RNA–Protein interactions for RNA: ENST00000319518.12

CPNE7-202, Transcript of copine 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE7, Length 2,409 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7-202ENST00000319518 NEXMIFQ5QGS0 1516 aa27.15■■□□□ 1.94
CPNE7-202ENST00000319518 SPINK5Q9NQ38 1064 aaPredicted RBP27.15■■□□□ 1.94
CPNE7-202ENST00000319518 TRMT2AQ8IZ69 625 aaKnown RBP27.14■■□□□ 1.94
CPNE7-202ENST00000319518 LAS1LQ9Y4W2 734 aaKnown RBP27.14■■□□□ 1.93
CPNE7-202ENST00000319518 MYO3AQ8NEV4 1616 aa27.13■■□□□ 1.93
CPNE7-202ENST00000319518 CARD14Q9BXL6 1004 aa27.12■■□□□ 1.93
CPNE7-202ENST00000319518 MYO5BQ9ULV0 1848 aa27.11■■□□□ 1.93
CPNE7-202ENST00000319518 VGFO15240 615 aaPredicted RBP27.11■■□□□ 1.93
CPNE7-202ENST00000319518 PREX1Q8TCU6 1659 aa27.11■■□□□ 1.93
CPNE7-202ENST00000319518 MLECQ14165 292 aa27.1■■□□□ 1.93
CPNE7-202ENST00000319518 CENPQQ7L2Z9 268 aaPredicted RBP27.1■■□□□ 1.93
CPNE7-202ENST00000319518 SLC52A1Q9NWF4 448 aa27.09■■□□□ 1.93
CPNE7-202ENST00000319518 APAF1O14727 1248 aa27.08■■□□□ 1.93
CPNE7-202ENST00000319518 QRICH2Q9H0J4 1663 aa27.08■■□□□ 1.93
CPNE7-202ENST00000319518 SBNO2Q9Y2G9 1366 aa27.07■■□□□ 1.92
CPNE7-202ENST00000319518 SLC24A1O60721 1099 aa27.05■■□□□ 1.92
CPNE7-202ENST00000319518 SAFB2Q14151 953 aaKnown RBP eCLIP27.05■■□□□ 1.92
CPNE7-202ENST00000319518 DMRT2Q9Y5R5 561 aa27.05■■□□□ 1.92
CPNE7-202ENST00000319518 SLC12A5Q9H2X9 1139 aa27.04■■□□□ 1.92
CPNE7-202ENST00000319518 STK26Q9P289 416 aa27.04■■□□□ 1.92
CPNE7-202ENST00000319518 TMEM131LA2VDJ0 1609 aa27.03■■□□□ 1.92
CPNE7-202ENST00000319518 NEFMP07197 916 aa27.02■■□□□ 1.92
CPNE7-202ENST00000319518 NKTRP30414 1462 aaKnown RBP27.02■■□□□ 1.92
CPNE7-202ENST00000319518 C8orf34Q49A92 452 aa27.02■■□□□ 1.92
CPNE7-202ENST00000319518 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.01■■□□□ 1.92
CPNE7-202ENST00000319518 BCAR3O75815 825 aa27.01■■□□□ 1.91
CPNE7-202ENST00000319518 KIF13AQ9H1H9 1805 aa27.01■■□□□ 1.91
CPNE7-202ENST00000319518 CLTCQ00610 1675 aaKnown RBP26.99■■□□□ 1.91
CPNE7-202ENST00000319518 DDRGK1Q96HY6 314 aa26.98■■□□□ 1.91
CPNE7-202ENST00000319518 ARHGEF28Q8N1W1 1705 aaKnown RBP26.97■■□□□ 1.91
CPNE7-202ENST00000319518 USP35Q9P2H5 1018 aa26.97■■□□□ 1.91
CPNE7-202ENST00000319518 STAG3Q9UJ98 1225 aa26.96■■□□□ 1.91
CPNE7-202ENST00000319518 FAM161AQ3B820 660 aa26.96■■□□□ 1.91
CPNE7-202ENST00000319518 E9PSI1 815 aa26.95■■□□□ 1.9
CPNE7-202ENST00000319518 NSD3Q9BZ95 1437 aa26.95■■□□□ 1.9
CPNE7-202ENST00000319518 AGLP35573 1532 aa26.95■■□□□ 1.9
CPNE7-202ENST00000319518 REREQ9P2R6 1566 aa26.94■■□□□ 1.9
CPNE7-202ENST00000319518 PPM1GO15355 546 aaPredicted RBP26.94■■□□□ 1.9
CPNE7-202ENST00000319518 SLC4A3P48751 1232 aa26.94■■□□□ 1.9
CPNE7-202ENST00000319518 ZFYVE9O95405 1425 aa26.93■■□□□ 1.9
CPNE7-202ENST00000319518 CABP2Q9NPB3 220 aa26.93■■□□□ 1.9
CPNE7-202ENST00000319518 TULP4Q9NRJ4 1543 aa26.93■■□□□ 1.9
CPNE7-202ENST00000319518 TNNT2P45379 298 aaPredicted RBP26.92■■□□□ 1.9
CPNE7-202ENST00000319518 RGS3P49796 1198 aa26.91■■□□□ 1.9
CPNE7-202ENST00000319518 POLR3AO14802 1390 aaPredicted RBP26.9■■□□□ 1.9
CPNE7-202ENST00000319518 EVC2Q86UK5 1308 aa26.9■■□□□ 1.9
CPNE7-202ENST00000319518 IGHDP01880 384 aa26.88■■□□□ 1.89
CPNE7-202ENST00000319518 WWC1Q8IX03 1113 aa26.88■■□□□ 1.89
CPNE7-202ENST00000319518 SHPRHQ149N8 1683 aa26.87■■□□□ 1.89
CPNE7-202ENST00000319518 ARHGEF40Q8TER5 1519 aa26.87■■□□□ 1.89
CPNE7-202ENST00000319518 PRAM1Q96QH2 718 aa26.86■■□□□ 1.89
CPNE7-202ENST00000319518 MINK1Q8N4C8 1332 aaPredicted RBP26.85■■□□□ 1.89
CPNE7-202ENST00000319518 PPP6R1Q9UPN7 881 aa26.85■■□□□ 1.89
CPNE7-202ENST00000319518 NGEFQ8N5V2 710 aa26.85■■□□□ 1.89
CPNE7-202ENST00000319518 MORC1Q86VD1 984 aa26.84■■□□□ 1.89
CPNE7-202ENST00000319518 YTHDC2Q9H6S0 1430 aaKnown RBP26.83■■□□□ 1.89
CPNE7-202ENST00000319518 PTPRMP28827 1452 aa26.83■■□□□ 1.89
CPNE7-202ENST00000319518 SRPK2P78362 688 aaKnown RBP26.82■■□□□ 1.88
CPNE7-202ENST00000319518 A2ML1A8K2U0 1454 aa26.82■■□□□ 1.88
CPNE7-202ENST00000319518 ALKQ9UM73 1620 aa26.82■■□□□ 1.88
CPNE7-202ENST00000319518 SPATA31D1Q6ZQQ2 1576 aa26.81■■□□□ 1.88
CPNE7-202ENST00000319518 POGKQ9P215 609 aa26.81■■□□□ 1.88
CPNE7-202ENST00000319518 PDE3AQ14432 1141 aa26.8■■□□□ 1.88
CPNE7-202ENST00000319518 NFKBIBQ15653 356 aa26.8■■□□□ 1.88
CPNE7-202ENST00000319518 PANK1Q8TE04 598 aa26.8■■□□□ 1.88
CPNE7-202ENST00000319518 IQSEC2Q5JU85 1478 aa26.78■■□□□ 1.88
CPNE7-202ENST00000319518 CGNL1Q0VF96 1302 aa26.78■■□□□ 1.88
CPNE7-202ENST00000319518 ESF1Q9H501 851 aaKnown RBP26.78■■□□□ 1.88
CPNE7-202ENST00000319518 COG6Q9Y2V7 657 aa26.78■■□□□ 1.88
CPNE7-202ENST00000319518 RRP7AQ9Y3A4 280 aaKnown RBP26.78■■□□□ 1.88
CPNE7-202ENST00000319518 ZMYM3Q14202 1370 aa26.78■■□□□ 1.88
CPNE7-202ENST00000319518 RIMS2Q9UQ26 1411 aa26.77■■□□□ 1.88
CPNE7-202ENST00000319518 NEUROD2Q15784 382 aa26.76■■□□□ 1.87
CPNE7-202ENST00000319518 ANKRD36BQ8N2N9 1353 aa26.76■■□□□ 1.87
CPNE7-202ENST00000319518 CLUAP1Q96AJ1 413 aa26.76■■□□□ 1.87
CPNE7-202ENST00000319518 PHF23Q9BUL5 403 aaPredicted RBP26.76■■□□□ 1.87
CPNE7-202ENST00000319518 USP19O94966 1318 aa26.75■■□□□ 1.87
CPNE7-202ENST00000319518 IL27Q8NEV9 243 aa26.75■■□□□ 1.87
CPNE7-202ENST00000319518 NINLQ9Y2I6 1382 aa26.74■■□□□ 1.87
CPNE7-202ENST00000319518 TCP11L2Q8N4U5 519 aa26.74■■□□□ 1.87
CPNE7-202ENST00000319518 PUS7Q96PZ0 661 aaKnown RBP26.74■■□□□ 1.87
CPNE7-202ENST00000319518 VIRMAQ69YN4 1812 aaKnown RBP26.73■■□□□ 1.87
CPNE7-202ENST00000319518 WAPLQ7Z5K2 1190 aa26.73■■□□□ 1.87
CPNE7-202ENST00000319518 RUNDC1Q96C34 613 aa26.73■■□□□ 1.87
CPNE7-202ENST00000319518 A0A1W2PP64 1363 aa26.73■■□□□ 1.87
CPNE7-202ENST00000319518 RARSP54136 660 aaKnown RBP26.72■■□□□ 1.87
CPNE7-202ENST00000319518 MTHFSP49914 203 aa26.71■■□□□ 1.87
CPNE7-202ENST00000319518 TNNQ9UQP3 1299 aa26.71■■□□□ 1.87
CPNE7-202ENST00000319518 DAXXQ9UER7 740 aaPredicted RBP26.7■■□□□ 1.87
CPNE7-202ENST00000319518 FRAT1Q92837 279 aaPredicted RBP26.7■■□□□ 1.86
CPNE7-202ENST00000319518 USP32Q8NFA0 1604 aa26.69■■□□□ 1.86
CPNE7-202ENST00000319518 CANXP27824 592 aaKnown RBP26.69■■□□□ 1.86
CPNE7-202ENST00000319518 SEC24BO95487 1268 aa26.69■■□□□ 1.86
CPNE7-202ENST00000319518 RLBP1P12271 317 aa26.69■■□□□ 1.86
CPNE7-202ENST00000319518 CDK19Q9BWU1 502 aa26.68■■□□□ 1.86
CPNE7-202ENST00000319518 GGNBP2Q9H3C7 697 aa26.67■■□□□ 1.86
CPNE7-202ENST00000319518 GSE1Q14687 1217 aa26.65■■□□□ 1.86
CPNE7-202ENST00000319518 PCDHB15Q9Y5E8 787 aa26.65■■□□□ 1.86
CPNE7-202ENST00000319518 WDR63Q8IWG1 891 aa26.64■■□□□ 1.86
CPNE7-202ENST00000319518 SETD1AO15047 1707 aaKnown RBP26.64■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms