RNA–Protein interactions for RNA: ENST00000321110.1

RTL3-201, Transcript of retrotransposon Gag like 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RTL3, Length 2,648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3-201ENST00000321110 AMER1Q5JTC6 1135 aaPredicted RBP9.95□□□□□ -0.82
RTL3-201ENST00000321110 SNX21Q969T3 373 aa9.95□□□□□ -0.82
RTL3-201ENST00000321110 PDLIM2Q96JY6 352 aa9.95□□□□□ -0.82
RTL3-201ENST00000321110 STAC3Q96MF2 364 aa9.95□□□□□ -0.82
RTL3-201ENST00000321110 CHD1O14646 1710 aa9.95□□□□□ -0.82
RTL3-201ENST00000321110 CFDP1Q9UEE9 299 aaPredicted RBP9.95□□□□□ -0.82
RTL3-201ENST00000321110 PTMSP20962 102 aa9.94□□□□□ -0.82
RTL3-201ENST00000321110 RWDD1Q9H446 243 aaPredicted RBP9.94□□□□□ -0.82
RTL3-201ENST00000321110 FOXD4L1Q9NU39 408 aa9.94□□□□□ -0.82
RTL3-201ENST00000321110 SSFA2P28290 1259 aa9.94□□□□□ -0.82
RTL3-201ENST00000321110 TMF1P82094 1093 aa9.94□□□□□ -0.82
RTL3-201ENST00000321110 KLHL40Q2TBA0 621 aa9.94□□□□□ -0.82
RTL3-201ENST00000321110 PPP4R3BQ5MIZ7 849 aa9.94□□□□□ -0.82
RTL3-201ENST00000321110 SASS6Q6UVJ0 657 aa9.94□□□□□ -0.82
RTL3-201ENST00000321110 ZKSCAN5Q9Y2L8 839 aa9.94□□□□□ -0.82
RTL3-201ENST00000321110 ABCC2Q92887 1545 aa9.94□□□□□ -0.82
RTL3-201ENST00000321110 WDR7Q9Y4E6 1490 aa9.93□□□□□ -0.82
RTL3-201ENST00000321110 FAM135AQ9P2D6 1515 aa9.93□□□□□ -0.82
RTL3-201ENST00000321110 HSP90AB1P08238 724 aaKnown RBP9.93□□□□□ -0.82
RTL3-201ENST00000321110 KNSTRNQ9Y448 316 aa9.93□□□□□ -0.82
RTL3-201ENST00000321110 DDX49Q9Y6V7 483 aaKnown RBP9.93□□□□□ -0.82
RTL3-201ENST00000321110 PLXNC1O60486 1568 aa9.93□□□□□ -0.82
RTL3-201ENST00000321110 PLB1Q6P1J6 1458 aa9.93□□□□□ -0.82
RTL3-201ENST00000321110 PRDM15P57071 1507 aaPredicted RBP9.93□□□□□ -0.82
RTL3-201ENST00000321110 CD2BP2O95400 341 aaKnown RBP9.93□□□□□ -0.82
RTL3-201ENST00000321110 RBM25P49756 843 aaKnown RBP9.93□□□□□ -0.82
RTL3-201ENST00000321110 RARSP54136 660 aaKnown RBP9.93□□□□□ -0.82
RTL3-201ENST00000321110 JARID2Q92833 1246 aaPredicted RBP9.93□□□□□ -0.82
RTL3-201ENST00000321110 RBSNQ9H1K0 784 aa9.93□□□□□ -0.82
RTL3-201ENST00000321110 PIK3C2GO75747 1445 aa9.93□□□□□ -0.82
RTL3-201ENST00000321110 ZNF445P59923 1031 aa9.92□□□□□ -0.82
RTL3-201ENST00000321110 CSPP1Q1MSJ5 1256 aa9.92□□□□□ -0.82
RTL3-201ENST00000321110 CDC42BPAQ5VT25 1732 aa9.92□□□□□ -0.82
RTL3-201ENST00000321110 ZNF777Q9ULD5 760 aaPredicted RBP9.91□□□□□ -0.82
RTL3-201ENST00000321110 RGL3Q3MIN7 710 aa9.91□□□□□ -0.82
RTL3-201ENST00000321110 CLEC17AQ6ZS10 378 aa9.91□□□□□ -0.82
RTL3-201ENST00000321110 KIF2CQ99661 725 aa9.91□□□□□ -0.82
RTL3-201ENST00000321110 BCL2L13Q9BXK5 485 aa9.91□□□□□ -0.82
RTL3-201ENST00000321110 ABCC10Q5T3U5 1492 aa9.9□□□□□ -0.82
RTL3-201ENST00000321110 BAG4O95429 457 aaKnown RBP9.9□□□□□ -0.82
RTL3-201ENST00000321110 ZSCAN23Q3MJ62 389 aa9.9□□□□□ -0.82
RTL3-201ENST00000321110 ZNF710Q8N1W2 664 aa9.9□□□□□ -0.82
RTL3-201ENST00000321110 TSC1Q92574 1164 aa9.9□□□□□ -0.82
RTL3-201ENST00000321110 CBX1P83916 185 aa9.9□□□□□ -0.82
RTL3-201ENST00000321110 WWC1Q8IX03 1113 aa9.9□□□□□ -0.82
RTL3-201ENST00000321110 GTPBP4Q9BZE4 634 aaKnown RBP9.9□□□□□ -0.82
RTL3-201ENST00000321110 NAP1L2Q9ULW6 460 aaPredicted RBP9.9□□□□□ -0.82
RTL3-201ENST00000321110 KIF20AO95235 890 aa9.89□□□□□ -0.83
RTL3-201ENST00000321110 CAVIN1Q6NZI2 390 aaKnown RBP9.89□□□□□ -0.83
RTL3-201ENST00000321110 SHANK2Q9UPX8 1470 aa9.89□□□□□ -0.83
RTL3-201ENST00000321110 GOLGA6L22H0YM25 854 aa9.89□□□□□ -0.83
RTL3-201ENST00000321110 MCM5P33992 734 aa9.89□□□□□ -0.83
RTL3-201ENST00000321110 PRIM1P49642 420 aaKnown RBP9.89□□□□□ -0.83
RTL3-201ENST00000321110 GAS2L2Q8NHY3 880 aa9.89□□□□□ -0.83
RTL3-201ENST00000321110 TMEM51Q9NW97 253 aa9.89□□□□□ -0.83
RTL3-201ENST00000321110 ARHGAP31Q2M1Z3 1444 aa9.89□□□□□ -0.83
RTL3-201ENST00000321110 LAMC1P11047 1609 aa9.89□□□□□ -0.83
RTL3-201ENST00000321110 NCLP19338 710 aaKnown RBP9.88□□□□□ -0.83
RTL3-201ENST00000321110 ATP2B3Q16720 1220 aa9.88□□□□□ -0.83
RTL3-201ENST00000321110 CHMP4BQ9H444 224 aaKnown RBP9.88□□□□□ -0.83
RTL3-201ENST00000321110 A2MP01023 1474 aa9.88□□□□□ -0.83
RTL3-201ENST00000321110 PTPRGP23470 1445 aa9.88□□□□□ -0.83
RTL3-201ENST00000321110 TNNT2P45379 298 aaPredicted RBP9.88□□□□□ -0.83
RTL3-201ENST00000321110 MYRIPQ8NFW9 859 aa9.88□□□□□ -0.83
RTL3-201ENST00000321110 MVPQ14764 893 aaKnown RBP9.87□□□□□ -0.83
RTL3-201ENST00000321110 C9orf84Q5VXU9 1444 aa9.87□□□□□ -0.83
RTL3-201ENST00000321110 CARMIL2Q6F5E8 1435 aa9.87□□□□□ -0.83
RTL3-201ENST00000321110 ASXL1Q8IXJ9 1541 aa9.87□□□□□ -0.83
RTL3-201ENST00000321110 K7ELQ4 463 aaPredicted RBP9.87□□□□□ -0.83
RTL3-201ENST00000321110 LETM1O95202 739 aaPredicted RBP9.87□□□□□ -0.83
RTL3-201ENST00000321110 TAF7LQ5H9L4 462 aa9.87□□□□□ -0.83
RTL3-201ENST00000321110 RBM42Q9BTD8 480 aaKnown RBP9.87□□□□□ -0.83
RTL3-201ENST00000321110 NUP160Q12769 1436 aa9.86□□□□□ -0.83
RTL3-201ENST00000321110 ZBTB7CA1YPR0 619 aa9.86□□□□□ -0.83
RTL3-201ENST00000321110 MCTP1Q6DN14 999 aa9.86□□□□□ -0.83
RTL3-201ENST00000321110 NGEFQ8N5V2 710 aa9.86□□□□□ -0.83
RTL3-201ENST00000321110 LMBRD1Q9NUN5 540 aa9.86□□□□□ -0.83
RTL3-201ENST00000321110 CCDC39Q9UFE4 941 aa9.86□□□□□ -0.83
RTL3-201ENST00000321110 ABCA8O94911 1581 aa9.86□□□□□ -0.83
RTL3-201ENST00000321110 SHROOM2Q13796 1616 aa9.86□□□□□ -0.83
RTL3-201ENST00000321110 RBM27Q9P2N5 1060 aaKnown RBP9.86□□□□□ -0.83
RTL3-201ENST00000321110 FAM177BA6PVY3 158 aa9.85□□□□□ -0.83
RTL3-201ENST00000321110 HDAC1Q13547 482 aaPredicted RBP9.85□□□□□ -0.83
RTL3-201ENST00000321110 NEUROD2Q15784 382 aa9.85□□□□□ -0.83
RTL3-201ENST00000321110 RRP7AQ9Y3A4 280 aaKnown RBP9.85□□□□□ -0.83
RTL3-201ENST00000321110 NPC1L1Q9UHC9 1359 aa9.84□□□□□ -0.83
RTL3-201ENST00000321110 GPT2Q8TD30 523 aa9.84□□□□□ -0.83
RTL3-201ENST00000321110 JPH4Q96JJ6 628 aa9.84□□□□□ -0.83
RTL3-201ENST00000321110 ARHGEF5Q12774 1597 aa9.83□□□□□ -0.84
RTL3-201ENST00000321110 PLA2R1Q13018 1463 aa9.83□□□□□ -0.84
RTL3-201ENST00000321110 PLEKHD1A6NEE1 506 aa9.83□□□□□ -0.84
RTL3-201ENST00000321110 GTF2F1P35269 517 aaKnown RBP eCLIP9.83□□□□□ -0.84
RTL3-201ENST00000321110 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.83□□□□□ -0.84
RTL3-201ENST00000321110 ATP10BO94823 1461 aa9.83□□□□□ -0.84
RTL3-201ENST00000321110 VGLL3A8MV65 326 aa9.83□□□□□ -0.84
RTL3-201ENST00000321110 IGSF3O75054 1194 aa9.83□□□□□ -0.84
RTL3-201ENST00000321110 KIAA2012Q0VF49 1180 aa9.83□□□□□ -0.84
RTL3-201ENST00000321110 PKP1Q13835 747 aa9.83□□□□□ -0.84
RTL3-201ENST00000321110 IPO4Q8TEX9 1081 aaKnown RBP9.83□□□□□ -0.84
RTL3-201ENST00000321110 SYNMO15061 1565 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms