RNA–Protein interactions for RNA: ENST00000318438.6

SYCN-201, Transcript of syncollin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYCN, Length 573 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCN-201ENST00000318438 XPCQ01831 940 aaPredicted RBP20.45■□□□□ 0.86
SYCN-201ENST00000318438 FAM50AQ14320 339 aaKnown RBP20.45■□□□□ 0.86
SYCN-201ENST00000318438 UNC5CLQ8IV45 518 aa20.45■□□□□ 0.86
SYCN-201ENST00000318438 MARF1Q9Y4F3 1742 aaKnown RBP20.44■□□□□ 0.86
SYCN-201ENST00000318438 SEPT12Q8IYM1 358 aa20.44■□□□□ 0.86
SYCN-201ENST00000318438 ROBO2Q9HCK4 1378 aa20.44■□□□□ 0.86
SYCN-201ENST00000318438 BRWD3Q6RI45 1802 aa20.43■□□□□ 0.86
SYCN-201ENST00000318438 PXDNQ92626 1479 aa20.43■□□□□ 0.86
SYCN-201ENST00000318438 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.42■□□□□ 0.86
SYCN-201ENST00000318438 NPHP3Q7Z494 1330 aa20.42■□□□□ 0.86
SYCN-201ENST00000318438 SLIT2O94813 1529 aa20.42■□□□□ 0.86
SYCN-201ENST00000318438 ESCO1Q5FWF5 840 aa20.41■□□□□ 0.86
SYCN-201ENST00000318438 SPHKAPQ2M3C7 1700 aa20.41■□□□□ 0.86
SYCN-201ENST00000318438 APLP2Q06481 763 aa20.4■□□□□ 0.86
SYCN-201ENST00000318438 FOXO3O43524 673 aa20.39■□□□□ 0.85
SYCN-201ENST00000318438 NUP155O75694 1391 aa20.38■□□□□ 0.85
SYCN-201ENST00000318438 NEXMIFQ5QGS0 1516 aa20.37■□□□□ 0.85
SYCN-201ENST00000318438 BAG6P46379 1132 aa20.37■□□□□ 0.85
SYCN-201ENST00000318438 KRT27Q7Z3Y8 459 aa20.37■□□□□ 0.85
SYCN-201ENST00000318438 YY1P25490 414 aa20.36■□□□□ 0.85
SYCN-201ENST00000318438 R3HDM1Q15032 1099 aaKnown RBP20.35■□□□□ 0.85
SYCN-201ENST00000318438 CCDC9Q9Y3X0 531 aaKnown RBP20.33■□□□□ 0.85
SYCN-201ENST00000318438 EN1Q05925 392 aaPredicted RBP20.32■□□□□ 0.84
SYCN-201ENST00000318438 VPS72Q15906 364 aa20.32■□□□□ 0.84
SYCN-201ENST00000318438 HFM1A2PYH4 1435 aa20.31■□□□□ 0.84
SYCN-201ENST00000318438 ONECUT3O60422 494 aaPredicted RBP20.31■□□□□ 0.84
SYCN-201ENST00000318438 PRAG1Q86YV5 1406 aa20.3■□□□□ 0.84
SYCN-201ENST00000318438 NUTM2FA1L443 756 aa20.3■□□□□ 0.84
SYCN-201ENST00000318438 USP32Q8NFA0 1604 aa20.3■□□□□ 0.84
SYCN-201ENST00000318438 A0A0G2JS52 829 aa20.29■□□□□ 0.84
SYCN-201ENST00000318438 MYT1Q01538 1121 aa20.29■□□□□ 0.84
SYCN-201ENST00000318438 CDC42BPGQ6DT37 1551 aa20.29■□□□□ 0.84
SYCN-201ENST00000318438 SPATA31A3Q5VYP0 1347 aa20.28■□□□□ 0.84
SYCN-201ENST00000318438 LRPPRCP42704 1394 aaKnown RBP20.28■□□□□ 0.84
SYCN-201ENST00000318438 PLEKHG5O94827 1062 aa20.27■□□□□ 0.84
SYCN-201ENST00000318438 CLTCL1P53675 1640 aa20.27■□□□□ 0.83
SYCN-201ENST00000318438 HAP1P54257 671 aaPredicted RBP20.25■□□□□ 0.83
SYCN-201ENST00000318438 CABLES1Q8TDN4 633 aa20.25■□□□□ 0.83
SYCN-201ENST00000318438 ROCK1Q13464 1354 aa20.24■□□□□ 0.83
SYCN-201ENST00000318438 FAM182BQ5T319 152 aa20.24■□□□□ 0.83
SYCN-201ENST00000318438 NAIPQ13075 1403 aa20.23■□□□□ 0.83
SYCN-201ENST00000318438 FAM98CQ17RN3 349 aaKnown RBP20.23■□□□□ 0.83
SYCN-201ENST00000318438 PLCH1Q4KWH8 1693 aa20.22■□□□□ 0.83
SYCN-201ENST00000318438 VGFO15240 615 aaPredicted RBP20.22■□□□□ 0.83
SYCN-201ENST00000318438 EZH2Q15910 746 aaKnown RBP20.2■□□□□ 0.82
SYCN-201ENST00000318438 KRT28Q7Z3Y7 464 aa20.2■□□□□ 0.82
SYCN-201ENST00000318438 CCDC144AA2RUR9 1427 aa20.19■□□□□ 0.82
SYCN-201ENST00000318438 NWD2Q9ULI1 1742 aa20.19■□□□□ 0.82
SYCN-201ENST00000318438 RGPD1P0DJD0 1748 aa20.19■□□□□ 0.82
SYCN-201ENST00000318438 WAPLQ7Z5K2 1190 aa20.18■□□□□ 0.82
SYCN-201ENST00000318438 DISP2A7MBM2 1401 aa20.17■□□□□ 0.82
SYCN-201ENST00000318438 TNS3Q68CZ2 1445 aa20.17■□□□□ 0.82
SYCN-201ENST00000318438 FAM83GA6ND36 823 aa20.16■□□□□ 0.82
SYCN-201ENST00000318438 KIF1BO60333 1816 aa20.14■□□□□ 0.81
SYCN-201ENST00000318438 ITGAEP38570 1179 aa20.14■□□□□ 0.81
SYCN-201ENST00000318438 STK26Q9P289 416 aa20.14■□□□□ 0.81
SYCN-201ENST00000318438 TNS1Q9HBL0 1735 aaKnown RBP20.13■□□□□ 0.81
SYCN-201ENST00000318438 LMOD2Q6P5Q4 547 aa20.13■□□□□ 0.81
SYCN-201ENST00000318438 KIF1AQ12756 1690 aa20.13■□□□□ 0.81
SYCN-201ENST00000318438 PLEKHH1Q9ULM0 1364 aa20.12■□□□□ 0.81
SYCN-201ENST00000318438 CAMKK2Q96RR4 588 aa20.12■□□□□ 0.81
SYCN-201ENST00000318438 ABCA3Q99758 1704 aa20.11■□□□□ 0.81
SYCN-201ENST00000318438 BTG4Q9NY30 223 aa20.11■□□□□ 0.81
SYCN-201ENST00000318438 NRAPQ86VF7 1730 aa20.1■□□□□ 0.81
SYCN-201ENST00000318438 FMN2Q9NZ56 1722 aa20.1■□□□□ 0.81
SYCN-201ENST00000318438 RPGRIP1LQ68CZ1 1315 aa20.09■□□□□ 0.81
SYCN-201ENST00000318438 TRIM37O94972 964 aa20.09■□□□□ 0.81
SYCN-201ENST00000318438 PSME1Q06323 249 aa20.09■□□□□ 0.81
SYCN-201ENST00000318438 PPP1R1BQ9UD71 204 aaPredicted RBP20.08■□□□□ 0.81
SYCN-201ENST00000318438 PHF8Q9UPP1 1060 aa20.08■□□□□ 0.81
SYCN-201ENST00000318438 TECPR2O15040 1411 aa20.08■□□□□ 0.8
SYCN-201ENST00000318438 ADGRB2O60241 1585 aa20.07■□□□□ 0.8
SYCN-201ENST00000318438 SBNO1A3KN83 1393 aa20.07■□□□□ 0.8
SYCN-201ENST00000318438 ARHGEF10O15013 1369 aa20.07■□□□□ 0.8
SYCN-201ENST00000318438 DCAF8L1A6NGE4 600 aa20.06■□□□□ 0.8
SYCN-201ENST00000318438 SPATA31A5Q5VU36 1347 aa20.05■□□□□ 0.8
SYCN-201ENST00000318438 SPATA31A7Q8IWB4 1347 aa20.05■□□□□ 0.8
SYCN-201ENST00000318438 APBA3O96018 575 aa20.05■□□□□ 0.8
SYCN-201ENST00000318438 PPLO60437 1756 aa20.05■□□□□ 0.8
SYCN-201ENST00000318438 THSD7AQ9UPZ6 1657 aa20.04■□□□□ 0.8
SYCN-201ENST00000318438 UTRNP46939 3433 aa20.04■□□□□ 0.8
SYCN-201ENST00000318438 ADGRF5Q8IZF2 1346 aa20.03■□□□□ 0.8
SYCN-201ENST00000318438 IFFO2Q5TF58 517 aa20.03■□□□□ 0.8
SYCN-201ENST00000318438 TMEM132EQ6IEE7 984 aa20.03■□□□□ 0.8
SYCN-201ENST00000318438 SENP3-EIF4A1A0A087X0R7 540 aa20.02■□□□□ 0.8
SYCN-201ENST00000318438 SPON1Q9HCB6 807 aa20.02■□□□□ 0.8
SYCN-201ENST00000318438 PARD3Q8TEW0 1356 aa20.02■□□□□ 0.8
SYCN-201ENST00000318438 NRXN1Q9ULB1 1477 aa20.02■□□□□ 0.8
SYCN-201ENST00000318438 ABCC11Q96J66 1382 aa20.01■□□□□ 0.79
SYCN-201ENST00000318438 NINLQ9Y2I6 1382 aa20.01■□□□□ 0.79
SYCN-201ENST00000318438 FAM196AQ6ZSG2 479 aa20.01■□□□□ 0.79
SYCN-201ENST00000318438 ZNF784Q8NCA9 323 aaPredicted RBP20.01■□□□□ 0.79
SYCN-201ENST00000318438 CAMTA1Q9Y6Y1 1673 aa20■□□□□ 0.79
SYCN-201ENST00000318438 RGPD8O14715 1765 aaPredicted RBP19.99■□□□□ 0.79
SYCN-201ENST00000318438 COL14A1Q05707 1796 aaKnown RBP19.99■□□□□ 0.79
SYCN-201ENST00000318438 KCNQ2O43526 872 aa19.99■□□□□ 0.79
SYCN-201ENST00000318438 NBPF8Q3BBV2 869 aa19.99■□□□□ 0.79
SYCN-201ENST00000318438 NBPF14Q5TI25 921 aa19.99■□□□□ 0.79
SYCN-201ENST00000318438 RREB1Q92766 1687 aa19.99■□□□□ 0.79
SYCN-201ENST00000318438 NUP188Q5SRE5 1749 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms