RNA–Protein interactions for RNA: ENST00000318129.5

GINS3-201, Transcript of GINS complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GINS3, Length 2,274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-201ENST00000318129 FAM135BQ49AJ0 1406 aa13.89□□□□□ -0.19
GINS3-201ENST00000318129 QRICH2Q9H0J4 1663 aa13.89□□□□□ -0.19
GINS3-201ENST00000318129 PRAM1Q96QH2 718 aa13.88□□□□□ -0.19
GINS3-201ENST00000318129 NCKAP5LQ9HCH0 1330 aa13.88□□□□□ -0.19
GINS3-201ENST00000318129 DISP3Q9P2K9 1392 aa13.88□□□□□ -0.19
GINS3-201ENST00000318129 PUS7Q96PZ0 661 aaKnown RBP13.87□□□□□ -0.19
GINS3-201ENST00000318129 POLR3GLQ9BT43 218 aa13.87□□□□□ -0.19
GINS3-201ENST00000318129 LMTK3Q96Q04 1460 aa13.87□□□□□ -0.19
GINS3-201ENST00000318129 CPS1P31327 1500 aa13.86□□□□□ -0.19
GINS3-201ENST00000318129 EVC2Q86UK5 1308 aa13.86□□□□□ -0.19
GINS3-201ENST00000318129 AMOTL2Q9Y2J4 779 aa13.86□□□□□ -0.19
GINS3-201ENST00000318129 PTPRUQ92729 1446 aa13.85□□□□□ -0.19
GINS3-201ENST00000318129 NEFLP07196 543 aa13.84□□□□□ -0.19
GINS3-201ENST00000318129 HSPA2P54652 639 aa13.84□□□□□ -0.19
GINS3-201ENST00000318129 WAPLQ7Z5K2 1190 aa13.84□□□□□ -0.19
GINS3-201ENST00000318129 PTCH1Q13635 1447 aa13.83□□□□□ -0.19
GINS3-201ENST00000318129 SAFB2Q14151 953 aaKnown RBP eCLIP13.83□□□□□ -0.2
GINS3-201ENST00000318129 ROBO2Q9HCK4 1378 aa13.82□□□□□ -0.2
GINS3-201ENST00000318129 CHD2O14647 1828 aaKnown RBP13.82□□□□□ -0.2
GINS3-201ENST00000318129 DEKP35659 375 aaKnown RBP13.82□□□□□ -0.2
GINS3-201ENST00000318129 XRN1Q8IZH2 1706 aaKnown RBP13.82□□□□□ -0.2
GINS3-201ENST00000318129 MINK1Q8N4C8 1332 aaPredicted RBP13.82□□□□□ -0.2
GINS3-201ENST00000318129 PLEKHH1Q9ULM0 1364 aa13.81□□□□□ -0.2
GINS3-201ENST00000318129 KCNA6P17658 529 aa13.81□□□□□ -0.2
GINS3-201ENST00000318129 ANO8Q9HCE9 1232 aaPredicted RBP13.81□□□□□ -0.2
GINS3-201ENST00000318129 TULP4Q9NRJ4 1543 aa13.79□□□□□ -0.2
GINS3-201ENST00000318129 CDK19Q9BWU1 502 aa13.79□□□□□ -0.2
GINS3-201ENST00000318129 SRPK2P78362 688 aaKnown RBP13.78□□□□□ -0.2
GINS3-201ENST00000318129 ATAD2Q6PL18 1390 aa13.78□□□□□ -0.2
GINS3-201ENST00000318129 WASLO00401 505 aaPredicted RBP13.78□□□□□ -0.2
GINS3-201ENST00000318129 ANP32CO43423 234 aa13.78□□□□□ -0.2
GINS3-201ENST00000318129 STRCQ7RTU9 1775 aa13.77□□□□□ -0.2
GINS3-201ENST00000318129 NINLQ9Y2I6 1382 aa13.77□□□□□ -0.2
GINS3-201ENST00000318129 DMRT2Q9Y5R5 561 aa13.77□□□□□ -0.21
GINS3-201ENST00000318129 NWD1Q149M9 1564 aa13.76□□□□□ -0.21
GINS3-201ENST00000318129 ADGRB2O60241 1585 aa13.76□□□□□ -0.21
GINS3-201ENST00000318129 PANK3Q9H999 370 aa13.76□□□□□ -0.21
GINS3-201ENST00000318129 CABP2Q9NPB3 220 aa13.76□□□□□ -0.21
GINS3-201ENST00000318129 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.74□□□□□ -0.21
GINS3-201ENST00000318129 NKTRP30414 1462 aaKnown RBP13.74□□□□□ -0.21
GINS3-201ENST00000318129 MYOM1P52179 1685 aa13.74□□□□□ -0.21
GINS3-201ENST00000318129 TMC1Q8TDI8 760 aa13.74□□□□□ -0.21
GINS3-201ENST00000318129 PER1O15534 1290 aaPredicted RBP13.73□□□□□ -0.21
GINS3-201ENST00000318129 PROSER2Q86WR7 435 aaPredicted RBP13.72□□□□□ -0.21
GINS3-201ENST00000318129 SLC12A5Q9H2X9 1139 aa13.72□□□□□ -0.21
GINS3-201ENST00000318129 KNSTRNQ9Y448 316 aa13.72□□□□□ -0.21
GINS3-201ENST00000318129 ERICH6BQ5W0A0 696 aa13.71□□□□□ -0.21
GINS3-201ENST00000318129 NUDT16Q96DE0 195 aaKnown RBP13.71□□□□□ -0.21
GINS3-201ENST00000318129 NCOA3Q9Y6Q9 1424 aa13.7□□□□□ -0.22
GINS3-201ENST00000318129 TERF2IPQ9NYB0 399 aa13.7□□□□□ -0.22
GINS3-201ENST00000318129 CCDC61Q9Y6R9 512 aa13.7□□□□□ -0.22
GINS3-201ENST00000318129 KTN1Q86UP2 1357 aaKnown RBP13.7□□□□□ -0.22
GINS3-201ENST00000318129 ANKRD36BQ8N2N9 1353 aa13.69□□□□□ -0.22
GINS3-201ENST00000318129 ADGRL3Q9HAR2 1447 aa13.69□□□□□ -0.22
GINS3-201ENST00000318129 PRKRIP1Q9H875 184 aaPredicted RBP13.69□□□□□ -0.22
GINS3-201ENST00000318129 HDGFL2Q7Z4V5 671 aaPredicted RBP13.68□□□□□ -0.22
GINS3-201ENST00000318129 C14orf37Q86TY3 774 aa13.68□□□□□ -0.22
GINS3-201ENST00000318129 CABP1Q9NZU7 370 aa13.68□□□□□ -0.22
GINS3-201ENST00000318129 CCER2I3L3R5 266 aa13.67□□□□□ -0.22
GINS3-201ENST00000318129 RALBP1Q15311 655 aa13.67□□□□□ -0.22
GINS3-201ENST00000318129 ANKARQ7Z5J8 1434 aa13.67□□□□□ -0.22
GINS3-201ENST00000318129 NPC1L1Q9UHC9 1359 aa13.67□□□□□ -0.22
GINS3-201ENST00000318129 ATP7BP35670 1465 aa13.67□□□□□ -0.22
GINS3-201ENST00000318129 CDC42BPGQ6DT37 1551 aa13.67□□□□□ -0.22
GINS3-201ENST00000318129 PPIP5K1Q6PFW1 1433 aa13.66□□□□□ -0.22
GINS3-201ENST00000318129 SALL2Q9Y467 1007 aaPredicted RBP13.66□□□□□ -0.22
GINS3-201ENST00000318129 CARD14Q9BXL6 1004 aa13.66□□□□□ -0.22
GINS3-201ENST00000318129 C19orf44Q9H6X5 657 aa13.66□□□□□ -0.22
GINS3-201ENST00000318129 NALCNQ8IZF0 1738 aa13.66□□□□□ -0.22
GINS3-201ENST00000318129 STRCP1A6NGW2 1772 aa13.66□□□□□ -0.22
GINS3-201ENST00000318129 PRR36Q9H6K5 1346 aa13.65□□□□□ -0.22
GINS3-201ENST00000318129 PLEKHG3A1L390 1219 aa13.65□□□□□ -0.22
GINS3-201ENST00000318129 ZNF692Q9BU19 519 aaPredicted RBP13.65□□□□□ -0.22
GINS3-201ENST00000318129 FMN2Q9NZ56 1722 aa13.65□□□□□ -0.22
GINS3-201ENST00000318129 AMER1Q5JTC6 1135 aaPredicted RBP13.65□□□□□ -0.22
GINS3-201ENST00000318129 TMEM94Q12767 1356 aa13.64□□□□□ -0.23
GINS3-201ENST00000318129 ITSN1Q15811 1721 aa13.64□□□□□ -0.23
GINS3-201ENST00000318129 A0A1W2PP64 1363 aa13.64□□□□□ -0.23
GINS3-201ENST00000318129 AEBP2Q6ZN18 517 aaPredicted RBP13.64□□□□□ -0.23
GINS3-201ENST00000318129 NSD3Q9BZ95 1437 aa13.63□□□□□ -0.23
GINS3-201ENST00000318129 CGNL1Q0VF96 1302 aa13.63□□□□□ -0.23
GINS3-201ENST00000318129 CD163L1Q9NR16 1453 aa13.63□□□□□ -0.23
GINS3-201ENST00000318129 TOPAZ1Q8N9V7 1692 aa13.63□□□□□ -0.23
GINS3-201ENST00000318129 RBM33Q96EV2 1170 aaKnown RBP13.63□□□□□ -0.23
GINS3-201ENST00000318129 USP32Q8NFA0 1604 aa13.63□□□□□ -0.23
GINS3-201ENST00000318129 CPSF1Q10570 1443 aaKnown RBP13.62□□□□□ -0.23
GINS3-201ENST00000318129 PARD3Q8TEW0 1356 aa13.62□□□□□ -0.23
GINS3-201ENST00000318129 DCCP43146 1447 aa13.62□□□□□ -0.23
GINS3-201ENST00000318129 CC2D1BQ5T0F9 858 aaKnown RBP13.62□□□□□ -0.23
GINS3-201ENST00000318129 ZNF335Q9H4Z2 1342 aaPredicted RBP13.62□□□□□ -0.23
GINS3-201ENST00000318129 NSD2O96028 1365 aa13.62□□□□□ -0.23
GINS3-201ENST00000318129 NUTM2FA1L443 756 aa13.61□□□□□ -0.23
GINS3-201ENST00000318129 ATF3P18847 181 aa13.61□□□□□ -0.23
GINS3-201ENST00000318129 LRRC7Q96NW7 1537 aa13.6□□□□□ -0.23
GINS3-201ENST00000318129 MSH6P52701 1360 aa13.6□□□□□ -0.23
GINS3-201ENST00000318129 ACEP12821 1306 aa13.6□□□□□ -0.23
GINS3-201ENST00000318129 MYBBP1AQ9BQG0 1328 aaKnown RBP13.6□□□□□ -0.23
GINS3-201ENST00000318129 AKAP12Q02952 1782 aa13.59□□□□□ -0.23
GINS3-201ENST00000318129 CNGB1Q14028 1251 aaPredicted RBP13.59□□□□□ -0.23
GINS3-201ENST00000318129 CADPS2Q86UW7 1296 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms