RNA: ENST00000321358.11

YBX1-201, Transcript of Y-box binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene YBX1, Length 1,514 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1-201ENST00000321358 MINK1Q8N4C8 1332 aaPredicted RBP29.62■■■□□ 2.33
YBX1-201ENST00000321358 NCOA3Q9Y6Q9 1424 aa29.61■■■□□ 2.33
YBX1-201ENST00000321358 HIRIP3Q9BW71 556 aaPredicted RBP29.61■■■□□ 2.33
YBX1-201ENST00000321358 ARHGEF28Q8N1W1 1705 aaKnown RBP29.58■■■□□ 2.33
YBX1-201ENST00000321358 IQSEC2Q5JU85 1478 aa29.58■■■□□ 2.33
YBX1-201ENST00000321358 SBNO2Q9Y2G9 1366 aa29.58■■■□□ 2.33
YBX1-201ENST00000321358 TMF1P82094 1093 aa29.57■■■□□ 2.32
YBX1-201ENST00000321358 C19orf44Q9H6X5 657 aa29.57■■■□□ 2.32
YBX1-201ENST00000321358 TESK2Q96S53 571 aa29.56■■■□□ 2.32
YBX1-201ENST00000321358 LRRC7Q96NW7 1537 aa29.56■■■□□ 2.32
YBX1-201ENST00000321358 EVC2Q86UK5 1308 aa29.56■■■□□ 2.32
YBX1-201ENST00000321358 STRCP1A6NGW2 1772 aa29.55■■■□□ 2.32
YBX1-201ENST00000321358 MSH6P52701 1360 aa29.53■■■□□ 2.32
YBX1-201ENST00000321358 ADGRL3Q9HAR2 1447 aa29.53■■■□□ 2.32
YBX1-201ENST00000321358 CDCA8Q53HL2 280 aa29.52■■■□□ 2.32
YBX1-201ENST00000321358 WASLO00401 505 aaPredicted RBP29.51■■■□□ 2.32
YBX1-201ENST00000321358 ATF3P18847 181 aa29.51■■■□□ 2.32
YBX1-201ENST00000321358 SRPK2P78362 688 aaKnown RBP29.5■■■□□ 2.31
YBX1-201ENST00000321358 CDK19Q9BWU1 502 aa29.49■■■□□ 2.31
YBX1-201ENST00000321358 CADPS2Q86UW7 1296 aa29.48■■■□□ 2.31
YBX1-201ENST00000321358 QRICH2Q9H0J4 1663 aa29.47■■■□□ 2.31
YBX1-201ENST00000321358 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.43■■■□□ 2.3
YBX1-201ENST00000321358 DCCP43146 1447 aa29.43■■■□□ 2.3
YBX1-201ENST00000321358 PUS7Q96PZ0 661 aaKnown RBP29.42■■■□□ 2.3
YBX1-201ENST00000321358 POLR3GLQ9BT43 218 aa29.42■■■□□ 2.3
YBX1-201ENST00000321358 CABP2Q9NPB3 220 aa29.42■■■□□ 2.3
YBX1-201ENST00000321358 DISP3Q9P2K9 1392 aa29.4■■■□□ 2.3
YBX1-201ENST00000321358 NUTM2FA1L443 756 aa29.4■■■□□ 2.3
YBX1-201ENST00000321358 ADGRB2O60241 1585 aa29.39■■■□□ 2.3
YBX1-201ENST00000321358 ZNF316A6NFI3 1004 aaPredicted RBP29.39■■■□□ 2.3
YBX1-201ENST00000321358 CDC42BPGQ6DT37 1551 aa29.37■■■□□ 2.29
YBX1-201ENST00000321358 ATAD2Q6PL18 1390 aa29.37■■■□□ 2.29
YBX1-201ENST00000321358 NALCNQ8IZF0 1738 aa29.37■■■□□ 2.29
YBX1-201ENST00000321358 UBAP1LF5GYI3 381 aa29.36■■■□□ 2.29
YBX1-201ENST00000321358 NUDT16Q96DE0 195 aaKnown RBP29.36■■■□□ 2.29
YBX1-201ENST00000321358 TULP4Q9NRJ4 1543 aa29.36■■■□□ 2.29
YBX1-201ENST00000321358 CCDC61Q9Y6R9 512 aa29.35■■■□□ 2.29
YBX1-201ENST00000321358 C11orf95C9JLR9 678 aaPredicted RBP29.35■■■□□ 2.29
YBX1-201ENST00000321358 TOM1O60784 492 aa29.34■■■□□ 2.29
YBX1-201ENST00000321358 SLAIN2Q9P270 581 aa29.33■■■□□ 2.29
YBX1-201ENST00000321358 KIF7Q2M1P5 1343 aa29.32■■■□□ 2.28
YBX1-201ENST00000321358 ANKARQ7Z5J8 1434 aa29.32■■■□□ 2.28
YBX1-201ENST00000321358 TMC1Q8TDI8 760 aa29.32■■■□□ 2.28
YBX1-201ENST00000321358 ESCO1Q5FWF5 840 aa29.3■■■□□ 2.28
YBX1-201ENST00000321358 XIRP1Q702N8 1843 aaKnown RBP29.29■■■□□ 2.28
YBX1-201ENST00000321358 CCDC7Q96M83 1385 aa29.29■■■□□ 2.28
YBX1-201ENST00000321358 WASHC2AQ641Q2 1341 aa29.28■■■□□ 2.28
YBX1-201ENST00000321358 PRR36Q9H6K5 1346 aa29.28■■■□□ 2.28
YBX1-201ENST00000321358 MST1RQ04912 1400 aa29.26■■■□□ 2.28
YBX1-201ENST00000321358 CABP1Q9NZU7 370 aa29.26■■■□□ 2.27
YBX1-201ENST00000321358 C1orf167Q5SNV9 1468 aa29.26■■■□□ 2.27
YBX1-201ENST00000321358 NINLQ9Y2I6 1382 aa29.25■■■□□ 2.27
YBX1-201ENST00000321358 ATP7BP35670 1465 aa29.24■■■□□ 2.27
YBX1-201ENST00000321358 PHF8Q9UPP1 1060 aa29.24■■■□□ 2.27
YBX1-201ENST00000321358 FMN2Q9NZ56 1722 aa29.24■■■□□ 2.27
YBX1-201ENST00000321358 ORAI2Q96SN7 254 aa29.23■■■□□ 2.27
YBX1-201ENST00000321358 SLC12A5Q9H2X9 1139 aa29.23■■■□□ 2.27
YBX1-201ENST00000321358 PPIP5K1Q6PFW1 1433 aa29.23■■■□□ 2.27
YBX1-201ENST00000321358 NGDNQ8NEJ9 315 aaKnown RBP29.22■■■□□ 2.27
YBX1-201ENST00000321358 PLEKHG3A1L390 1219 aa29.21■■■□□ 2.27
YBX1-201ENST00000321358 PMFBP1Q8TBY8 1022 aa29.21■■■□□ 2.27
YBX1-201ENST00000321358 TERF2IPQ9NYB0 399 aa29.21■■■□□ 2.27
YBX1-201ENST00000321358 HDGFL2Q7Z4V5 671 aaPredicted RBP29.2■■■□□ 2.26
YBX1-201ENST00000321358 SCAF1Q9H7N4 1312 aaKnown RBP29.18■■■□□ 2.26
YBX1-201ENST00000321358 PIP4K2BP78356 416 aa29.18■■■□□ 2.26
YBX1-201ENST00000321358 BRINP3Q76B58 766 aa29.16■■■□□ 2.26
YBX1-201ENST00000321358 ZNF692Q9BU19 519 aaPredicted RBP29.16■■■□□ 2.26
YBX1-201ENST00000321358 ACEP12821 1306 aa29.15■■■□□ 2.26
YBX1-201ENST00000321358 FOXO3O43524 673 aa29.14■■■□□ 2.25
YBX1-201ENST00000321358 PSME1Q06323 249 aa29.14■■■□□ 2.25
YBX1-201ENST00000321358 USP32Q8NFA0 1604 aa29.13■■■□□ 2.25
YBX1-201ENST00000321358 PANK3Q9H999 370 aa29.12■■■□□ 2.25
YBX1-201ENST00000321358 DDX10Q13206 875 aaKnown RBP29.11■■■□□ 2.25
YBX1-201ENST00000321358 NPHP3Q7Z494 1330 aa29.11■■■□□ 2.25
YBX1-201ENST00000321358 ANKRD36BQ8N2N9 1353 aa29.1■■■□□ 2.25
YBX1-201ENST00000321358 POLR3AO14802 1390 aaPredicted RBP29.1■■■□□ 2.25
YBX1-201ENST00000321358 ITSN1Q15811 1721 aa29.09■■■□□ 2.25
YBX1-201ENST00000321358 KTN1Q86UP2 1357 aaKnown RBP29.07■■■□□ 2.24
YBX1-201ENST00000321358 TOPAZ1Q8N9V7 1692 aa29.06■■■□□ 2.24
YBX1-201ENST00000321358 A0A1W2PP64 1363 aa29.06■■■□□ 2.24
YBX1-201ENST00000321358 KRT28Q7Z3Y7 464 aa29.05■■■□□ 2.24
YBX1-201ENST00000321358 CPSF1Q10570 1443 aaKnown RBP29.05■■■□□ 2.24
YBX1-201ENST00000321358 RGPD8O14715 1765 aaPredicted RBP29.04■■■□□ 2.24
YBX1-201ENST00000321358 HSPA1LP34931 641 aa29.04■■■□□ 2.24
YBX1-201ENST00000321358 KIF1AQ12756 1690 aa29.03■■■□□ 2.24
YBX1-201ENST00000321358 KNSTRNQ9Y448 316 aa29.03■■■□□ 2.24
YBX1-201ENST00000321358 DDX17Q92841 729 aaKnown RBP29.02■■■□□ 2.24
YBX1-201ENST00000321358 PAK3O75914 559 aaPredicted RBP29.01■■■□□ 2.23
YBX1-201ENST00000321358 XPCQ01831 940 aaPredicted RBP29.01■■■□□ 2.23
YBX1-201ENST00000321358 BRD4O60885 1362 aaPredicted RBP29.01■■■□□ 2.23
YBX1-201ENST00000321358 CD163L1Q9NR16 1453 aa29.01■■■□□ 2.23
YBX1-201ENST00000321358 USP6P35125 1406 aa29■■■□□ 2.23
YBX1-201ENST00000321358 CARD14Q9BXL6 1004 aa28.99■■■□□ 2.23
YBX1-201ENST00000321358 MYOM1P52179 1685 aa28.98■■■□□ 2.23
YBX1-201ENST00000321358 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.98■■■□□ 2.23
YBX1-201ENST00000321358 EDC4Q6P2E9 1401 aaKnown RBP28.97■■■□□ 2.23
YBX1-201ENST00000321358 ROBO1Q9Y6N7 1651 aa28.97■■■□□ 2.23
YBX1-201ENST00000321358 NSD3Q9BZ95 1437 aa28.96■■■□□ 2.23
YBX1-201ENST00000321358 SOS2Q07890 1332 aaPredicted RBP28.95■■■□□ 2.23
YBX1-201ENST00000321358 CGNL1Q0VF96 1302 aa28.95■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms