RNA–Protein interactions for RNA: ENST00000319406.8

LCLAT1-202, Transcript of lysocardiolipin acyltransferase 1, humanhuman

TSL 2 BASIC

Gene LCLAT1, Length 2,774 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCLAT1-202ENST00000319406 MS4A1P11836 297 aa13.3□□□□□ -0.28
LCLAT1-202ENST00000319406 ZFYVE9O95405 1425 aa13.28□□□□□ -0.28
LCLAT1-202ENST00000319406 DUSP27Q5VZP5 1158 aa13.27□□□□□ -0.28
LCLAT1-202ENST00000319406 TULP4Q9NRJ4 1543 aa13.27□□□□□ -0.28
LCLAT1-202ENST00000319406 CHGAP10645 457 aaKnown RBP13.27□□□□□ -0.29
LCLAT1-202ENST00000319406 WDR43Q15061 677 aaKnown RBP eCLIP13.27□□□□□ -0.29
LCLAT1-202ENST00000319406 PREX1Q8TCU6 1659 aa13.27□□□□□ -0.29
LCLAT1-202ENST00000319406 TRAK1Q9UPV9 953 aa13.26□□□□□ -0.29
LCLAT1-202ENST00000319406 POLR3AO14802 1390 aaPredicted RBP13.26□□□□□ -0.29
LCLAT1-202ENST00000319406 SHPRHQ149N8 1683 aa13.26□□□□□ -0.29
LCLAT1-202ENST00000319406 TMEM131LA2VDJ0 1609 aa13.26□□□□□ -0.29
LCLAT1-202ENST00000319406 TRMT2AQ8IZ69 625 aaKnown RBP13.26□□□□□ -0.29
LCLAT1-202ENST00000319406 PUS7Q96PZ0 661 aaKnown RBP13.25□□□□□ -0.29
LCLAT1-202ENST00000319406 RSPH6AQ9H0K4 717 aa13.25□□□□□ -0.29
LCLAT1-202ENST00000319406 NSD3Q9BZ95 1437 aa13.25□□□□□ -0.29
LCLAT1-202ENST00000319406 TMEM132EQ6IEE7 984 aa13.25□□□□□ -0.29
LCLAT1-202ENST00000319406 MYO5BQ9ULV0 1848 aa13.24□□□□□ -0.29
LCLAT1-202ENST00000319406 DIP2BQ9P265 1576 aa13.24□□□□□ -0.29
LCLAT1-202ENST00000319406 IDI1Q13907 227 aa13.24□□□□□ -0.29
LCLAT1-202ENST00000319406 DDRGK1Q96HY6 314 aa13.23□□□□□ -0.29
LCLAT1-202ENST00000319406 REREQ9P2R6 1566 aa13.23□□□□□ -0.29
LCLAT1-202ENST00000319406 FAM43AQ8N2R8 423 aa13.23□□□□□ -0.29
LCLAT1-202ENST00000319406 VGFO15240 615 aaPredicted RBP13.22□□□□□ -0.29
LCLAT1-202ENST00000319406 SLFN5Q08AF3 891 aa13.22□□□□□ -0.29
LCLAT1-202ENST00000319406 PLIN1O60240 522 aa13.22□□□□□ -0.29
LCLAT1-202ENST00000319406 SLC52A1Q9NWF4 448 aa13.22□□□□□ -0.29
LCLAT1-202ENST00000319406 GOLGA2Q08379 1002 aa13.21□□□□□ -0.29
LCLAT1-202ENST00000319406 PKNOX2Q96KN3 472 aa13.21□□□□□ -0.29
LCLAT1-202ENST00000319406 SLC12A5Q9H2X9 1139 aa13.21□□□□□ -0.29
LCLAT1-202ENST00000319406 FRAT2O75474 233 aaPredicted RBP13.21□□□□□ -0.29
LCLAT1-202ENST00000319406 RIMBP3CA6NJZ7 1639 aa13.21□□□□□ -0.29
LCLAT1-202ENST00000319406 RIMBP3BA6NNM3 1639 aa13.21□□□□□ -0.29
LCLAT1-202ENST00000319406 RIMBP3Q9UFD9 1639 aa13.21□□□□□ -0.29
LCLAT1-202ENST00000319406 SPINK5Q9NQ38 1064 aaPredicted RBP13.2□□□□□ -0.3
LCLAT1-202ENST00000319406 IQSEC2Q5JU85 1478 aa13.2□□□□□ -0.3
LCLAT1-202ENST00000319406 CCDC146Q8IYE0 955 aa13.2□□□□□ -0.3
LCLAT1-202ENST00000319406 CRBNQ96SW2 442 aa13.2□□□□□ -0.3
LCLAT1-202ENST00000319406 AGLP35573 1532 aa13.2□□□□□ -0.3
LCLAT1-202ENST00000319406 ANKRD36BQ8N2N9 1353 aa13.19□□□□□ -0.3
LCLAT1-202ENST00000319406 PTPRMP28827 1452 aa13.19□□□□□ -0.3
LCLAT1-202ENST00000319406 APAF1O14727 1248 aa13.19□□□□□ -0.3
LCLAT1-202ENST00000319406 C20orf194Q5TEA3 1177 aa13.19□□□□□ -0.3
LCLAT1-202ENST00000319406 NUTM2DQ5VT03 806 aaPredicted RBP13.18□□□□□ -0.3
LCLAT1-202ENST00000319406 NGEFQ8N5V2 710 aa13.18□□□□□ -0.3
LCLAT1-202ENST00000319406 CLTCQ00610 1675 aaKnown RBP13.18□□□□□ -0.3
LCLAT1-202ENST00000319406 NKTRP30414 1462 aaKnown RBP13.17□□□□□ -0.3
LCLAT1-202ENST00000319406 EVC2Q86UK5 1308 aa13.17□□□□□ -0.3
LCLAT1-202ENST00000319406 CYB5RLQ6IPT4 315 aa13.17□□□□□ -0.3
LCLAT1-202ENST00000319406 NSD2O96028 1365 aa13.16□□□□□ -0.3
LCLAT1-202ENST00000319406 DMRT2Q9Y5R5 561 aa13.16□□□□□ -0.3
LCLAT1-202ENST00000319406 PHF23Q9BUL5 403 aaPredicted RBP13.15□□□□□ -0.3
LCLAT1-202ENST00000319406 KDM2BQ8NHM5 1336 aa13.15□□□□□ -0.3
LCLAT1-202ENST00000319406 MORC1Q86VD1 984 aa13.15□□□□□ -0.3
LCLAT1-202ENST00000319406 RRAGDQ9NQL2 400 aaPredicted RBP13.15□□□□□ -0.3
LCLAT1-202ENST00000319406 CGNL1Q0VF96 1302 aa13.15□□□□□ -0.3
LCLAT1-202ENST00000319406 NINLQ9Y2I6 1382 aa13.15□□□□□ -0.3
LCLAT1-202ENST00000319406 SPATA31D1Q6ZQQ2 1576 aa13.14□□□□□ -0.31
LCLAT1-202ENST00000319406 E9PSI1 815 aa13.14□□□□□ -0.31
LCLAT1-202ENST00000319406 ALKQ9UM73 1620 aa13.14□□□□□ -0.31
LCLAT1-202ENST00000319406 CD163L1Q9NR16 1453 aa13.14□□□□□ -0.31
LCLAT1-202ENST00000319406 ABCC11Q96J66 1382 aa13.13□□□□□ -0.31
LCLAT1-202ENST00000319406 YTHDC2Q9H6S0 1430 aaKnown RBP13.13□□□□□ -0.31
LCLAT1-202ENST00000319406 NLRP1Q9C000 1473 aa13.13□□□□□ -0.31
LCLAT1-202ENST00000319406 FAM69CQ0P6D2 419 aa13.13□□□□□ -0.31
LCLAT1-202ENST00000319406 FBXO31Q5XUX0 539 aaPredicted RBP13.13□□□□□ -0.31
LCLAT1-202ENST00000319406 SETD1AO15047 1707 aaKnown RBP13.13□□□□□ -0.31
LCLAT1-202ENST00000319406 A0A1W2PP64 1363 aa13.13□□□□□ -0.31
LCLAT1-202ENST00000319406 WWC1Q8IX03 1113 aa13.12□□□□□ -0.31
LCLAT1-202ENST00000319406 CABP2Q9NPB3 220 aa13.12□□□□□ -0.31
LCLAT1-202ENST00000319406 DAXXQ9UER7 740 aaPredicted RBP13.12□□□□□ -0.31
LCLAT1-202ENST00000319406 ADGRB2O60241 1585 aa13.12□□□□□ -0.31
LCLAT1-202ENST00000319406 PPP6R1Q9UPN7 881 aa13.11□□□□□ -0.31
LCLAT1-202ENST00000319406 ANKRD26Q9UPS8 1709 aa13.11□□□□□ -0.31
LCLAT1-202ENST00000319406 ARHGEF40Q8TER5 1519 aa13.11□□□□□ -0.31
LCLAT1-202ENST00000319406 MED14O60244 1454 aa13.11□□□□□ -0.31
LCLAT1-202ENST00000319406 TSPOAP1O95153 1857 aa13.11□□□□□ -0.31
LCLAT1-202ENST00000319406 C8orf34Q49A92 452 aa13.11□□□□□ -0.31
LCLAT1-202ENST00000319406 COL3A1P02461 1466 aaPredicted RBP13.11□□□□□ -0.31
LCLAT1-202ENST00000319406 MTHFSP49914 203 aa13.1□□□□□ -0.31
LCLAT1-202ENST00000319406 A2ML1A8K2U0 1454 aa13.1□□□□□ -0.31
LCLAT1-202ENST00000319406 NCBP3Q53F19 620 aaKnown RBP13.1□□□□□ -0.31
LCLAT1-202ENST00000319406 DLC1Q96QB1 1528 aa13.1□□□□□ -0.31
LCLAT1-202ENST00000319406 RUNDC1Q96C34 613 aa13.09□□□□□ -0.31
LCLAT1-202ENST00000319406 ATAD2Q6PL18 1390 aa13.09□□□□□ -0.31
LCLAT1-202ENST00000319406 POGKQ9P215 609 aa13.09□□□□□ -0.31
LCLAT1-202ENST00000319406 TNNT2P45379 298 aaPredicted RBP13.09□□□□□ -0.31
LCLAT1-202ENST00000319406 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.09□□□□□ -0.31
LCLAT1-202ENST00000319406 CCDC27Q2M243 656 aa13.08□□□□□ -0.32
LCLAT1-202ENST00000319406 ZMYND15Q9H091 742 aa13.08□□□□□ -0.32
LCLAT1-202ENST00000319406 BCAR3O75815 825 aa13.08□□□□□ -0.32
LCLAT1-202ENST00000319406 NRXN3Q9Y4C0 1643 aa13.07□□□□□ -0.32
LCLAT1-202ENST00000319406 SAFB2Q14151 953 aaKnown RBP eCLIP13.07□□□□□ -0.32
LCLAT1-202ENST00000319406 FAM161AQ3B820 660 aa13.07□□□□□ -0.32
LCLAT1-202ENST00000319406 TCP11L2Q8N4U5 519 aa13.07□□□□□ -0.32
LCLAT1-202ENST00000319406 PRAM1Q96QH2 718 aa13.07□□□□□ -0.32
LCLAT1-202ENST00000319406 STK26Q9P289 416 aa13.07□□□□□ -0.32
LCLAT1-202ENST00000319406 CENPQQ7L2Z9 268 aaPredicted RBP13.06□□□□□ -0.32
LCLAT1-202ENST00000319406 VSIG10Q8N0Z9 540 aa13.06□□□□□ -0.32
LCLAT1-202ENST00000319406 WDR63Q8IWG1 891 aa13.05□□□□□ -0.32
LCLAT1-202ENST00000319406 KIF13AQ9H1H9 1805 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms